BDGP Sequence Production Resources |
Search the DGRC for GH01724
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 17 |
Well: | 24 |
Vector: | pOT2 |
Associated Gene/Transcript | p47-RA |
Protein status: | GH01724.pep: gold |
Preliminary Size: | 1411 |
Sequenced Size: | 1422 |
Gene | Date | Evidence |
---|---|---|
CG11139 | 2001-01-01 | Release 2 assignment |
CG11139 | 2001-09-19 | Blastp of sequenced clone |
CG11139 | 2003-01-01 | Sim4 clustering to Release 3 |
p47 | 2008-04-29 | Release 5.5 accounting |
p47 | 2008-08-15 | Release 5.9 accounting |
p47 | 2008-12-18 | 5.12 accounting |
1422 bp (1422 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058260
> GH01724.complete CACTGGTGTGCGTTTTTTGTCAATCATTTGCTGCTGAAAATAAATTAAAA ACACAGGTAAAATGGCCGCGCGCGGCGATTTGATTGCACAGTTCATTGAG ATCACCGGAACCGACGAGAACGTGGCCAGGTTCTACCTGTCCAGCTGCGA CTGGGACATCGAGCACGCGCTGGGCAACTACTGGAGCACCCAGGCGGACC TGCCGGTTCCGGTGCCGACGGTGGGCCACGCGGACAACCCCAAACCAAAG CCGACATCGAGCAGCGGAGCAAGTGCATCGGCATCCGCTGCTGGGGCCAC CAAGAGTGCGGACTCAGCCGTCGCTACCTCGTCAGCTTCGGTGGACATCG CCCCGGCAGCGACCAAGGCCAAGCCAAAATTCGCAACGCTTAGCGACATG TCGAAGGAGTCGTCTAGTGACGATGACCAGCAGGCCTTCTATGCCGGCGG CTCAGATCGCTCCGGTCAGCAAGTGCTGGGCCCGCCCAAGCGCAAGAACT TCCGGGAGCAGCTCACCGACATGATGCGTTCTGCGCAGGAGCAAAACATC GCAGAGGTGGGGCCATCAACCAGCAGCGGCAGTGCCAGCGGAGGATCTGG CGGTGCCGTCTGGGGCCAAGGCATGCGGCTGGGCATGACCGATAATGACC ACACGGCTGTGGGCACCAAAAAACCGGCTGCGACCATCGAAAACAAGCCG GTGGTGGTGCTAAAGCTCTGGAGCCAGGGCTTCTCCATCGATGGCGGTGA GCTTCGTCACTATGACGATCCGCAGAATAAGGAATTCCTAGAGACTGTCA TGCGCGGGGAAATTCCGCAAGAGCTGCTGGAAATGGGGCGCATGGTCAAT GTGGATGTGGAGGACCACCGCCACGAGGACTTCAAACGTCAGCCAGTTCC GCAGACTTTTAAGGGATCGGGCCAGAAGCTGGGCAGTCCCGTGGCCAATT TGGTCACGGAAGCGCCAACAGTTCCAGTGGCATTGTCGCCCGGTGAGGCT GCAAACCAGGAGGCTAGTGCCCGTGATGCCATTAACTTAAATTCCGAAGC ACCGTCCACTACGCTGCAGATTCGCCTAGCGGACGGTTCGCGTCTAGCTG CGCAGTTTAATCTTTCGCACACCGTCTCCGACATTCGTCGTTTCATACAA ACTGCACGCCCTCAGTACTCAACTAGTAATTTCATCCTGGTGTCCTCGTT CCCCACTCGCGAGCTGAGCGACGACAATTCCACCATCGAGAAGGCTGGCC TCAAGAACGCGGCACTCATGCAGCGCCTCAAGTAACTAACTATAAGTCAA GTACGCGTATATGTGCTCTCAGCGATGGGGGGCAAAAACCTATGAAATAA AACTGGATTTGGTGAAGTCGGGAAACCTATTCGGGCCGATCCGATGCCTA TAATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
p47.d | 1880 | p47.d | 602..1844 | 162..1404 | 6215 | 100 | Plus |
p47.b | 1673 | p47.b | 395..1637 | 162..1404 | 6215 | 100 | Plus |
p47.a | 1582 | p47.a | 143..1298 | 1..1156 | 5765 | 99.9 | Plus |
p47.a | 1582 | p47.a | 1312..1563 | 1153..1404 | 1260 | 100 | Plus |
p47.d | 1880 | p47.d | 350..512 | 1..163 | 815 | 100 | Plus |
p47.b | 1673 | p47.b | 143..305 | 1..163 | 815 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 3353132..3353561 | 808..379 | 2135 | 99.8 | Minus |
chr2R | 21145070 | chr2R | 3352685..3353030 | 1152..807 | 1730 | 100 | Minus |
chr2R | 21145070 | chr2R | 3352372..3352623 | 1404..1153 | 1245 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 3353617..3353833 | 378..162 | 1085 | 100 | Minus |
chr2R | 21145070 | chr2R | 3353923..3354085 | 163..1 | 815 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 7465778..7466207 | 808..379 | 2150 | 100 | Minus |
