![]() | BDGP Sequence Production Resources |
Search the DGRC for GH01933
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 19 |
Well: | 33 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3955-RA |
Protein status: | GH01933.pep: gold |
Preliminary Size: | 1198 |
Sequenced Size: | 1018 |
Gene | Date | Evidence |
---|---|---|
CG3955 | 2001-01-01 | Release 2 assignment |
CG3955 | 2001-10-10 | Blastp of sequenced clone |
CG3955 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3955 | 2008-04-29 | Release 5.5 accounting |
CG3955 | 2008-08-15 | Release 5.9 accounting |
CG3955 | 2008-12-18 | 5.12 accounting |
1018 bp (1018 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060602
> GH01933.complete TCAGATGGAGAGCAGTGGGGTTCACGGAATGAGGAGCACGTAAACAAGAG AACCTCGGGCCACTTTAGATTAGCCAAGGGATTGGGTGGCCAGCAGCAGG ATGATCCGGCCCTTCGTCACGTTGCTCTACTTCCTGCTGACCAGTTCGTC CATCGTGTTCACAGCCTGTGTGAATAATGTGACAGGCACCAGTTCACCCG GACCCGGACCCAGTACCTCGCTGACCAGCGGGCACATTCACCGCACGGCG GCAGCCATCGAAAGGGTGAACAAACTGTGGTGCTTTGCCTGCCACACGAT GGATGATGGGGAGGCCTGCGTGGATGTGGCGGTCCGGAACGATTCCGCAC TGATGAAAAAGTGCCAGGGCGAGGAGTTCATCTGCATGGTCAAGCGGTTC TCGTACACCACCAGCACGGAGAACTCCACCAGTTCGCCCAAGATGTGGTC CCTGGACCGGCGATGTACTGCCAACTGTGAGCCCGGCTGCATCATCATTG GCGAGCGGACCAAGCTCTATTCCTGCACTTCCTGCTGCGAGGAGTCCTTT TGTAATACGGGTCGAGGAGCTGCATCCGGGATCTTCCATCGCGAGGACAC GGGCATCGGCACACGGCTGTTTTGGCTGGCCGCCCCCTTTCTGGTCAACA TGTCGCTGGTCCTGTACAAACGGCACGCCGGCCACGTTCTCCTCAAGCTG CAATAGGCCTTCGGGTCACCTCACAGAATTTACGGACACTCAGCGCTCTC AAAGATGCTCCACACTGAACTCAACTCCACTAAATGCCAAATCCTAGCTA ACTTTAGTTCGATCTCTTCTGCAATGTAGATAGGCCATCATGTTGCCGGG TGATAAGAAGAGCCACAGCGAGTTCACACCCAACAAAACGGAAAATCCTC AATTGGACCCTTGTTTCTGTAGGCTAGTACTAATATTATATTTTACCATG GATTACTTTTAATTAAAAATAGATTTCCCAGATAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3955-RA | 1258 | CG3955-RA | 110..1093 | 1..984 | 4920 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 9015251..9015846 | 983..388 | 2980 | 100 | Minus |
chr2R | 21145070 | chr2R | 9015913..9016124 | 390..179 | 1060 | 100 | Minus |
chr2R | 21145070 | chr2R | 9016196..9016372 | 179..3 | 885 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 13127914..13128510 | 984..388 | 2985 | 100 | Minus |
2R | 25286936 | 2R | 13128577..13128788 | 390..179 | 1060 | 100 | Minus |
2R | 25286936 | 2R | 13128860..13129038 | 179..1 | 895 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 13129113..13129709 | 984..388 | 2985 | 100 | Minus |
2R | 25260384 | 2R | 13129776..13129987 | 390..179 | 1060 | 100 | Minus |
2R | 25260384 | 2R | 13130059..13130237 | 179..1 | 895 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 9015251..9015845 | 389..983 | 100 | <- | Minus |
chr2R | 9015915..9016123 | 180..388 | 100 | <- | Minus |
chr2R | 9016196..9016374 | 1..179 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 1..606 | 101..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 1..606 | 101..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 1..606 | 101..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 1..606 | 101..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 1..606 | 101..706 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 17..999 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 17..999 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 15..997 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 17..999 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3955-RA | 15..997 | 1..983 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13127915..13128509 | 389..983 | 100 | <- | Minus |
2R | 13128579..13128787 | 180..388 | 100 | <- | Minus |
2R | 13128860..13129038 | 1..179 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13127915..13128509 | 389..983 | 100 | <- | Minus |
2R | 13128579..13128787 | 180..388 | 100 | <- | Minus |
2R | 13128860..13129038 | 1..179 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13127915..13128509 | 389..983 | 100 | <- | Minus |
2R | 13128579..13128787 | 180..388 | 100 | <- | Minus |
2R | 13128860..13129038 | 1..179 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 9015420..9016014 | 389..983 | 100 | <- | Minus |
arm_2R | 9016084..9016292 | 180..388 | 100 | <- | Minus |
arm_2R | 9016365..9016543 | 1..179 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 13129114..13129708 | 389..983 | 100 | <- | Minus |
2R | 13129778..13129986 | 180..388 | 100 | <- | Minus |
2R | 13130059..13130237 | 1..179 | 100 | Minus |
Translation from 100 to 705
> GH01933.pep MIRPFVTLLYFLLTSSSIVFTACVNNVTGTSSPGPGPSTSLTSGHIHRTA AAIERVNKLWCFACHTMDDGEACVDVAVRNDSALMKKCQGEEFICMVKRF SYTTSTENSTSSPKMWSLDRRCTANCEPGCIIIGERTKLYSCTSCCEESF CNTGRGAASGIFHREDTGIGTRLFWLAAPFLVNMSLVLYKRHAGHVLLKL Q*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF11987-PA | 201 | GF11987-PA | 1..201 | 1..201 | 975 | 95.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22529-PA | 201 | GG22529-PA | 1..201 | 1..201 | 1073 | 99.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21594-PA | 210 | GH21594-PA | 1..210 | 1..201 | 851 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3955-PA | 201 | CG3955-PA | 1..201 | 1..201 | 1080 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19564-PA | 212 | GI19564-PA | 1..212 | 1..201 | 769 | 77.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10587-PA | 200 | GL10587-PA | 1..198 | 1..199 | 826 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27874-PA | 200 | GA27874-PA | 1..198 | 1..199 | 826 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20314-PA | 201 | GM20314-PA | 1..201 | 1..201 | 1074 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25792-PA | 201 | GD25792-PA | 1..201 | 1..201 | 1074 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21140-PA | 210 | GJ21140-PA | 1..210 | 1..201 | 842 | 82.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK21636-PA | 106 | GK21636-PA | 1..103 | 1..96 | 322 | 73.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13400-PA | 201 | GE13400-PA | 1..201 | 1..201 | 1074 | 100 | Plus |
Translation from 100 to 705
> GH01933.hyp MIRPFVTLLYFLLTSSSIVFTACVNNVTGTSSPGPGPSTSLTSGHIHRTA AAIERVNKLWCFACHTMDDGEACVDVAVRNDSALMKKCQGEEFICMVKRF SYTTSTENSTSSPKMWSLDRRCTANCEPGCIIIGERTKLYSCTSCCEESF CNTGRGAASGIFHREDTGIGTRLFWLAAPFLVNMSLVLYKRHAGHVLLKL Q*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3955-PA | 201 | CG3955-PA | 1..201 | 1..201 | 1080 | 100 | Plus |