BDGP Sequence Production Resources |
Search the DGRC for GH01922
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 19 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | Trax-RA |
Protein status: | GH01922.pep: gold |
Preliminary Size: | 1029 |
Sequenced Size: | 1099 |
Gene | Date | Evidence |
---|---|---|
CG5063 | 2001-01-01 | Release 2 assignment |
CG5063 | 2001-07-04 | Blastp of sequenced clone |
Trax | 2008-04-29 | Release 5.5 accounting |
Trax | 2008-08-15 | Release 5.9 accounting |
Trax | 2008-12-18 | 5.12 accounting |
1099 bp (1099 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047514
> GH01922.complete AAAATCTAAAAAAATAAAAACAAAAAAAAAAAACATATTTAAGCCGTTCA AATAGAATCGCGTAAGATATCAATAATGCCGAAAAACGGAGGTGCTGGTC ACAGGAACACTGCTCCCAGGAAGCGCCAAATACCGGCTGCCCAGCTGGAT GAAGACAGTCCCATTGTCCAACAATTTCGAATTTATTCTAATGAATTGAT CATGAAACACGATCGCCACGAGCGAATTGTCAAGCTGAGCCGTGACATTA CCATCGAGTCCAAGCGTATCATCTTCCTGCTGCACTCCATTGACTCGCGT AAGCAGAATAAGGAGAAGGTCCTGGAGGAGGCACGTCAGCGACTGAACAA GCTGATCGCGGTTAACTTTAGGGCTGTGGCCCTGGAACTGCGCGACCAGG ATGTCTACCAGTTCCGCAGCTCCTACTCTCCAGGATTGCAGGAGTTTATC GAGGCCTACACCTACATGGAGTACCTGTGCCACGAGGATGCTGAGGGCGA GAACGAAACCAAGAGCGTTTCAGATTGGCAGGCCATTCAGGCGGTGATGC AGTACGTCGAGGAGAGCAGCCAGCCAAAGGAAGAACCAACTGAAGGCGAA GATGTTCAGGCTATAGCTCAGGTTGAGAGCCCAAAGAAGTTCCAGTTTTT CGTAGACCCCACGGAATATATACTTGGACTTTCGGATCTTACTGGTGAAC TGATGCGCCGCTGCATAAATTCGCTAGGCAGTGGAGATACAGACACCTGT TTGGACACCTGCAAGGCCCTGCAGCATTTCTACAGCGGGTTGGTTAGTTC TCCCTTAAGAAACTCAATTAACTTCCTATTGTTTTCAGTTACATCAGTCT AAACTGTCAGAGAGCCCGTGAACTATGGCGTAAGATCACTACCATGAAGC AGAGCGTTCTTAAGGCCGAGAATGTTTGCTACAATGTAAAAGTTCGCGGC GGAGAGGCTGCAAAATGGGGCGCCACTTTTGATCAAAAGCCAGCCGATGA AGTTGACGAGGGCTTCTACTAATGGAACTCCATAGACATAAGTTTTCATC AACAGAATATAATATATATATATAAAGCCTAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trax-RA | 1128 | Trax-RA | 28..1107 | 1..1081 | 5365 | 99.9 | Plus |
Trax-RB | 1121 | Trax-RB | 41..827 | 1..788 | 3900 | 99.8 | Plus |
Trax-RB | 1121 | Trax-RB | 827..1070 | 838..1081 | 1220 | 100 | Plus |
CG6171-RB | 1025 | CG6171-RB | 987..1025 | 1081..1043 | 195 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 11186386..11187464 | 1..1080 | 5350 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 15361751..15362830 | 1..1081 | 5355 | 99.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 15102582..15103661 | 1..1081 | 5365 | 99.9 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 11186428..11187438 | 44..1054 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 1..777 | 76..852 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 28..1106 | 1..1080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 28..1106 | 1..1080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 60..1127 | 1..1069 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 28..1106 | 1..1080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Trax-RA | 60..1127 | 1..1069 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15361751..15362829 | 1..1080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15361751..15362829 | 1..1080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15361751..15362829 | 1..1080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 11187473..11188551 | 1..1080 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 15102582..15103660 | 1..1080 | 99 | Plus |
Translation from 75 to 851
> GH01922.hyp MPKNGGAGHRNTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHER IVKLSRDITIESKRIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRA VALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSD WQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQFFVDPTEYIL GLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGLVSSPLRNSINF LLFSVTSV*
Translation from 75 to 851
> GH01922.pep MPKNGGAGHRNTAPRKRQIPAAQLDEDSPIVQQFRIYSNELIMKHDRHER IVKLSRDITIESKRIIFLLHSIDSRKQNKEKVLEEARQRLNKLIAVNFRA VALELRDQDVYQFRSSYSPGLQEFIEAYTYMEYLCHEDAEGENETKSVSD WQAIQAVMQYVEESSQPKEEPTEGEDVQAIAQVESPKKFQFFVDPTEYIL GLSDLTGELMRRCINSLGSGDTDTCLDTCKALQHFYSGLVSSPLRNSINF LLFSVTSV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18294-PA | 297 | GF18294-PA | 1..240 | 1..241 | 967 | 76.7 | Plus |
Dana\GF20675-PA | 99 | GF20675-PA | 1..82 | 158..237 | 302 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16922-PA | 298 | GG16922-PA | 1..241 | 1..241 | 1223 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16640-PA | 296 | GH16640-PA | 1..240 | 1..241 | 883 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Trax-PC | 298 | CG5063-PC | 1..241 | 1..241 | 1235 | 99.2 | Plus |
Trax-PB | 298 | CG5063-PB | 1..241 | 1..241 | 1235 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22036-PA | 294 | GI22036-PA | 1..238 | 1..241 | 900 | 72.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13728-PA | 299 | GL13728-PA | 1..248 | 1..247 | 885 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18631-PA | 299 | GA18631-PA | 1..248 | 1..247 | 885 | 68.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24228-PA | 298 | GM24228-PA | 1..241 | 1..241 | 1260 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19019-PA | 298 | GD19019-PA | 1..241 | 1..241 | 1270 | 97.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10483-PA | 292 | GJ10483-PA | 1..236 | 1..241 | 879 | 70.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11778-PA | 289 | GK11778-PA | 1..232 | 1..241 | 902 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24305-PA | 298 | GE24305-PA | 1..241 | 1..241 | 1199 | 91.3 | Plus |