2R | 25286936 | 2R | 7465331..7465676 | 1152..807 | 1730 | 100 | Minus |
2R | 25286936 | 2R | 7465018..7465269 | 1404..1153 | 1260 | 100 | Minus |
2R | 25286936 | 2R | 7466263..7466479 | 378..162 | 1085 | 100 | Minus |
2R | 25286936 | 2R | 7466569..7466731 | 163..1 | 815 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 7466977..7467406 | 808..379 | 2150 | 100 | Minus |
2R | 25260384 | 2R | 7466530..7466875 | 1152..807 | 1730 | 100 | Minus |
2R | 25260384 | 2R | 7466217..7466468 | 1404..1153 | 1260 | 100 | Minus |
2R | 25260384 | 2R | 7467462..7467678 | 378..162 | 1085 | 100 | Minus |
2R | 25260384 | 2R | 7467768..7467930 | 163..1 | 815 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 3352372..3352623 | 1153..1404 | 99 | <- | Minus |
chr2R | 3352685..3353029 | 808..1152 | 100 | <- | Minus |
chr2R | 3353133..3353561 | 379..807 | 99 | <- | Minus |
chr2R | 3353617..3353831 | 164..378 | 100 | <- | Minus |
chr2R | 3353923..3354085 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 1..1224 | 62..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 1..1224 | 62..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 1..1224 | 62..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 1..1224 | 62..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 1..1224 | 62..1285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 1..1404 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 1..1404 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 29..1432 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 1..1404 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
p47-RA | 29..1432 | 1..1404 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7466263..7466477 | 164..378 | 100 | <- | Minus |
2R | 7466569..7466731 | 1..163 | 100 | Minus | |
2R | 7465018..7465269 | 1153..1404 | 100 | <- | Minus |
2R | 7465331..7465675 | 808..1152 | 100 | <- | Minus |
2R | 7465779..7466207 | 379..807 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7466263..7466477 | 164..378 | 100 | <- | Minus |
2R | 7466569..7466731 | 1..163 | 100 | Minus | |
2R | 7465018..7465269 | 1153..1404 | 100 | <- | Minus |
2R | 7465331..7465675 | 808..1152 | 100 | <- | Minus |
2R | 7465779..7466207 | 379..807 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7466263..7466477 | 164..378 | 100 | <- | Minus |
2R | 7466569..7466731 | 1..163 | 100 | Minus | |
2R | 7465018..7465269 | 1153..1404 | 100 | <- | Minus |
2R | 7465331..7465675 | 808..1152 | 100 | <- | Minus |
2R | 7465779..7466207 | 379..807 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 3352836..3353180 | 808..1152 | 100 | <- | Minus |
arm_2R | 3352523..3352774 | 1153..1404 | 100 | <- | Minus |
arm_2R | 3353284..3353712 | 379..807 | 100 | <- | Minus |
arm_2R | 3353768..3353982 | 164..378 | 100 | <- | Minus |
arm_2R | 3354074..3354236 | 1..163 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 7466217..7466468 | 1153..1404 | 100 | <- | Minus |
2R | 7466530..7466874 | 808..1152 | 100 | <- | Minus |
2R | 7466978..7467406 | 379..807 | 100 | <- | Minus |
