Clone GH01875 Report

Search the DGRC for GH01875

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:18
Well:75
Vector:pOT2
Associated Gene/TranscriptCG42748-RB
Protein status:GH01875.pep: gold
Preliminary Size:1464
Sequenced Size:6880

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG15217 2001-01-01 Release 2 assignment
CG6448 2001-01-01 Release 2 assignment
CG6448 2003-01-01 Sim4 clustering to Release 3
CG6448 2003-02-24 Blastp of sequenced clone
CG6448 2008-04-29 Release 5.5 accounting
CG6448 2008-08-15 Release 5.9 accounting
CG6448 2008-12-18 5.12 accounting

Clone Sequence Records

GH01875.complete Sequence

6880 bp (6880 high quality bases) assembled on 2003-02-24

GenBank Submission: BT004885

> GH01875.complete
TTGTCTTTGCGAGTTAGCCATTTGCAATCGTGCGGTCTTTTCAATGTGTC
TGTAGCCGCCCCAATTACATATGTATTTCGTCTGTGGATATATGTACGAT
GTACATATGTATATAGGATGTACACATTTGTACATATAAATATATGAACA
ATGCCTATTTCTCCAGCTTTCGTTTACAGTAGTTTTGAGAAAGAAGTGTA
TCTGAGTGTTTACGTGAATATTGAGGGCACAAAACAAAATAGCAGAGCAA
AGAAAAAATAGCTCGTTGTAAATTAGACATGGAGAACATACAATGCCTTT
CAAAAAGTTATAAAAGTGACCAGAAGACCGCGGAGATTTCGTTGTCGCGC
TTGTCATATTGCCCAACCGGTCAGGACTCTTTCTACTGAACATTCTATTG
TTATTTTATATAAGTATCTATGTACAGATGTATGTATGTTGAAGCCGAAT
AAAAAATTAAGCATGGATTTGTATATAAATAAAAATGTTTACTGCATTCC
CGACATATCAACAACACAATACATGTAAATGTATGTGTATGTACATGCAT
ATGATCACATTTGCTACTAGAAAGCTCTTAGAGACCTCACCGCTTTCTAT
TTGAAAATACATTTACACAGTTACACAAAAAAGATATGTTTAATACGGCC
ATATAAAATACTGCCATCCACTGCGAAGTACATAGTACAATTTTGACTAA
AACGATTCCTTTCTATGGCAGCTACGTATAACATAAAGTCAGCGATCCGC
AAACAAGATGAGATGAAAACGCAATGATTAAATCAAATTTGCATTTGCCA
ATTAAATACGACAGCGGAAGTGCCGATAGTGCCAATTAGCATTATTGCCA
CGACGCCGATCTATGGTCACAATTTGTTCCTTGTCAGCTGCACTAAGTTG
TAACATTGCTTATAGATTTCCTATCTATGAAATGGAGCATTTAGATCTTG
CCGGCTATCTTGGCCACACGCCTCAAAGTTGGAATACCCTGGGAACCTTT
CAGGATCAAGATGCTGTTTACCTATCTAGCTCGCGACAAATGTTGGAACC
AATTTTGGAGGAGACTAGCGAGGATGAGGAACGTGCCCGAAGTAGCTTGA
TTGTAAGCCTAGATCGCCGCTCCACCCTCTGGAGCTCTACGGAGTCTGAA
ACTGGATCAGTCTTACGCATAGAAACGATTAAGGATATCGATGCTGTTTC
TGAGAGGGACTTTGTCTGCCCACCCAAGCGACCAAGGCGCAGCCATGACT
TAAATTCTGGCCAGATTTCAGAGGATTGCGTGCAACTTCGCCGCCCTATG
CCTTACGATCCCGAGTACCACAATAGCTTTGAACGCTTTCTGGCTTTGGA
GGCATGTGCTCGCGATAGCTTCGGAAGCCAGGGCCAACGCAGCAGTATAG
GCAGTAGGCGAGGGGGCACCTTCGAGGACTTTTATTCGGACAGGGACTCC
TCCCACTCGCTATCGCGCAGCTCCTCCTTGGTACAGTTCGAGTCCTTGGA
ACGCCAGCTCACGCTCCAGGAGCAGCATCAGAGTATGAACAGTCTGGGCA
ACAGTTCGCCCTCGCTCACCTGCGAGTCTGGTGCTTCAACGCGGGCCAGG
ACCAGGGACAGCAGTCCAGAGAGTAGGAAGGGATCAGCCCCGACGCTGTC
CCTGCTAAAGCGTTATGAATCCAGCGACTGTAGTCATCTGCACCAGACAT
ACTATGAGCTGAACAATCTCAATTTTGAATATAAGCAGCAGCAGGAACTT
CTCTCCAGAAGCCTGCGAGAGGCGGAGCTAAAATCTGACCTAGAGAGCTC
