BDGP Sequence Production Resources |
Search the DGRC for GH01813
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 18 |
Well: | 13 |
Vector: | pOT2 |
Associated Gene/Transcript | wls-RA |
Protein status: | GH01813.pep: gold |
Preliminary Size: | 2017 |
Sequenced Size: | 2584 |
Gene | Date | Evidence |
---|---|---|
CG6210 | 2001-01-01 | Release 2 assignment |
CG6210 | 2001-10-10 | Blastp of sequenced clone |
CG6210 | 2003-01-01 | Sim4 clustering to Release 3 |
wls | 2008-04-29 | Release 5.5 accounting |
wls | 2008-08-15 | Release 5.9 accounting |
wls | 2008-12-18 | 5.12 accounting |
2584 bp (2584 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060600
> GH01813.complete TTGATTCTTGATTAGGTTCTGCATTTTTTCTGTTTGCGGCGGCGGCGGCG CGTTTGAAGTATTGTTTTCAAGTGCAGCAGATTGTTTACTTTACGCCCAC CCAACTGTGTAAACAAATTCAGCGCAGGGCAGTAAACCAGTGAGCTCCAA ACCTTCGAGCAACCAAGATGTCGGGCACCATACTGGAGAACCTGAGTGGC CGCAAGCTGTCCATATTGGTGGCCACTTTGCTGCTCTGCCAGGTGTTGTG CTTCCTGCTGGGCGGTCTGTATGCCCCCCTGCCCGCCGGCCATGTCACCG TGCTGGGATCGCTGTGCCGCGAGGATCACGCCCGCCAGAATGACACCAGT TTCCTGCTGTACTCACGCGGTGCAGGAGCCTGCATCCCAGTGACGCGAGA GGAGGTGGAGCAGGATTCAACAAAGATGGCCAATGAGTTGGTGCACGTTT TCCAGATGCCGCTGCCTCGTGACCTGCGCGACCTGGACTACTCCCGTTGG CAGCAGAATCTGATCGGTGTGCTACAGGTGGAGTTCGGCTATGATTCCTC GTCGGAGCTAAGGGAACCGCCCAGGGAACTTCAGTTGACAATCGACATGC GTCTGGCGTACCGAAATAAGGGGGATCCGGACAACGGCTGGAAGTTGTAC GCCCACGGCGTCGAGCATCGCTACCTGGATTGTGTCACTTCTCATGTGGG TCCCACAGAAACGCTGTACTCATGCGACATGATACCGCTTTTCGAATTGG GCGCATTGCACCACAGCTTCTATCTGCTGAACTTGCGTTTCCCGCTGGAC ACACCGAGCCAAATGAACCTGCAGTTCGGCCATATGCACGATCTCACGCT GACAGCTATTCATCAGAACGGAGGATTCACACAGATTTGGCTGTTGCTTA AGACAATGCTGTTTCCATTCGTAGTGGGCATCATGATATGGTTCTGGAGG CGAGTGCATCTGCTGCAACGATCCCCCGCCCTGCTGGAGTATATGCTTAT CTATTTGGGAGCCGCTCTGACCTTCCTCAATCTACCGCTGGAGTACTTGT CGCTGGTCTACGAGATGCCGTACATGCTGCTGCTAAGTGATATTCGCCAA GGCATCTTTTATGCCATGCTGCTCACTTTCTGGCTGGTCTTCGCCGGTGA ACACATGCTCATTCAGGATGCTCCGAACAAGTCGACCATTCGCTCGCGTT ACTGGAAACATCTCTCGGCCGTCGTCGTGGGCTGCATCTCGCTGTTCGTC TTCGACATCTGCGAAAGGGGCGTGCAGCTACGCAATCCATTCTACTCGAT CTGGACAACGCCGCTGGGCGCTAAGGTGGCCATGACTTTCATTGTTCTGG CCGGAGTTTCGGCAGCCATTTATTTCCTCTTTCTGTGCTACATGATATGG AAGGTGTTTAGGAATATTGGCGACAAGCGCACCTCGCTGCCTTCGATGTC CCAGGCGCGACGACTCCATTATGAAGTTCCTTTAGACCAGAAAGTTGAAG ATTGGGCCGGAATCGTATATTTTTACACAAAAGCTTTTTTTTTTCAATTG CATAAGGCAAATGAAAGTAAAGGTCTTATCTATCGCTTCAAGTTTTTGAT GCTGGCCACCCTTGTATGTGCAGCTCTGACCGTCGCCGGCTTCATTATGG GCCAAATGGCCGAGGGCCAGTGGGACTGGAACGACAATGTGGCAATTCAG CCAACTTCCGCCTTCCTGACCGGCGTCTACGGCATGTGGAACATCTATAT CTTCGCCCTGCTCATCCTGTACGCGCCCAGTCACAAGCAATGGCCGACAA TGCACCACAGTGACGAGACCACACAGTCGAATGAGAATATAGTTGCCTCA GCAGCCAGCGAGGAGATCGAGTTCAGTCACCTGCCATCGGACTCCAATCC CAGCGAGATCTCCTCACTCACCTCGTTCACACGCAAGGTGGCCTTCGATT AGGCGGAAGGACTCGAATTATTGTTTTCTAAAGGGTTGTGTGCCAAACTG AGATCACAATTTGGCCTGCAGCCGCAACGCTTAAAGTGTGTGCTCATTTA ATTACCATAGTCAGTAGCATTTCTTGCCTAGTTTTGCATTCTGTGCATTC GACAACGCGATCAGCATTATTACTTATCATTAACATATAGATTGTCTAGT TTTTCACAGCATGCTCAAAGTGTACGATTTTATCAAATGTATTTTTATGT