BDGP Sequence Production Resources |
Search the DGRC for GH01842
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 18 |
Well: | 42 |
Vector: | pOT2 |
Associated Gene/Transcript | E(spl)mbeta-HLH-RA |
Protein status: | GH01842.pep: gold |
Preliminary Size: | 1169 |
Sequenced Size: | 975 |
Gene | Date | Evidence |
---|---|---|
CG14548 | 2001-01-01 | Release 2 assignment |
CG14548 | 2002-05-17 | Blastp of sequenced clone |
CG14548 | 2003-01-01 | Sim4 clustering to Release 3 |
HLHmbeta | 2008-04-29 | Release 5.5 accounting |
HLHmbeta | 2008-08-15 | Release 5.9 accounting |
HLHmbeta | 2008-12-18 | 5.12 accounting |
975 bp (975 high quality bases) assembled on 2002-05-17
GenBank Submission: AY118723
> GH01842.complete TGCACACAGAGTCTCCGAGTCCGAATCTAGTGGAACGTTGCGACTGTGGA TTACGCGAGTTTACTTTACCCCCAATAAAAAAAAAAAACAAAACCAAACT ACAACAAAATGGTTCTGGAAATGGAGATGTCCAAGACCTATCAGTACCGC AAGGTGATGAAGCCCATGCTGGAGCGTAAGCGCCGTGCCAGGATTAACAA GTGCCTGGACGAGCTCAAGGACATCATGGTGGAGTGCCTGACCCAGGAGG GCGAGCACATCACCCGGCTGGAGAAGGCCGACATCCTGGAGCTGACCGTG GAGCACATGAAGAAGCTGCGTGCCCAGAAGCAGCTGCGTCTGTCCAGCGT CACCGGTGGAGTGTCTCCGAGTGCCGATCCCAAGCTTAGCATCGCTGAGA GTTTCCGTGCTGGCTACGTTCATGCTGCCAATGAAGTGTCCAAAACCTTG GCCGCTGTACCCGGAGTGAGTGTGGATCTCGGCACCCAGCTGATGAGTCA CCTTGGCCATCGTCTCAACTACCTGCAAGTGGTGGTTCCCTCGCTGCCCA TTGGAGTGCCTCTTCAAGCTCCAGTAGAGGATCAAGCTATGGTCACTCCA CCTCCCTCGGAATGCGACAGCTTGGAGAGCGGAGCCTGCAGCCCGGCGCC CAGCGAGGCCAGCTCCACCTCTGGCCCCATGTGGCGTCCCTGGTGATCAA CTGGACTCCGGATGATATTCACCTGAATCGCCTTCAAGCGGAAGGCTTCT ACAAATTTGTTGCCCCAAAGAGGTGCTGGACTTGAAACCGCACCGAACTC CTTGGAGATCATCAATTGCTGCCCAGGAATAGCTTTCCCAGCAGCCCAGC AGAGCCACCGATCATCTCTAGCAGAGCCTCAAATTTCGGCTATAGAGATG GCTGCTGCTCACTTCTTAAAGTCATAAAGAAATGAAAATAAATGAAATTC CAACTCAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HLHmbeta-RA | 1098 | HLHmbeta-RA | 25..980 | 1..958 | 4735 | 99.7 | Plus |
HLHm3-RA | 1422 | HLHm3-RA | 312..505 | 121..314 | 640 | 88.6 | Plus |
HLHmgamma-RA | 904 | HLHmgamma-RA | 107..204 | 124..221 | 400 | 93.8 | Plus |
HLHmgamma-RA | 904 | HLHmgamma-RA | 230..282 | 247..299 | 160 | 86.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 21828032..21828985 | 956..1 | 4700 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 21845013..21845206 | 121..314 | 625 | 88.1 | Plus |
chr3R | 27901430 | chr3R | 21822953..21823128 | 124..299 | 460 | 84.1 | Plus |
chr3R | 27901430 | chr3R | 21860162..21860275 | 124..237 | 405 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 26005044..26005999 | 958..1 | 4725 | 99.8 | Minus |
3R | 32079331 | 3R | 26022026..26022219 | 121..314 | 640 | 88.7 | Plus |
3R | 32079331 | 3R | 25999964..26000139 | 124..299 | 460 | 84.1 | Plus |