CTCTAGCTCCAGCTCGTCCAGCGATAGCAGTGGTCACAGCCTTCTAAGCT
CTTGCCTTGTTCCCGGAGATGCAGTAGCAACCGAAAGGGGGAAACAGGAC
GGGACGAATTCTCGTCGAATTCCCCCCAACTCAGCTGAGAACCTGTCCGA
GGACTCCGGCTACTGCGAGCCAAGAACCCTAAAGCGGGAAAAGTCCAAAT
CCATACCAAAGAATTTCGAGAAACTTTGCGAAGAGGAGGAGGAGCTGCTG
TTACTGGAGGAGGGCGCTCCGCATTCTCGCGACTTCAAAGACGAGCATGA
TTTGTGTCAGACCGAAATAGAGCAGACTGCGGATACGGCTGCATTAGCAT
GCTCTCCGTCGTCTATAAATAGTTCCCCGGAGAGGGCCAGCTCCGAATCG
GAATCGGCATCGCCGCTGCCATCGCCGACCGGATCGGCATCAACGTCGTC
TGCCGCCTCGTTCACTTGGCTACACAACAGTTTGCCAGATATCCGCGAGC
CACGAGGTCCACTCTCTGTGGAAATTAACAATTCAAAGCCCAAGACAAAC
GGCAGCGTTCTGGCCACCACCAGACAAAATAGTGGCAGCACCCGGAGCAG
CAGCTCCGCCGATAGCTGTGACGGTATATCGCTCCTCGGCCCCACCCATT
CACTCAACGAGCTCCAGGTGCTTGAACGGAGGCGACGACCACGTCATATT
CGCCCCAGCCAGAGAAACTGTCACAGCAACAGTTCCAGTGAGGAACTGGA
GGAGCTGGACAACTTATTTGTTGCCTGCCACACCCCGCCAAGGATCCGAC
GCAGTTGCAGCTGGAACGAACGAGCTAGAAAAGTAGTGGGTGTGGCAAGT
GCCGGATATTTGAACGCTAGTTACCAAAACCTAACTCTATTGAACTACAC
GGATAACTGGCTGCCGGCAGAGATTCTTCAGAAGAACCACAAGAGGAGCC
CAGCAGAAGAAATGTCGAAACAAAGCAGTAATACCTGCGGAAATTACGAG
CACATGATATGTAAGGGAAACTTTTTGCTGGATGAGATCAGCAAGGTTTA
TGACAAAAATGTGTCTATACTGACGGATAAGCCGGTGCTGGATACCAAGC
TCCCTGCGCCAGTGGAATGTGATTTAAATGAACCTATTGAATGTTCGAAG
GTGCAGCACGTGCAGCTAAACATAAAGCCACCGCCGCGCCAGAAACGTTT
GACTCAACAGCCGCCAGCCGCCATGACCTTTAATGGCCTTGTTAAAACAT
TTGACCAGGATCCCACTAACTTGCGAACCTCGTACACCCAAAGCCTAGAG
CAGTGCCACCTTGACGAGCAAGAAACGGCAAAGCCTGCTTCGTACCCGCC
GTCAGCCATCTCACAACGGTTCCTGCCCAAGCGGCGATTCCAGTCCCAGA
CGTCGGCGGCTAAGCAGCGAAGTCTGGTAAGCAGCACGCCAAATCTCGCG
GCCAGCGACGACGGGCAGCCGGAATCCGAGTACGATATCTACGTGAGCAG
TGCACACGCCTCAATGCACCAGTTGCCGCAGACAACAACGCTCCCGAAGC
CGCTGGGGATTCTGCTTCCAGCCGGATCGCGCCATTCTTTTGGCAAGGAG
GTAAGCTTCTGCCCAGTGGTAAGCAAGTACTGTTGGCAGGAGCAGTCCTC
CGAGGAGCCCACCGAGGACCAGTTCCACTCCAGCGAGGGCGAGCAGGGGC
CGCCCAGCGATGACGAACTGATGGACCCCACATTGGTGCACAACACCAGA
GAGAACGAAAACATCGCTGCGCTCTTCGAGCCCGAGCCAGAGCAGGCGCA
TCGTCTAAGAGAGCCGGCGATCGCACAAAAGTTTACCGGTTTCCATACCA
ATGCGCTCTTGTCCGCCTCCACACACGCAGAGAAAAACTTATCATGTGAA
GAGAGCGCCAATGTCAAAAACAAAGCAAACTTAGCCACACCCGATTGCCG
CGATCAAAGAACCGAAGCTAAGACCACCCTGGAACCTGAGCCCGCTTTAA
GCAGCACAGTCAGTCTAAAACCTTGTGCCGTTGCGAACTCGTCTTGTCGA
GAAGAAACTCCGAGCGATGCTATTAATGAACCTGCATCTGCGACTGCACG
ACCACTTAGCTTGCCGATTCTTAGCGAGCCGCCTACCAACCGCGCGCACC
GCATCCTATACTCATCCCAACAACTAAGGCGATACGAACCGAAGGCGTCA
CCGATTAACAAGATGCCGCCGGCCAACGAACTTAGCCCGCAAGCCGCGGC
TGTTGCGAGAACGGACGAGAAACATCCAACCTCCAGAAGCCTCTTCTCCA
GGTTCACCCACGGGCTGAGATTTTCGTTGCGTCGCAAAAAGAAGCAGCAG
CAACAAGAGCCTTCGCAGGTCAAAGAGTCGCCAAAGGAGTTAAGGCAGAG
CCCCGAGGAGAGCCAACCGGTCGACTTTGTGCACATCCCTTTAAAGCCGC
CAAGAAGTTCGCAATGTGGCCGACTGGACGATACTATCGTGTCAGAGACA
AGCAGTGGCCACGTGCACAGCTGGCAGCAACAGGAACAGCTGGGCAAGAC