ATGCGCCTCGGCAGTATTATCTATTGATGTCCAATTGTGCTAGCTTGTAA GTTTTAACATATATTATCAAATAACATTTTATACGTGTAATAACGTTCAA GGGTGGTCCCATTTTTTTTGCTGAACAACATCTTGCCTCGGAAACTATAT GTTTAACATTGAGATGAATTAAAAATCGAATAGTGTATTAAAATGATATT ATTCATATAGTTTCAAGTGCCAAATTGTCGACAGATTAAAAAAGAACTCA TACTTACCACCCTATAATATTTATCCAGAGGACTCTGCCCAGATTTTAAA ACTAAAAACGTAGAGCAATTTTGTATTCAAGTAGCAATGCATCGAATAAA AAGCAATATTGAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11158986..11160461 | 1476..1 | 7320 | 99.7 | Minus |
chr3L | 24539361 | chr3L | 11157467..11158459 | 2561..1571 | 4870 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 11158666..11158765 | 1574..1475 | 500 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11168137..11169612 | 1476..1 | 7380 | 100 | Minus |
3L | 28110227 | 3L | 11166616..11167610 | 2565..1571 | 4975 | 100 | Minus |
3L | 28110227 | 3L | 11167817..11167916 | 1574..1475 | 500 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11161237..11162712 | 1476..1 | 7380 | 100 | Minus |
3L | 28103327 | 3L | 11159716..11160710 | 2565..1571 | 4975 | 100 | Minus |
3L | 28103327 | 3L | 11160917..11161016 | 1574..1475 | 500 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11157467..11158457 | 1573..2561 | 99 | <- | Minus |
chr3L | 11158668..11158763 | 1477..1572 | 100 | <- | Minus |
chr3L | 11158986..11160461 | 1..1476 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 1..1785 | 168..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 1..1785 | 168..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 1..1785 | 168..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 1..1785 | 168..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 1..1785 | 168..1952 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 30..2590 | 1..2561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 30..2590 | 1..2561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 14..2574 | 1..2561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 30..2590 | 1..2561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
wls-RA | 14..2574 | 1..2561 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11166620..11167608 | 1573..2561 | 100 | <- | Minus |
3L | 11167819..11167914 | 1477..1572 | 100 | <- | Minus |
3L | 11168137..11169612 | 1..1476 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11166620..11167608 | 1573..2561 | 100 | <- | Minus |
3L | 11167819..11167914 | 1477..1572 | 100 | <- | Minus |
3L | 11168137..11169612 | 1..1476 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11166620..11167608 | 1573..2561 | 100 | <- | Minus |
3L | 11167819..11167914 | 1477..1572 | 100 | <- | Minus |
3L | 11168137..11169612 | 1..1476 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11159720..11160708 | 1573..2561 | 100 | <- | Minus |
arm_3L | 11160919..11161014 | 1477..1572 | 100 | <- | Minus |
arm_3L | 11161237..11162712 | 1..1476 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11159720..11160708 | 1573..2561 | 100 | <- | Minus |
