Clone GH01761 Report

Search the DGRC for GH01761

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:17
Well:61
Vector:pOT2
Associated Gene/TranscriptCG33191-RA
Protein status:GH01761.pep: gold
Preliminary Size:1699
Sequenced Size:1566

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9808 2001-01-01 Release 2 assignment
CG33191 2001-07-04 Blastp of sequenced clone
CG33191 2008-04-29 Release 5.5 accounting
CG33191 2008-08-15 Release 5.9 accounting
CG33191 2008-12-18 5.12 accounting

Clone Sequence Records

GH01761.complete Sequence

1566 bp (1566 high quality bases) assembled on 2001-07-04

GenBank Submission: AY047511

> GH01761.complete
CACAATCGAGCAGGCAACACACACTTTAAAATTTAATGTGAGTTCAGAGC
TTGATTTGGGGAAAACAGTTCAAGCTCTTTAAGCGTGATGGACGAGGAAT
TCTCTAATCAGCCCATCGATCCAAGCATCGCTCGGAGTGACTACTCCCGG
AGTCATTTCGTTAACCAGAGCTCCATGACATTGAGTCGCGGATTGGACTC
CACCCGACTGCTTTTCGTAGGCGAAAACTTCCAGCAGACGCGCAGCGAAC
AGGACTTATTTTACGACTGTCAAGGTCCGGGTGAGGACTCGCCAAAGGAG
GGCCGTAGTGCCACCAGCCGGTGCAAGTTCGATGATCCGGCTGCGATACG
GGATGCCCTGGAACGGGCGGCCAATGCCACACAGATGCTACTCAAGAATT
TTGACAAGTCAGGTGGTTGGAATCAGCCATGTGCCGTCACCCTGGAGTTG
ACCGCTCGGTTGGTGGACCCCAAGAAGGGTCGCGCTGGTTGTCCGTTGCA
CGGAAAGCCCGTCACCGTCCAGATGCCGCTGGAGTTCAATCCGCAGAGCG
GCAAGATGGTCAAGTGTCAGCAAAAGAAACAACCGGTCACCAGGCATCGC
AAAGAGTCCATCTGCCAGTGCCGCTCGCAGCAGTATATGCGTTCCGGTCC
AAGGGCTCCAAAGCCCAGCTCAGGTAAATCCGCCAGCAAACACTTTCGTC
CATGTGCATCGCAACAGCTAGCCGAAGGGTCCGCCAGTTCGGTATACATA
GGAAGCTGTGGGGATTCAACATCTCAGTGTAACCGTTGCACTCCGGCCAC
ATGTTGCCGCTGGCACGACCCGGGGGCACGGGAGGTCATCTCAATCTCCT
GCCTGACCTTGCCGGATATCGAATCAGAGCTCACTCTTACCCCAGTGCCT
GAGCCACTGCCAATTGAAGAACCGTTGGTGGAGATAGAACCAACGGCCCC
GAAGGAGCACTTGATAATCTATGCTCCAGAGCCGGAACACCCGATCACCG
AGTCGGATGAATCCGATGAGCTCTTGTCTAGCGAGCAGGAGATGTTAGGA
CCGCAGCCGGAAGAAGAAATGGGACCGCCGCCGCCGGAAAGATCGCCGGG
AAGCAAGCGGTACTACCTTGCCCTGCCTCAAAACAAGGAGTTCTCCAACT
GTTCGCCGTGCCGTTTCGATCCCAGTCCTATTATGGACGAGGAAGGCAAT
GTGTTTTGTCCCGGCAACTGTGGCTGCTGCATGTGTCCGTGGAAGCAACG
CTCCTTTGCCCCAAACCAGCAGCACACCAATGTCAAGGTTTGCCGATGCG
TACAGCGCGGCACCATCTTCACTAAGTTCGAGGATCGGGAGGTCTGCAGC
CAGACCTCCTACTTCGATTTTTGTCCGTGCCGCGAAAAGGCGGAGGCCAA
GTTCTTAGAATTGTACCACGCTGAAATGTGGTCCCGTCCGGAAATCACGC
GGGGTCGCGAGATCCAACTCAATGAGATCAAGGAACTGCTCGTACCCACG
AGCCATCCAATCGAATAAAATGTGTTTGCTCACCGAATCAAATCGAAAAA
AAAAAAAAAAAAAAAA

GH01761.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:38:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG33191-RA 1547 CG33191-RA 1..1547 1..1547 7735 100 Plus
Pif1B-RB 4148 Pif1B-RB 9..681 1..673 3365 100 Plus
nc_15414.a 491 nc_15414.a 144..491 1192..1539 1740 100 Plus
nc_15414.a 491 nc_15414.a 1..144 934..1077 720 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 03:22:38
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 4604352..4605896 1545..1 7725 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:26:39 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 03:22:36
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8778377..8779923 1547..1 7735 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:59:58
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 8519208..8520754 1547..1 7735 100 Minus
Blast to na_te.dros performed on 2019-03-16 03:22:37 has no hits.