CTCAACTCTGCAAAAGGTGACTGGCAAGCCGCCACTGCCCAAGATGCCAC
CACGCAGTGGCATCCTAACGCATGCGCCTCAGGAAACGACCGGTGAAACT
GTCAATTGCCATCGCACCGAGGCGTTGCCGAGCGTCGAACGAGAACACTG
CAATCAGTTAACCGGACAGTTGGTGGCTAAGGTTCAAGCACAGAGAATGC
GGGACACCGGGCTCAGCTCGCAGATAGTAGTCGCCGAAGAGACACATACG
GTTAATCGACTGGCCGGACACGGCGACGCGACTAGGCCCACTGTGGTTAC
CGCCGTTCCGGTTTCCGTTGCTCCTGTCGCAGAGGTCGACAAGATGGGTT
TGATCGAGACCAATCTGGACACTCATGAAACGGTTATATCGGGAAAGACA
CGGTCTCTTATGGATATAACTTGCAACCCACTTAGCATGCCACACAAGCG
ATACATCGTAAAGCGTCTAAATGTAAACAGCGTTGCGTATGACGTAGATG
AATTGGACGCAGAAGTTAAACCCTCGCCTGGTGGAATGGCATCCGTACGC
AGGCCTCACAAGAGTATGGAATTTCTGCTGGACAAGGAGAACCAGAAAAA
TATTCTGCCCCCTGAAAACGAACTGCAGAAATCACATGACCACAATCCAG
GCGCACTAAGCGAGCATCAACTGCGTGTCCAAGCTTCGCTTCAGCGGCTA
AATATTCCCGACTGGTTCCGTCATTACAACAAAGGCCCCGAAAAGGCAGC
AGATGGCGAAAACGCATGCACAAGTGCGACTGGCGGTGGTTACCGACCTG
GCAACTTCACCCGCAAACGCGCACAGGAATCGGGTCGCTGGCAAGGGCTC
AACTCAAAGACGACTTCCCTCAGCTCGCTGGGATCTCAACGCTCCGACCG
AAGTCCTTTGTTGATGAGTCCCTCAGCGCACAGTCATCACGGCGGCCAAA
GCTCCTATTCATGTGGGTCGACGACAATTCACGGTCCGGCACCTGTACAG
ATAGGCATGGGTGCAACTCGCTGGTCAACCTCTCATCTGAATTCCACTCA
GATGTCTCCCGGTGCCTCGCAGCGCGGAAGCTTTACGCGCGGCGCCCCCA
TTAATAGCAGCTTTATATCTGTGGCCAGTGGTAGTGGCTTGTTGCGCAAT
TCCTACCGACAGCCGTATTTGGGTTGGCGCAGCACAGAGAAGCTCTCCCA
ACGAACTCCCCACGAACGTCTGGCCAATTCGCTGCTAACCCAACGGACAG
CTCCGCCCTCCACACGGGCGGGCAATGAAACCCGCACCTTACATTCTGTA
TCGACAGAGATTCAAAGCTCCATTAAGGAAGTCACATCCGCCATCGTTCA
CTTCGTGAACGACCAGCAGCAGTCCCAACATCCGCGGAGCCGTTCTACCA
GTCCAAATTCAAGGTGCTGGCTGGAAAGCAGCTTTGTTGGTACACGAACC
CTGGACTCGCCGCAAACACCCGTCATTGACAACAGTCCTCCCGAATTGGC
ACGAAAGCAGCAGCAGCTCCACCCGCACCAAGTGCATCTGGATGTCGGTC
TGTCGCCTGTAGTCTCCGCTGGTCAGCTGCCACATCGCATGAACGGAATA
AATCGTATCGGCAACGGTGGCGGTGAGTCCGCCATCCAAGTTTGATAGTT
TGCCAGAGTAGAAATACTGGTAACCGGCAGTTTATGCTTTTTGTTTGGTG
CACGGCATTTTTGTAGCCTATCTGCAAACAGTAAATTAATTGTGTGAACA
CGTAGGCATCCACACCTTTATTCCGTATAAAAATCATCAGCCTATATGAA
CGCAAAAAAAATATTTTTATTTATCTTCTATAGTGGATCTTAATTGTTTT
ACATTTAATTATTAATTTATTAAATTCAAAGGAGCAGAAACTTTTGCTCT
TCTAATTATTTATCGAATACTCATGATTTGCCTTTGCCTCGGGTATAGAA
AATTGTAGATTTGGGCAGAAAACCATATCCGTTACTTCTGCAGTAAAATG
TCAAATAGATCCGCGGAAAAAAATGTAATAGGTAGAAATATGTCTGTCAC
GTCTGTCCGTATTTCCATTTGTATAAACTTAGCGATAAGATTAGGCATGC
AAATCGCTTTCATAATATTGGCATGAATAATTTTTGATATTTAAATTGGC
ATTTGTTTTTCTTGCTTAATTCTTAATATTTGTCACGAAAAACACTTTCC
CACCATCATTTAACGCCCACAAACTTTACAACTATGGGCCGATAAATTGT
TCGAATGGCACTATTACTTTAAAAGTTTTAATGACGTATCATGACATAAT
TGCGTCAAATACTTATGAGCAGATAGCTGAGTAACGGGTATACAATAGTC
GAGGAACTCGACTATAGCCTAACTCTTTTACATTTCAATTAAACAACGAA
ATATGTACTAAGCCTTTCTTCTAATTTAATGATCAAACGAGACTAGAAAC
CCATCTTTACTTTAAATATGTGCCCAATTGATTAATAAACCCAAAATGAG
ACCACTAAGAATAAAAAAAAAAAAAAAAAA

