BDGP Sequence Production Resources |
Search the DGRC for GH01721
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 17 |
Well: | 21 |
Vector: | pOT2 |
Associated Gene/Transcript | rau-RA |
Protein status: | GH01721.pep: gold |
Preliminary Size: | 2208 |
Sequenced Size: | 2217 |
Gene | Date | Evidence |
---|---|---|
CG8965 | 2001-01-01 | Release 2 assignment |
CG8965 | 2001-07-04 | Blastp of sequenced clone |
CG8965 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8965 | 2008-04-29 | Release 5.5 accounting |
CG8965 | 2008-08-15 | Release 5.9 accounting |
CG8965 | 2008-12-18 | 5.12 accounting |
2217 bp (2217 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047509
> GH01721.complete CACTGCCGAGTGCGGTACTCAATCTACATTAGCTCCGCTCGAAAATTTCC AATTCTTAGTGAACTGGCTAACGGTAGCGAGCCTATTCGAACGAAAGTGA ATGTGCGTCCAGATCTAAAATAAAATTGGTACGAAAGCCAAAGGAATATA CATATGTACAAAAAGTGAACAAATTCGGATAGAAACTCAAAGTGCAACGC TAAAATAAAAATCAGTGCAGCTGCTTCCTGAGTGCACCTGTTTCCCCAGC AGGGAGCACGTACGCATACGCACCTTTGGATACGCGAAGAAATGCGAAGT GGCGTAGAGTGCTTGATAACTTAATGCCAAGCAGCCAAAGGGCCCTAAAA GCGGCAGCCGAAGAAAAACGACGCGACCTTGTCTTGTCTTCGCACTCCGG ACTTCTTATACCGCCATCCATCAAAGTCTCGGGCCTTAAGGTCTTGGGAT TACACACAAATCACATTTGGATACTACAAATCATACGCTAGAAGATGCTG AAGCACGTGCAAATCTCGCCGCTGCGAAATCGATCCGATTCGGTGTCCCT TCGCTCCTCCAGCCACGCCTCCTCGTGCGCCAGCTCCATGTGCGGCAGTC CGGAGCCTCCGGCGGAGCTGCAGAGAACACCCTCGAGGGCCTCCAGTTAC TCCAGCCTCAACGAGCAGCTGCCACAGACCACAATCAAGGTGTACACAAA CTGCCTGAAGATCGACATCGAGTACAAGACCCTTGGAATCCAGTGGGACA CTACAAGCAAGGAGGTTATTGGCCAGCTGCTAAGACGCCTCAAGATGCGA CATCGCGATCCACGCCTGTTCTACCTATCCATGGAGGTAGCTGTGCGTCG GGCTGGAGTGAAGACCATCTTGGTGCTGGACGACGACACCCGGCCGGCCA TCATGCAGGCCTGTCATCCGAAGGGCGAGTCCCGATTCTGTCTGCAGCTA AAACCAGGTGGCCTGATCCGCGTCCACACCTCCGCGCTGCAGCCCAGCTC TCAGTACAAGTCGCTGGTCATCAGCGAGGAGACCACCTGTGACGAGCTGC TGCACCTGCTCCTCGGCTGTTACAGTTCACCCGAGCCGGTCGAGAACTTC TCGCTGTACGAGGTGTGTCCCGGCCAGGAGTGTCAGCGAAAATTGCACCC GGACGACCTTCCACTGCGCACTCAGATGGAGCGGATGAAGCGGGGCGAAG GCTGTCACTTCCTGGTGCGCCGAACGCCCAATTACGCACGCCGGCGCCAG CTGTTGGCCAACCTAAACGAGGCAATTGGACAGGCCGCGGAGGCGGCAGA GGATGCAACCAGTCTCCTGGAGCTCTCCTTGGAGTCGGATCTGTCGCTCT CCGAGGATCTGCGAAGCTGCAGCAGCAGCGAGGATGCCGAGGATGAAGAC GAGTGTGCTAGCAGTTCTGGCTCCTCGGATAATTCCACAGAATGTGCCCT ACGCCGGGACTTTTACGTCCACACCACGCCCGCAGCTCCTGCTCCAGTTG TGCCCCAAGTGGCGGTGTCCGTGTCACCCGCCCGAGTCTACAGCCCCGTG TACAACATACGCGAGATTCGAACCGCCTCGCACTCCTTCTCCTCGCTGGG GAAGGACAAGAAGCTGCTTGACATCCACATGAACGCCCGCTTTGCGTCCG GAGGAGTCTACGGCAGACTTATGCCTGTGGCGGAGACGGAGACCCAGGAC ATGAACGGCAATACCAGTACCAAACTCACGGCGGAGGCCGTCAACAACAA CCCGGCCAAGGGACTGGGACACTTTGTCTACCTGTAGCGATTGGGTCAGT GGGAGTGGAACCTGTACAAAGGACGAGTATGCCACTAGGATCGTCTGATG AGACCCAAAAATTAGAAAAGAAATCGAGTACCGTTTGGACCAAAGATGCA TTTGTAGTTTAAGCCGTTAGAGTGGGAAATGTAAATAGGAAATATGCCTG CGAGTAATGTATCCTAAGATTAGTTACGATTAGTTTAGTTTTTCCTTACG CTACAAAAGATACTTTGTCCCTAGTGTAATGCAAAGAAACCATCTGCTAA CAATCCCAAATGAAAGGAGTCTATAGCTTAACGCTTTAGTCCCGCAACTA AAGCTTCGATAAGAGTATGAATCTGAATAGCTTGTGGCTAACATTCGTGT AAAAACCAAAAGATATTGTAATAATAAGAACTAATTATGTACAACCTGAA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8965-RA | 2333 | CG8965-RA | 60..2258 | 1..2199 | 10995 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 5858820..5860231 | 2198..787 | 7060 | 100 | Minus |