2R | 7467462..7467676 | 164..378 | 100 | <- | Minus |
2R | 7467768..7467930 | 1..163 | 100 | Minus |
Translation from 61 to 1284
> GH01724.hyp MAARGDLIAQFIEITGTDENVARFYLSSCDWDIEHALGNYWSTQADLPVP VPTVGHADNPKPKPTSSSGASASASAAGATKSADSAVATSSASVDIAPAA TKAKPKFATLSDMSKESSSDDDQQAFYAGGSDRSGQQVLGPPKRKNFREQ LTDMMRSAQEQNIAEVGPSTSSGSASGGSGGAVWGQGMRLGMTDNDHTAV GTKKPAATIENKPVVVLKLWSQGFSIDGGELRHYDDPQNKEFLETVMRGE IPQELLEMGRMVNVDVEDHRHEDFKRQPVPQTFKGSGQKLGSPVANLVTE APTVPVALSPGEAANQEASARDAINLNSEAPSTTLQIRLADGSRLAAQFN LSHTVSDIRRFIQTARPQYSTSNFILVSSFPTRELSDDNSTIEKAGLKNA ALMQRLK*
Translation from 61 to 1284
> GH01724.pep MAARGDLIAQFIEITGTDENVARFYLSSCDWDIEHALGNYWSTQADLPVP VPTVGHADNPKPKPTSSSGASASASAAGATKSADSAVATSSASVDIAPAA TKAKPKFATLSDMSKESSSDDDQQAFYAGGSDRSGQQVLGPPKRKNFREQ LTDMMRSAQEQNIAEVGPSTSSGSASGGSGGAVWGQGMRLGMTDNDHTAV GTKKPAATIENKPVVVLKLWSQGFSIDGGELRHYDDPQNKEFLETVMRGE IPQELLEMGRMVNVDVEDHRHEDFKRQPVPQTFKGSGQKLGSPVANLVTE APTVPVALSPGEAANQEASARDAINLNSEAPSTTLQIRLADGSRLAAQFN LSHTVSDIRRFIQTARPQYSTSNFILVSSFPTRELSDDNSTIEKAGLKNA ALMQRLK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13680-PA | 401 | GF13680-PA | 1..401 | 1..407 | 1735 | 83.7 | Plus |
Dana\GF11253-PA | 365 | GF11253-PA | 136..351 | 183..406 | 384 | 38.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10746-PA | 407 | GG10746-PA | 1..407 | 1..407 | 1871 | 95.6 | Plus |
Dere\GG19933-PA | 353 | GG19933-PA | 7..335 | 8..406 | 400 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20600-PA | 403 | GH20600-PA | 1..403 | 1..407 | 1609 | 76.9 | Plus |
Dgri\GH20898-PA | 359 | GH20898-PA | 151..345 | 214..406 | 393 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
p47-PA | 407 | CG11139-PA | 1..407 | 1..407 | 2072 | 100 | Plus |
CG42383-PA | 353 | CG4556-PA | 7..335 | 8..406 | 396 | 29.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19799-PA | 412 | GI19799-PA | 1..412 | 1..407 | 1607 | 77.9 | Plus |
Dmoj\GI18908-PA | 365 | GI18908-PA | 57..351 | 106..406 | 413 | 34.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20122-PA | 394 | GL20122-PA | 1..394 | 1..407 | 1529 | 77.2 | Plus |
Dper\GL20445-PA | 344 | GL20445-PA | 113..331 | 183..407 | 409 | 38 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10787-PA | 394 | GA10787-PA | 1..394 | 1..407 | 1529 | 77.2 | Plus |
Dpse\GA18254-PA | 344 | GA18254-PA | 113..331 | 183..407 | 402 | 37.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20792-PA | 234 | GM20792-PA | 1..234 | 1..238 | 1213 | 97.1 | Plus |
Dsec\GM20793-PA | 150 | GM20793-PA | 1..150 | 258..407 | 791 | 100 | Plus |
Dsec\GM11836-PA | 353 | GM11836-PA | 7..335 | 8..406 | 391 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10253-PA | 192 | GD10253-PA | 102..192 | 317..407 | 460 | 98.9 | Plus |
Dsim\GD24956-PA | 353 | GD24956-PA | 7..335 | 8..406 | 390 | 29 | Plus |
Dsim\GD10253-PA | 192 | GD10253-PA | 1..63 | 1..63 | 352 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18457-PA | 409 | GJ18457-PA | 1..409 | 1..407 | 1635 | 78.7 | Plus |
Dvir\GJ20732-PA | 362 | GJ20732-PA | 7..350 | 8..406 | 421 | 29.1 | Plus |