GH01875.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:52:22
Subject Length Description Subject Range Query Range Score Percent Strand
CG6448.b 7340 CG6448.b 45..6910 1..6866 34300 99.9 Plus
CG6448-RA 7030 CG6448-RA 45..6910 1..6866 34300 99.9 Plus
CG6448-RC 7285 CG6448-RC 40..5804 1..5765 28795 99.9 Plus
CG6448-RC 7285 CG6448-RC 6040..7145 5761..6866 5530 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 05:48:48
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 22140372..22142819 1184..3631 12240 100 Plus
chr2L 23010047 chr2L 22144206..22145533 3630..4957 6595 99.8 Plus
chr2L 23010047 chr2L 22157046..22158146 5762..6862 5505 100 Plus
chr2L 23010047 chr2L 22132896..22133652 1..757 3785 100 Plus
chr2L 23010047 chr2L 22153334..22153945 4957..5568 3060 100 Plus
chr2L 23010047 chr2L 22139255..22139509 756..1010 1245 99.2 Plus
chr2L 23010047 chr2L 22155157..22155354 5568..5765 990 100 Plus
chr2L 23010047 chr2L 22140132..22140307 1009..1184 880 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:26:55 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 05:48:44
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22141833..22144280 1184..3631 12240 100 Plus
2L 23513712 2L 22145669..22146996 3630..4957 6610 99.8 Plus
2L 23513712 2L 22158511..22159615 5762..6866 5525 100 Plus
2L 23513712 2L 22134351..22135107 1..757 3785 100 Plus
2L 23513712 2L 22154797..22155408 4957..5568 3060 100 Plus
2L 23513712 2L 22140717..22140971 756..1010 1275 100 Plus
2L 23513712 2L 22156620..22156817 5568..5765 990 100 Plus
2L 23513712 2L 22141593..22141768 1009..1184 880 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:11:52
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 22141833..22144280 1184..3631 12240 100 Plus
2L 23513712 2L 22145669..22146996 3630..4957 6610 99.8 Plus
2L 23513712 2L 22158511..22159615 5762..6866 5525 100 Plus
2L 23513712 2L 22134351..22135107 1..757 3785 100 Plus
2L 23513712 2L 22154797..22155408 4957..5568 3060 100 Plus
2L 23513712 2L 22140717..22140971 756..1010 1275 100 Plus
2L 23513712 2L 22156620..22156817 5568..5765 990 100 Plus
2L 23513712 2L 22141593..22141768 1009..1184 880 100 Plus
Blast to na_te.dros performed 2019-03-16 05:48:45
Subject Length Description Subject Range Query Range Score Percent Strand
INE-1 611 INE-1 INE1 611bp Derived from U66884 (e1371475) (Rel. 52, Last updated, Version 6). 443..600 6572..6729 239 64.4 Plus