3L | 11160919..11161014 | 1477..1572 | 100 | <- | Minus |
3L | 11161237..11162712 | 1..1476 | 100 | Minus |
Translation from 167 to 1951
> GH01813.pep MSGTILENLSGRKLSILVATLLLCQVLCFLLGGLYAPLPAGHVTVLGSLC REDHARQNDTSFLLYSRGAGACIPVTREEVEQDSTKMANELVHVFQMPLP RDLRDLDYSRWQQNLIGVLQVEFGYDSSSELREPPRELQLTIDMRLAYRN KGDPDNGWKLYAHGVEHRYLDCVTSHVGPTETLYSCDMIPLFELGALHHS FYLLNLRFPLDTPSQMNLQFGHMHDLTLTAIHQNGGFTQIWLLLKTMLFP FVVGIMIWFWRRVHLLQRSPALLEYMLIYLGAALTFLNLPLEYLSLVYEM PYMLLLSDIRQGIFYAMLLTFWLVFAGEHMLIQDAPNKSTIRSRYWKHLS AVVVGCISLFVFDICERGVQLRNPFYSIWTTPLGAKVAMTFIVLAGVSAA IYFLFLCYMIWKVFRNIGDKRTSLPSMSQARRLHYEVPLDQKVEDWAGIV YFYTKAFFFQLHKANESKGLIYRFKFLMLATLVCAALTVAGFIMGQMAEG QWDWNDNVAIQPTSAFLTGVYGMWNIYIFALLILYAPSHKQWPTMHHSDE TTQSNENIVASAASEEIEFSHLPSDSNPSEISSLTSFTRKVAFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24563-PA | 562 | GF24563-PA | 1..562 | 1..594 | 2864 | 90.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13932-PA | 591 | GG13932-PA | 1..591 | 1..594 | 3017 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16661-PA | 681 | GH16661-PA | 1..437 | 1..437 | 1959 | 82.6 | Plus |
Dgri\GH16661-PA | 681 | GH16661-PA | 556..681 | 469..594 | 618 | 91.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
wls-PA | 594 | CG6210-PA | 1..594 | 1..594 | 3139 | 100 | Plus |
wls-PB | 562 | CG6210-PB | 1..562 | 1..594 | 2923 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11620-PA | 562 | GI11620-PA | 1..562 | 1..594 | 2509 | 79.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22839-PA | 562 | GL22839-PA | 1..562 | 1..594 | 2736 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19442-PA | 562 | GA19442-PA | 1..562 | 1..594 | 2739 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24767-PA | 607 | GM24767-PA | 1..607 | 1..594 | 3102 | 96 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12816-PA | 607 | GD12816-PA | 1..607 | 1..594 | 3111 | 96.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11298-PA | 562 | GJ11298-PA | 1..562 | 1..594 | 2581 | 80.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK20551-PA | 562 | GK20551-PA | 1..562 | 1..594 | 2608 | 82.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE20230-PA | 562 | GE20230-PA | 1..562 | 1..594 | 2955 | 93.8 | Plus |
Translation from 167 to 1951
> GH01813.hyp MSGTILENLSGRKLSILVATLLLCQVLCFLLGGLYAPLPAGHVTVLGSLC REDHARQNDTSFLLYSRGAGACIPVTREEVEQDSTKMANELVHVFQMPLP RDLRDLDYSRWQQNLIGVLQVEFGYDSSSELREPPRELQLTIDMRLAYRN KGDPDNGWKLYAHGVEHRYLDCVTSHVGPTETLYSCDMIPLFELGALHHS FYLLNLRFPLDTPSQMNLQFGHMHDLTLTAIHQNGGFTQIWLLLKTMLFP FVVGIMIWFWRRVHLLQRSPALLEYMLIYLGAALTFLNLPLEYLSLVYEM PYMLLLSDIRQGIFYAMLLTFWLVFAGEHMLIQDAPNKSTIRSRYWKHLS AVVVGCISLFVFDICERGVQLRNPFYSIWTTPLGAKVAMTFIVLAGVSAA IYFLFLCYMIWKVFRNIGDKRTSLPSMSQARRLHYEVPLDQKVEDWAGIV YFYTKAFFFQLHKANESKGLIYRFKFLMLATLVCAALTVAGFIMGQMAEG QWDWNDNVAIQPTSAFLTGVYGMWNIYIFALLILYAPSHKQWPTMHHSDE TTQSNENIVASAASEEIEFSHLPSDSNPSEISSLTSFTRKVAFD*