3R | 32079331 | 3R | 26037178..26037291 | 124..237 | 405 | 90.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 25745875..25746830 | 958..1 | 4735 | 99.7 | Minus |
3R | 31820162 | 3R | 25762857..25763050 | 121..314 | 640 | 88.6 | Plus |
3R | 31820162 | 3R | 25778009..25778122 | 124..237 | 405 | 90.3 | Plus |
3R | 31820162 | 3R | 25740795..25740892 | 124..221 | 400 | 93.8 | Plus |
3R | 31820162 | 3R | 25740918..25740970 | 247..299 | 160 | 86.7 | Plus |
3R | 31820162 | 3R | 25738587..25738693 | 127..233 | 160 | 76.6 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 21828032..21828985 | 1..956 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmbeta-RA | 1..588 | 109..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmbeta-RA | 1..588 | 109..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
E(spl)mbeta-HLH-RA | 1..588 | 109..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmbeta-RA | 1..588 | 109..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
E(spl)mbeta-HLH-RA | 1..588 | 109..696 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmbeta-RA | 25..978 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmbeta-RA | 25..978 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
E(spl)mbeta-HLH-RA | 25..978 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
HLHmbeta-RA | 25..978 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
E(spl)mbeta-HLH-RA | 25..978 | 1..956 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26005046..26005999 | 1..956 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26005046..26005999 | 1..956 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 26005046..26005999 | 1..956 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 21830768..21831721 | 1..956 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 25745877..25746830 | 1..956 | 99 | Minus |
Translation from 1 to 695
> GH01842.hyp AHRVSESESSGTLRLWITRVYFTPNKKKTKPNYNKMVLEMEMSKTYQYRK VMKPMLERKRRARINKCLDELKDIMVECLTQEGEHITRLEKADILELTVE HMKKLRAQKQLRLSSVTGGVSPSADPKLSIAESFRAGYVHAANEVSKTLA AVPGVSVDLGTQLMSHLGHRLNYLQVVVPSLPIGVPLQAPVEDQAMVTPP PSECDSLESGACSPAPSEASSTSGPMWRPW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
E(spl)mbeta-HLH-PA | 195 | CG14548-PA | 1..195 | 36..230 | 999 | 100 | Plus |
E(spl)mgamma-HLH-PA | 205 | CG8333-PA | 8..205 | 41..230 | 475 | 50.5 | Plus |
E(spl)m3-HLH-PA | 224 | CG8346-PA | 3..224 | 40..230 | 422 | 45.5 | Plus |
E(spl)m7-HLH-PA | 186 | CG8361-PA | 1..186 | 36..230 | 412 | 46.3 | Plus |
E(spl)mdelta-HLH-PA | 173 | CG8328-PA | 9..173 | 42..230 | 308 | 40 | Plus |
Translation from 108 to 695
> GH01842.pep MVLEMEMSKTYQYRKVMKPMLERKRRARINKCLDELKDIMVECLTQEGEH ITRLEKADILELTVEHMKKLRAQKQLRLSSVTGGVSPSADPKLSIAESFR AGYVHAANEVSKTLAAVPGVSVDLGTQLMSHLGHRLNYLQVVVPSLPIGV PLQAPVEDQAMVTPPPSECDSLESGACSPAPSEASSTSGPMWRPW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18225-PA | 200 | GF18225-PA | 1..196 | 1..195 | 919 | 91 | Plus |
