BDGP Sequence Production Resources |
Search the DGRC for GH01635
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 16 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | CG9836-RA |
Protein status: | GH01635.pep: gold |
Preliminary Size: | 937 |
Sequenced Size: | 960 |
Gene | Date | Evidence |
---|---|---|
CG9836 | 2001-01-01 | Release 2 assignment |
CG9836 | 2001-09-19 | Blastp of sequenced clone |
CG9836 | 2003-01-01 | Sim4 clustering to Release 3 |
CG9836 | 2008-04-29 | Release 5.5 accounting |
CG9836 | 2008-08-15 | Release 5.9 accounting |
CG9836 | 2008-12-18 | 5.12 accounting |
960 bp (960 high quality bases) assembled on 2001-09-19
GenBank Submission: AY060228
> GH01635.complete AGCTGTTTCTAACACGCAGTTGCCTGTGTTTTTTCGATCTCTTTGAATTT CACAACAATTCTTCATTAAATTGATTTATTTAATTTAAATATGTCCCTGG TGCGAAACTCCTCCCGGTTGCTGCGATCGCAGCTGAAGCGCGTACAAAGT GTCCCGGTGGCATTGTATCATGAAAATGTCGTTGAGCACTACGAAAACCC GCGCAACGTGGGATCTTTGGACAAGAAGGATGTCACTGTGGGCACCGGCT TGGTCGGAGCACCAGCCTGCGGCGATGTGATGAAACTGCAGATCAAGGTG GACGAGAACGGCAAGATAGTGGACGCCAAGTTCAAGACCTTCGGCTGTGG ATCGGCCATTGCCAGCAGCTCCCTGGCCACCGAGTGGGTGAAGGGCAAGT CCATCGACGAGGCCGGAAAGCTGAAGAATACGGACATCGCCAAGGAGCTG CGTCTGCCGCCCGTCAAGCTGCATTGCTCCATGCTGGCCGAGGATGCCAT CAAGGCGGCCCTGGCTGACTACAAGGTCAAGCAGCAGAAGAAGGTGGCCA ACTGAGAGGCGGAACGGAATCTGTGAATGTAGTGGAGCGTTTCTCTGAAC AACTACTAAAAAAAAAACAACTATAAGTACTCTACCATACAATACAATAC CATATACTATATATTACTTGGCATTAGGTCGTAGTATGCGATTATTGTTC GCTAGAGCTCTGTGAGTGATTGGCCGCGTGACTGCTGATAAGTGCATAGA AGTTTAGGAATCGTCTGTCATTGATACTAAAGGATAGCTGGAACTGATCT TGTATGAATGCATATGCACGTGTGTGTTTTGTAGGGGAATTCTAAGTAGT CCCGAGAGCTAATTAAATTTTCCGTTCTGTTATGCGAAATACAAGCTTGT GTCGAAAACAAATAAAGCGTTCCCGTTGGAATAAAAAATAAAAAAAAAAA AAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9836-RA | 1006 | CG9836-RA | 13..952 | 1..940 | 4700 | 100 | Plus |
CG9836.b | 951 | CG9836.b | 13..945 | 1..940 | 4570 | 99.2 | Plus |
CG9836.c | 1018 | CG9836.c | 13..730 | 1..718 | 3590 | 100 | Plus |
CG9836.c | 1018 | CG9836.c | 741..964 | 717..940 | 1120 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 4649220..4649760 | 718..178 | 2690 | 99.8 | Minus |
chr3R | 27901430 | chr3R | 4648808..4649029 | 939..718 | 1110 | 100 | Minus |
chr3R | 27901430 | chr3R | 4649942..4650120 | 179..1 | 895 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\Uvir | 6564 | Dvir\Uvir VIRUVIR 6564bp | 4499..4661 | 516..667 | 122 | 59.4 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 4648808..4649028 | 719..939 | 100 | <- | Minus |
chr3R | 4649220..4649760 | 178..718 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 1..465 | 91..555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 1..465 | 91..555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 1..465 | 91..555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 1..465 | 91..555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 1..465 | 91..555 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 13..951 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 13..951 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 17..955 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 13..951 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG9836-RA | 17..955 | 1..939 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8822849..8823069 | 719..939 | 100 | <- | Minus |
3R | 8823261..8823801 | 178..718 | 100 | <- | Minus |
3R | 8823985..8824161 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8822849..8823069 | 719..939 | 100 | <- | Minus |
3R | 8823261..8823801 | 178..718 | 100 | <- | Minus |
3R | 8823985..8824161 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8822849..8823069 | 719..939 | 100 | <- | Minus |
3R | 8823261..8823801 | 178..718 | 100 | <- | Minus |
3R | 8823985..8824161 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 4648571..4648791 | 719..939 | 100 | <- | Minus |
arm_3R | 4648983..4649523 | 178..718 | 100 | <- | Minus |
arm_3R | 4649707..4649883 | 1..177 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 8563680..8563900 | 719..939 | 100 | <- | Minus |
3R | 8564092..8564632 | 178..718 | 100 | <- | Minus |
3R | 8564816..8564992 | 1..177 | 100 | Minus |
Translation from 90 to 554
> GH01635.pep MSLVRNSSRLLRSQLKRVQSVPVALYHENVVEHYENPRNVGSLDKKDVTV GTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWV KGKSIDEAGKLKNTDIAKELRLPPVKLHCSMLAEDAIKAALADYKVKQQK KVAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF16826-PA | 154 | GF16826-PA | 1..154 | 1..154 | 791 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG17414-PA | 154 | GG17414-PA | 1..154 | 1..154 | 800 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22664-PA | 154 | GH22664-PA | 1..154 | 1..154 | 776 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
IscU-PA | 154 | CG9836-PA | 1..154 | 1..154 | 776 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22712-PA | 154 | GI22712-PA | 1..154 | 1..154 | 759 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22284-PA | 154 | GL22284-PA | 1..154 | 1..154 | 777 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA22065-PA | 154 | GA22065-PA | 1..154 | 1..154 | 777 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26300-PA | 154 | GM26300-PA | 1..154 | 1..154 | 805 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23436-PA | 154 | GJ23436-PA | 1..154 | 1..154 | 764 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK10917-PA | 152 | GK10917-PA | 1..151 | 1..151 | 788 | 98.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24814-PA | 154 | GE24814-PA | 1..154 | 1..154 | 801 | 98.7 | Plus |
Translation from 90 to 554
> GH01635.hyp MSLVRNSSRLLRSQLKRVQSVPVALYHENVVEHYENPRNVGSLDKKDVTV GTGLVGAPACGDVMKLQIKVDENGKIVDAKFKTFGCGSAIASSSLATEWV KGKSIDEAGKLKNTDIAKELRLPPVKLHCSMLAEDAIKAALADYKVKQQK KVAN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG9836-PA | 154 | CG9836-PA | 1..154 | 1..154 | 776 | 100 | Plus |