GH01875.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 05:50:15 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 22132896..22133652 1..757 100 -> Plus
chr2L 22139257..22139509 758..1010 99 -> Plus
chr2L 22140134..22140307 1011..1184 100 -> Plus
chr2L 22140373..22142818 1185..3630 100 -> Plus
chr2L 22144208..22145533 3631..4957 99 -> Plus
chr2L 22153335..22153945 4958..5568 100 -> Plus
chr2L 22155158..22155352 5569..5763 100 -> Plus
chr2L 22157048..22158146 5764..6862 91   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 17:45:50 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG6448-RB 1..5133 863..5995 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:48:48 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG42748-RC 1..5133 863..5995 99   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:03:21 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG42748-RB 1..5133 863..5995 99   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:30:43 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG6448-RB 1..5133 863..5995 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:08:03 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG42748-RB 1..5133 863..5995 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 17:45:50 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG6448-RA 1..6862 1..6862 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:48:48 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG42748-RB 1..6862 1..6862 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:03:21 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG42748-RB 19..6880 1..6862 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:30:43 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG6448-RA 1..6862 1..6862 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:08:03 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
CG42748-RB 19..6880 1..6862 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:50:15 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22134351..22135107 1..757 100 -> Plus
2L 22140719..22140971 758..1010 100 -> Plus
2L 22141595..22141768 1011..1184 100 -> Plus
2L 22141834..22144280 1185..3631 100 -> Plus
2L 22145671..22146996 3632..4957 99 -> Plus
2L 22154798..22155408 4958..5568 100 -> Plus
2L 22156621..22156815 5569..5763 100 -> Plus
2L 22158513..22159611 5764..6862 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:50:15 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22134351..22135107 1..757 100 -> Plus
2L 22140719..22140971 758..1010 100 -> Plus
2L 22141595..22141768 1011..1184 100 -> Plus
2L 22141834..22144280 1185..3631 100 -> Plus
2L 22145671..22146996 3632..4957 99 -> Plus
2L 22154798..22155408 4958..5568 100 -> Plus
2L 22156621..22156815 5569..5763 100 -> Plus
2L 22158513..22159611 5764..6862 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 05:50:15 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22134351..22135107 1..757 100 -> Plus
2L 22140719..22140971 758..1010 100 -> Plus
2L 22141595..22141768 1011..1184 100 -> Plus
2L 22141834..22144280 1185..3631 100 -> Plus
2L 22145671..22146996 3632..4957 99 -> Plus
2L 22154798..22155408 4958..5568 100 -> Plus
2L 22156621..22156815 5569..5763 100 -> Plus
2L 22158513..22159611 5764..6862 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:03:21 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 22141595..22141768 1011..1184 100 -> Plus
arm_2L 22140719..22140971 758..1010 100 -> Plus
arm_2L 22158513..22159611 5764..6862 100   Plus
arm_2L 22134351..22135107 1..757 100 -> Plus
arm_2L 22141834..22144280 1185..3631 100 -> Plus
arm_2L 22145671..22146996 3632..4957 99 -> Plus
arm_2L 22154798..22155408 4958..5568 100 -> Plus
arm_2L 22156621..22156815 5569..5763 100 -> Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 18:09:08 Download gff for GH01875.complete
Subject Subject Range Query Range Percent Splice Strand
2L 22134351..22135107 1..757 100 -> Plus
2L 22140719..22140971 758..1010 100 -> Plus
2L 22141595..22141768 1011..1184 100 -> Plus
2L 22141834..22144280 1185..3631 100 -> Plus
2L 22145671..22146996 3632..4957 99 -> Plus
2L 22154798..22155408 4958..5568 100 -> Plus
2L 22156621..22156815 5569..5763 100 -> Plus
2L 22158513..22159611 5764..6862 100   Plus