chr2L | 23010047 | chr2L | 5878039..5878532 | 494..1 | 2470 | 100 | Minus |
chr2L | 23010047 | chr2L | 5860476..5860660 | 677..493 | 925 | 100 | Minus |
chr2L | 23010047 | chr2L | 5860303..5860418 | 787..672 | 580 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5859768..5861180 | 2199..787 | 7065 | 100 | Minus |
2L | 23513712 | 2L | 5878988..5879481 | 494..1 | 2470 | 100 | Minus |
2L | 23513712 | 2L | 5861425..5861609 | 677..493 | 925 | 100 | Minus |
2L | 23513712 | 2L | 5861252..5861367 | 787..672 | 580 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 5859768..5861180 | 2199..787 | 7065 | 100 | Minus |
2L | 23513712 | 2L | 5878988..5879481 | 494..1 | 2470 | 100 | Minus |
2L | 23513712 | 2L | 5861425..5861609 | 677..493 | 925 | 100 | Minus |
2L | 23513712 | 2L | 5861252..5861367 | 787..672 | 580 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 5860303..5860412 | 678..787 | 100 | <- | Minus |
chr2L | 5860476..5860658 | 495..677 | 100 | <- | Minus |
chr2L | 5858820..5860230 | 788..2198 | 100 | <- | Minus |
chr2L | 5878039..5878532 | 1..494 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8965-RA | 1..1293 | 495..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8965-RA | 1..1293 | 495..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8965-RA | 1..1293 | 495..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8965-RA | 1..1293 | 495..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rau-RA | 1..1293 | 495..1787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8965-RA | 1..2198 | 1..2198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8965-RA | 1..2198 | 1..2198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8965-RA | 18..2215 | 1..2198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8965-RA | 1..2198 | 1..2198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
rau-RA | 18..2215 | 1..2198 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5859769..5861179 | 788..2198 | 100 | <- | Minus |
2L | 5861252..5861361 | 678..787 | 100 | <- | Minus |
2L | 5861425..5861607 | 495..677 | 100 | <- | Minus |
2L | 5878988..5879481 | 1..494 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5859769..5861179 | 788..2198 | 100 | <- | Minus |
2L | 5861252..5861361 | 678..787 | 100 | <- | Minus |
2L | 5861425..5861607 | 495..677 | 100 | <- | Minus |
2L | 5878988..5879481 | 1..494 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5859769..5861179 | 788..2198 | 100 | <- | Minus |
2L | 5861252..5861361 | 678..787 | 100 | <- | Minus |