GH01761.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 03:23:27 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 4604352..4605896 1..1545 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:04:56 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1431 88..1518 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:30:15 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1431 88..1518 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:57:28 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1431 88..1518 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:03:44 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1431 88..1518 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 05:36:39 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1431 88..1518 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:31:00 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1545 1..1545 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:30:15 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1545 1..1545 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:57:28 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1545 1..1545 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:03:44 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1545 1..1545 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 05:36:39 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
CG33191-RA 1..1545 1..1545 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:23:27 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8778379..8779923 1..1545 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:23:27 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8778379..8779923 1..1545 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 03:23:27 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8778379..8779923 1..1545 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:57:28 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4604101..4605645 1..1545 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:41:50 Download gff for GH01761.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8519210..8520754 1..1545 100   Minus

GH01761.hyp Sequence

Translation from 87 to 1517

> GH01761.hyp
MDEEFSNQPIDPSIARSDYSRSHFVNQSSMTLSRGLDSTRLLFVGENFQQ
TRSEQDLFYDCQGPGEDSPKEGRSATSRCKFDDPAAIRDALERAANATQM
LLKNFDKSGGWNQPCAVTLELTARLVDPKKGRAGCPLHGKPVTVQMPLEF
NPQSGKMVKCQQKKQPVTRHRKESICQCRSQQYMRSGPRAPKPSSGKSAS
KHFRPCASQQLAEGSASSVYIGSCGDSTSQCNRCTPATCCRWHDPGAREV
ISISCLTLPDIESELTLTPVPEPLPIEEPLVEIEPTAPKEHLIIYAPEPE
HPITESDESDELLSSEQEMLGPQPEEEMGPPPPERSPGSKRYYLALPQNK
EFSNCSPCRFDPSPIMDEEGNVFCPGNCGCCMCPWKQRSFAPNQQHTNVK
VCRCVQRGTIFTKFEDREVCSQTSYFDFCPCREKAEAKFLELYHAEMWSR
PEITRGREIQLNEIKELLVPTSHPIE*

GH01761.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG33191-PA 476 CG33191-PA 1..476 1..476 2590 100 Plus

GH01761.pep Sequence

Translation from 87 to 1517

> GH01761.pep
MDEEFSNQPIDPSIARSDYSRSHFVNQSSMTLSRGLDSTRLLFVGENFQQ
TRSEQDLFYDCQGPGEDSPKEGRSATSRCKFDDPAAIRDALERAANATQM
LLKNFDKSGGWNQPCAVTLELTARLVDPKKGRAGCPLHGKPVTVQMPLEF
NPQSGKMVKCQQKKQPVTRHRKESICQCRSQQYMRSGPRAPKPSSGKSAS
KHFRPCASQQLAEGSASSVYIGSCGDSTSQCNRCTPATCCRWHDPGAREV
ISISCLTLPDIESELTLTPVPEPLPIEEPLVEIEPTAPKEHLIIYAPEPE
HPITESDESDELLSSEQEMLGPQPEEEMGPPPPERSPGSKRYYLALPQNK
EFSNCSPCRFDPSPIMDEEGNVFCPGNCGCCMCPWKQRSFAPNQQHTNVK
VCRCVQRGTIFTKFEDREVCSQTSYFDFCPCREKAEAKFLELYHAEMWSR
PEITRGREIQLNEIKELLVPTSHPIE*

GH01761.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 14:54:54
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16833-PA 484 GF16833-PA 1..479 1..470 1313 58.5 Plus
Dana\GF16832-PA 176 GF16832-PA 9..127 56..157 144 39.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 14:54:55
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG17421-PA 474 GG17421-PA 1..474 1..476 2082 81.3 Plus
Dere\GG17420-PA 177 GG17420-PA 7..126 54..157 158 40.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 14:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH19337-PA 509 GH19337-PA 300..497 267..467 599 59.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:44:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG33191-PA 476 CG33191-PA 1..476 1..476 2590 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 14:54:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI23947-PA 463 GI23947-PA 28..457 25..470 651 37.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 14:54:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL12128-PA 515 GL12128-PA 368..501 340..473 589 76.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 14:54:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA17355-PA 511 GA17355-PA 364..497 340..473 587 76.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 14:54:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM26311-PA 231 GM26311-PA 1..225 1..225 1119 93.3 Plus
Dsec\GM26312-PA 170 GM26312-PA 2..170 308..476 802 95.9 Plus
Dsec\GM26310-PA 177 GM26310-PA 9..126 56..157 159 41.8 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 14:54:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20843-PA 476 GD20843-PA 1..476 1..476 2254 94.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 14:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ23736-PA 520 GJ23736-PA 358..515 313..470 621 69.6 Plus
Dvir\GJ23736-PA 520 GJ23736-PA 43..208 38..163 311 42.8 Plus
Dvir\GJ23735-PA 190 GJ23735-PA 2..135 55..157 146 33.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 14:55:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK11264-PA 456 GK11264-PA 1..453 1..473 988 49 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 14:55:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE24823-PA 477 GE24823-PA 1..477 1..476 1981 80.9 Plus
Dyak\GE24822-PA 177 GE24822-PA 7..126 54..157 159 40.3 Plus