Dana\GF16796-PA | 205 | GF16796-PA | 11..205 | 9..195 | 473 | 49.3 | Plus |
Dana\GF16799-PA | 224 | GF16799-PA | 3..135 | 5..136 | 416 | 61.9 | Plus |
Dana\GF16801-PA | 180 | GF16801-PA | 1..180 | 1..195 | 406 | 48.2 | Plus |
Dana\GF16795-PA | 182 | GF16795-PA | 9..182 | 7..195 | 335 | 40.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12207-PA | 195 | GG12207-PA | 1..195 | 1..195 | 1016 | 99 | Plus |
Dere\GG11450-PA | 205 | GG11450-PA | 8..205 | 6..195 | 483 | 49.5 | Plus |
Dere\GG11454-PA | 226 | GG11454-PA | 3..226 | 5..195 | 424 | 45.3 | Plus |
Dere\GG11458-PA | 186 | GG11458-PA | 1..124 | 1..140 | 401 | 57.9 | Plus |
Dere\GG11449-PA | 173 | GG11449-PA | 9..173 | 7..195 | 327 | 39.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18148-PA | 210 | GH18148-PA | 1..210 | 1..195 | 834 | 80.7 | Plus |
Dgri\GH19452-PA | 217 | GH19452-PA | 11..182 | 9..189 | 484 | 54.9 | Plus |
Dgri\GH19456-PA | 228 | GH19456-PA | 3..136 | 5..136 | 399 | 59 | Plus |
Dgri\GH19458-PA | 207 | GH19458-PA | 1..207 | 1..195 | 397 | 40.4 | Plus |
Dgri\GH19451-PA | 198 | GH19451-PA | 9..198 | 7..195 | 335 | 39 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
E(spl)mbeta-HLH-PA | 195 | CG14548-PA | 1..195 | 1..195 | 999 | 100 | Plus |
E(spl)mgamma-HLH-PA | 205 | CG8333-PA | 8..205 | 6..195 | 475 | 50.5 | Plus |
E(spl)m3-HLH-PA | 224 | CG8346-PA | 3..224 | 5..195 | 422 | 45.5 | Plus |
E(spl)m7-HLH-PA | 186 | CG8361-PA | 1..186 | 1..195 | 412 | 46.3 | Plus |
E(spl)mdelta-HLH-PA | 173 | CG8328-PA | 9..173 | 7..195 | 308 | 40 | Plus |
E(spl)m8-HLH-PA | 179 | CG8365-PA | 5..179 | 8..195 | 291 | 38.1 | Plus |
E(spl)m5-HLH-PA | 178 | CG6096-PA | 12..178 | 7..195 | 256 | 34.2 | Plus |
dpn-PA | 435 | CG8704-PA | 39..159 | 12..142 | 225 | 35.9 | Plus |
h-PB | 337 | CG6494-PB | 32..182 | 14..179 | 219 | 32.5 | Plus |
h-PA | 337 | CG6494-PA | 32..182 | 14..179 | 219 | 32.5 | Plus |
Hesr-PA | 149 | CG5927-PA | 16..116 | 8..114 | 188 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22910-PA | 210 | GI22910-PA | 1..210 | 1..195 | 826 | 81.5 | Plus |
Dmoj\GI24686-PA | 217 | GI24686-PA | 8..182 | 6..189 | 488 | 55.7 | Plus |
Dmoj\GI24690-PA | 229 | GI24690-PA | 3..138 | 5..136 | 409 | 59.9 | Plus |
Dmoj\GI24692-PA | 207 | GI24692-PA | 1..207 | 1..195 | 389 | 40.9 | Plus |
Dmoj\GI24685-PA | 185 | GI24685-PA | 9..185 | 7..195 | 338 | 41.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22021-PA | 200 | GL22021-PA | 1..200 | 1..195 | 888 | 89.5 | Plus |
Dper\GL21815-PA | 214 | GL21815-PA | 8..178 | 6..186 | 504 | 58.2 | Plus |