GH01875.pep Sequence

Translation from 862 to 5994

> GH01875.pep
MVTICSLSAALSCNIAYRFPIYEMEHLDLAGYLGHTPQSWNTLGTFQDQD
AVYLSSSRQMLEPILEETSEDEERARSSLIVSLDRRSTLWSSTESETGSV
LRIETIKDIDAVSERDFVCPPKRPRRSHDLNSGQISEDCVQLRRPMPYDP
EYHNSFERFLALEACARDSFGSQGQRSSIGSRRGGTFEDFYSDRDSSHSL
SRSSSLVQFESLERQLTLQEQHQSMNSLGNSSPSLTCESGASTRARTRDS
SPESRKGSAPTLSLLKRYESSDCSHLHQTYYELNNLNFEYKQQQELLSRS
LREAELKSDLESSSSSSSSSDSSGHSLLSSCLVPGDAVATERGKQDGTNS
RRIPPNSAENLSEDSGYCEPRTLKREKSKSIPKNFEKLCEEEEELLLLEE
GAPHSRDFKDEHDLCQTEIEQTADTAALACSPSSINSSPERASSESESAS
PLPSPTGSASTSSAASFTWLHNSLPDIREPRGPLSVEINNSKPKTNGSVL
ATTRQNSGSTRSSSSADSCDGISLLGPTHSLNELQVLERRRRPRHIRPSQ
RNCHSNSSSEELEELDNLFVACHTPPRIRRSCSWNERARKVVGVASAGYL
NASYQNLTLLNYTDNWLPAEILQKNHKRSPAEEMSKQSSNTCGNYEHMIC
KGNFLLDEISKVYDKNVSILTDKPVLDTKLPAPVECDLNEPIECSKVQHV
QLNIKPPPRQKRLTQQPPAAMTFNGLVKTFDQDPTNLRTSYTQSLEQCHL
DEQETAKPASYPPSAISQRFLPKRRFQSQTSAAKQRSLVSSTPNLAASDD
GQPESEYDIYVSSAHASMHQLPQTTTLPKPLGILLPAGSRHSFGKEVSFC
PVVSKYCWQEQSSEEPTEDQFHSSEGEQGPPSDDELMDPTLVHNTRENEN
IAALFEPEPEQAHRLREPAIAQKFTGFHTNALLSASTHAEKNLSCEESAN
VKNKANLATPDCRDQRTEAKTTLEPEPALSSTVSLKPCAVANSSCREETP
SDAINEPASATARPLSLPILSEPPTNRAHRILYSSQQLRRYEPKASPINK
MPPANELSPQAAAVARTDEKHPTSRSLFSRFTHGLRFSLRRKKKQQQQEP
SQVKESPKELRQSPEESQPVDFVHIPLKPPRSSQCGRLDDTIVSETSSGH
VHSWQQQEQLGKTSTLQKVTGKPPLPKMPPRSGILTHAPQETTGETVNCH
RTEALPSVEREHCNQLTGQLVAKVQAQRMRDTGLSSQIVVAEETHTVNRL
AGHGDATRPTVVTAVPVSVAPVAEVDKMGLIETNLDTHETVISGKTRSLM
DITCNPLSMPHKRYIVKRLNVNSVAYDVDELDAEVKPSPGGMASVRRPHK
SMEFLLDKENQKNILPPENELQKSHDHNPGALSEHQLRVQASLQRLNIPD
WFRHYNKGPEKAADGENACTSATGGGYRPGNFTRKRAQESGRWQGLNSKT
TSLSSLGSQRSDRSPLLMSPSAHSHHGGQSSYSCGSTTIHGPAPVQIGMG
ATRWSTSHLNSTQMSPGASQRGSFTRGAPINSSFISVASGSGLLRNSYRQ
PYLGWRSTEKLSQRTPHERLANSLLTQRTAPPSTRAGNETRTLHSVSTEI
QSSIKEVTSAIVHFVNDQQQSQHPRSRSTSPNSRCWLESSFVGTRTLDSP
QTPVIDNSPPELARKQQQLHPHQVHLDVGLSPVVSAGQLPHRMNGINRIG
NGGGESAIQV*