2L | 5861425..5861607 | 495..677 | 100 | <- | Minus |
2L | 5878988..5879481 | 1..494 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 5861252..5861361 | 678..787 | 100 | <- | Minus |
arm_2L | 5861425..5861607 | 495..677 | 100 | <- | Minus |
arm_2L | 5859769..5861179 | 788..2198 | 100 | <- | Minus |
arm_2L | 5878988..5879481 | 1..494 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 5859769..5861179 | 788..2198 | 100 | <- | Minus |
2L | 5861252..5861361 | 678..787 | 100 | <- | Minus |
2L | 5861425..5861607 | 495..677 | 100 | <- | Minus |
2L | 5878988..5879481 | 1..494 | 100 | Minus |
Translation from 494 to 1786
> GH01721.hyp MLKHVQISPLRNRSDSVSLRSSSHASSCASSMCGSPEPPAELQRTPSRAS SYSSLNEQLPQTTIKVYTNCLKIDIEYKTLGIQWDTTSKEVIGQLLRRLK MRHRDPRLFYLSMEVAVRRAGVKTILVLDDDTRPAIMQACHPKGESRFCL QLKPGGLIRVHTSALQPSSQYKSLVISEETTCDELLHLLLGCYSSPEPVE NFSLYEVCPGQECQRKLHPDDLPLRTQMERMKRGEGCHFLVRRTPNYARR RQLLANLNEAIGQAAEAAEDATSLLELSLESDLSLSEDLRSCSSSEDAED EDECASSSGSSDNSTECALRRDFYVHTTPAAPAPVVPQVAVSVSPARVYS PVYNIREIRTASHSFSSLGKDKKLLDIHMNARFASGGVYGRLMPVAETET QDMNGNTSTKLTAEAVNNNPAKGLGHFVYL*
Translation from 494 to 1786
> GH01721.pep MLKHVQISPLRNRSDSVSLRSSSHASSCASSMCGSPEPPAELQRTPSRAS SYSSLNEQLPQTTIKVYTNCLKIDIEYKTLGIQWDTTSKEVIGQLLRRLK MRHRDPRLFYLSMEVAVRRAGVKTILVLDDDTRPAIMQACHPKGESRFCL QLKPGGLIRVHTSALQPSSQYKSLVISEETTCDELLHLLLGCYSSPEPVE NFSLYEVCPGQECQRKLHPDDLPLRTQMERMKRGEGCHFLVRRTPNYARR RQLLANLNEAIGQAAEAAEDATSLLELSLESDLSLSEDLRSCSSSEDAED EDECASSSGSSDNSTECALRRDFYVHTTPAAPAPVVPQVAVSVSPARVYS PVYNIREIRTASHSFSSLGKDKKLLDIHMNARFASGGVYGRLMPVAETET QDMNGNTSTKLTAEAVNNNPAKGLGHFVYL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14299-PA | 436 | GF14299-PA | 7..436 | 1..430 | 1743 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24279-PA | 438 | GG24279-PA | 9..438 | 1..430 | 2246 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10811-PA | 476 | GH10811-PA | 13..476 | 1..430 | 1558 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
rau-PB | 430 | CG8965-PB | 1..430 | 1..430 | 2213 | 100 | Plus |
rau-PA | 430 | CG8965-PA | 1..430 | 1..430 | 2213 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17320-PA | 497 | GI17320-PA | 17..497 | 1..430 | 1582 | 77 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21441-PA | 457 | GA21441-PA | 12..457 | 1..430 | 1764 | 85.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17992-PA | 430 | GM17992-PA | 1..430 | 1..430 | 2272 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22628-PA | 430 | GD22628-PA | 1..430 | 1..430 | 2262 | 98.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15887-PA | 475 | GJ15887-PA | 18..475 | 1..430 | 1697 | 79.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15415-PA | 457 | GK15415-PA | 11..457 | 1..430 | 1825 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18975-PA | 430 | GE18975-PA | 1..430 | 1..430 | 2278 | 99.1 | Plus |