Dper\GL21819-PA | 225 | GL21819-PA | 3..133 | 5..136 | 414 | 60.6 | Plus |
Dper\GL21822-PA | 207 | GL21822-PA | 1..207 | 1..195 | 378 | 41.1 | Plus |
Dper\GL21813-PA | 188 | GL21813-PA | 9..188 | 7..195 | 331 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13073-PA | 200 | GA13073-PA | 1..200 | 1..195 | 888 | 89.5 | Plus |
Dpse\GA20996-PA | 214 | GA20996-PA | 8..178 | 6..186 | 502 | 57.7 | Plus |
Dpse\GA21008-PA | 219 | GA21008-PA | 3..219 | 5..195 | 415 | 45.9 | Plus |
Dpse\GA21018-PA | 206 | GA21018-PA | 1..206 | 1..195 | 371 | 40.2 | Plus |
Dpse\GA20991-PA | 188 | GA20991-PA | 9..188 | 7..195 | 331 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10206-PA | 195 | GM10206-PA | 1..195 | 1..195 | 1010 | 97.9 | Plus |
Dsec\GM10294-PA | 205 | GM10294-PA | 8..205 | 6..195 | 486 | 49.5 | Plus |
Dsec\GM10297-PA | 221 | GM10297-PA | 3..221 | 5..195 | 429 | 46.4 | Plus |
Dsec\GM10299-PA | 186 | GM10299-PA | 1..186 | 1..195 | 400 | 46.5 | Plus |
Dsec\GM10293-PA | 173 | GM10293-PA | 9..173 | 7..195 | 326 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\HLHmbeta-PA | 195 | GD18157-PA | 1..195 | 1..195 | 1016 | 99 | Plus |
Dsim\HLHmgamma-PA | 205 | GD21258-PA | 8..205 | 6..195 | 486 | 49.5 | Plus |
Dsim\HLHm3-PA | 224 | GD21261-PA | 3..224 | 5..195 | 426 | 45.7 | Plus |
Dsim\HLHm7-PA | 186 | GD21263-PA | 1..186 | 1..195 | 403 | 45.8 | Plus |
Dsim\HLHmdelta-PA | 173 | GD21257-PA | 9..173 | 7..195 | 326 | 40.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23323-PA | 209 | GJ23323-PA | 1..209 | 1..195 | 837 | 81.5 | Plus |
Dvir\GJ23903-PA | 217 | GJ23903-PA | 8..182 | 6..189 | 487 | 56.2 | Plus |
Dvir\GJ23906-PA | 220 | GJ23906-PA | 3..136 | 5..136 | 415 | 62.2 | Plus |
Dvir\GJ23909-PA | 197 | GJ23909-PA | 1..197 | 1..195 | 398 | 44.3 | Plus |
Dvir\GJ23902-PA | 188 | GJ23902-PA | 9..188 | 7..195 | 354 | 40.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12809-PA | 201 | GK12809-PA | 1..201 | 1..195 | 751 | 77.6 | Plus |
Dwil\GK14455-PA | 209 | GK14455-PA | 8..209 | 6..195 | 502 | 52.4 | Plus |
Dwil\GK14459-PA | 200 | GK14459-PA | 1..146 | 1..159 | 421 | 55 | Plus |
Dwil\GK14458-PA | 223 | GK14458-PA | 3..133 | 5..136 | 410 | 59.1 | Plus |
Dwil\GK14454-PA | 184 | GK14454-PA | 9..184 | 7..195 | 350 | 42.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\HLHmbeta-PA | 195 | GE10652-PA | 1..195 | 1..195 | 1007 | 97.9 | Plus |
Dyak\HLHmgamma-PA | 205 | GE23644-PA | 8..205 | 6..195 | 482 | 49 | Plus |
Dyak\GE23647-PA | 224 | GE23647-PA | 3..224 | 5..195 | 426 | 45.7 | Plus |
Dyak\HLHm7-PA | 186 | GE23649-PA | 1..124 | 1..140 | 401 | 57.9 | Plus |
Dyak\HLHmdelta-PA | 173 | GE23643-PA | 9..173 | 7..195 | 324 | 40.1 | Plus |