GH01875.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 22:48:24
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF13900-PA 1785 GF13900-PA 1..1785 24..1710 4149 56.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 22:48:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21362-PA 1693 GG21362-PA 1..1693 1..1710 7197 84.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 22:48:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10754-PA 1538 GH10754-PA 600..1531 563..1365 1326 43 Plus
Dgri\GH10756-PA 188 GH10756-PA 1..188 1535..1710 502 63.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:20:00
Subject Length Description Subject Range Query Range Score Percent Strand
CG42748-PC 1710 CG6448-PB 1..1710 1..1710 8884 100 Plus
CG42748-PB 1710 CG6448-PA 1..1710 1..1710 8884 100 Plus
CG42748-PJ 1717 CG42748-PJ 1..1717 1..1710 8866 99.6 Plus
CG42748-PG 2139 CG42748-PG 1..1707 1..1707 8853 99.8 Plus
CG42748-PK 2190 CG42748-PK 1..1704 1..1703 8840 99.9 Plus
CG42748-PD 1639 CG6448-PC 1..1634 1..1634 8480 100 Plus
CG42748-PM 1636 CG42748-PM 1..1633 1..1633 8475 100 Plus
CG42748-PE 349 CG6448-PF 5..349 1366..1710 1817 100 Plus
CG42748-PH 778 CG42748-PH 5..346 1366..1707 1786 99.1 Plus
CG42748-PF 413 CG42748-PF 5..342 1366..1703 1785 100 Plus
CG42748-PL 822 CG42748-PL 5..342 1366..1703 1785 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 22:48:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11617-PA 1498 GI11617-PA 1..958 24..922 1833 54.6 Plus
Dmoj\GI11639-PA 814 GI11639-PA 7..359 1366..1703 1139 69.6 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 22:48:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL25532-PA 659 GL25532-PA 1..403 24..421 1115 66.6 Plus
Dper\GL25532-PA 659 GL25532-PA 428..659 1496..1710 703 70.3 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 22:48:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA28025-PA 1496 GA28025-PA 1..403 24..421 1161 69.5 Plus
Dpse\GA28028-PA 195 GA28028-PA 1..195 1535..1710 519 66.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 22:48:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM16159-PA 1234 GM16159-PA 1..1230 24..1330 5254 84.9 Plus
Dsec\GM16161-PA 835 GM16161-PA 13..350 1366..1703 1767 96.7 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 22:48:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24348-PA 921 GD24348-PA 474..909 566..1003 2223 94.5 Plus
Dsim\GD24348-PA 921 GD24348-PA 1..434 1..436 1915 91.5 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 22:48:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ12947-PA 1715 GJ12947-PA 1..948 24..908 1749 53.1 Plus
Dvir\GJ12958-PA 191 GJ12958-PA 1..191 1535..1710 474 63.9 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 22:48:36
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK14765-PA 1798 GK14765-PA 1..1798 24..1710 3804 54.6 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 22:48:37
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12944-PA 1673 GE12944-PA 1..1673 24..1710 6882 83.3 Plus

GH01875.hyp Sequence

Translation from 862 to 5994

> GH01875.hyp
MVTICSLSAALSCNIAYRFPIYEMEHLDLAGYLGHTPQSWNTLGTFQDQD
AVYLSSSRQMLEPILEETSEDEERARSSLIVSLDRRSTLWSSTESETGSV
LRIETIKDIDAVSERDFVCPPKRPRRSHDLNSGQISEDCVQLRRPMPYDP
EYHNSFERFLALEACARDSFGSQGQRSSIGSRRGGTFEDFYSDRDSSHSL
SRSSSLVQFESLERQLTLQEQHQSMNSLGNSSPSLTCESGASTRARTRDS
SPESRKGSAPTLSLLKRYESSDCSHLHQTYYELNNLNFEYKQQQELLSRS
LREAELKSDLESSSSSSSSSDSSGHSLLSSCLVPGDAVATERGKQDGTNS
RRIPPNSAENLSEDSGYCEPRTLKREKSKSIPKNFEKLCEEEEELLLLEE
GAPHSRDFKDEHDLCQTEIEQTADTAALACSPSSINSSPERASSESESAS
PLPSPTGSASTSSAASFTWLHNSLPDIREPRGPLSVEINNSKPKTNGSVL
ATTRQNSGSTRSSSSADSCDGISLLGPTHSLNELQVLERRRRPRHIRPSQ
RNCHSNSSSEELEELDNLFVACHTPPRIRRSCSWNERARKVVGVASAGYL
NASYQNLTLLNYTDNWLPAEILQKNHKRSPAEEMSKQSSNTCGNYEHMIC
KGNFLLDEISKVYDKNVSILTDKPVLDTKLPAPVECDLNEPIECSKVQHV
QLNIKPPPRQKRLTQQPPAAMTFNGLVKTFDQDPTNLRTSYTQSLEQCHL
DEQETAKPASYPPSAISQRFLPKRRFQSQTSAAKQRSLVSSTPNLAASDD
GQPESEYDIYVSSAHASMHQLPQTTTLPKPLGILLPAGSRHSFGKEVSFC
PVVSKYCWQEQSSEEPTEDQFHSSEGEQGPPSDDELMDPTLVHNTRENEN
IAALFEPEPEQAHRLREPAIAQKFTGFHTNALLSASTHAEKNLSCEESAN
VKNKANLATPDCRDQRTEAKTTLEPEPALSSTVSLKPCAVANSSCREETP
SDAINEPASATARPLSLPILSEPPTNRAHRILYSSQQLRRYEPKASPINK
MPPANELSPQAAAVARTDEKHPTSRSLFSRFTHGLRFSLRRKKKQQQQEP
SQVKESPKELRQSPEESQPVDFVHIPLKPPRSSQCGRLDDTIVSETSSGH
VHSWQQQEQLGKTSTLQKVTGKPPLPKMPPRSGILTHAPQETTGETVNCH
RTEALPSVEREHCNQLTGQLVAKVQAQRMRDTGLSSQIVVAEETHTVNRL
AGHGDATRPTVVTAVPVSVAPVAEVDKMGLIETNLDTHETVISGKTRSLM
DITCNPLSMPHKRYIVKRLNVNSVAYDVDELDAEVKPSPGGMASVRRPHK
SMEFLLDKENQKNILPPENELQKSHDHNPGALSEHQLRVQASLQRLNIPD
WFRHYNKGPEKAADGENACTSATGGGYRPGNFTRKRAQESGRWQGLNSKT
TSLSSLGSQRSDRSPLLMSPSAHSHHGGQSSYSCGSTTIHGPAPVQIGMG
ATRWSTSHLNSTQMSPGASQRGSFTRGAPINSSFISVASGSGLLRNSYRQ
PYLGWRSTEKLSQRTPHERLANSLLTQRTAPPSTRAGNETRTLHSVSTEI
QSSIKEVTSAIVHFVNDQQQSQHPRSRSTSPNSRCWLESSFVGTRTLDSP
QTPVIDNSPPELARKQQQLHPHQVHLDVGLSPVVSAGQLPHRMNGINRIG
NGGGESAIQV*

GH01875.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:22:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG42748-PC 1710 CG6448-PB 1..1710 1..1710 8884 100 Plus
CG42748-PB 1710 CG6448-PA 1..1710 1..1710 8884 100 Plus
CG42748-PJ 1717 CG42748-PJ 1..1717 1..1710 8866 99.6 Plus
CG42748-PG 2139 CG42748-PG 1..1707 1..1707 8853 99.8 Plus
CG42748-PK 2190 CG42748-PK 1..1704 1..1703 8840 99.9 Plus