BDGP Sequence Production Resources |
Search the DGRC for GH01941
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 19 |
Well: | 41 |
Vector: | pOT2 |
Associated Gene/Transcript | calypso-RA |
Protein status: | GH01941.pep: gold |
Preliminary Size: | 1743 |
Sequenced Size: | 2148 |
Gene | Date | Evidence |
---|---|---|
CG8445 | 2001-01-01 | Release 2 assignment |
CG8445 | 2001-07-04 | Blastp of sequenced clone |
CG8445 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8445 | 2008-04-29 | Release 5.5 accounting |
CG8445 | 2008-08-15 | Release 5.9 accounting |
CG8445 | 2008-12-18 | 5.12 accounting |
2148 bp (2148 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047515
> GH01941.complete CTAAGGCAGATAAGAGGAAGCGCAAAAAACTATTTTGGTCCAAATCGGTA ATATTTTTATATTTAAAATGAATTGGGGACAGAAGATAACCGGCAGCCGA CGGCCCTAACTTCTGGACGGACATCGCCAGTATATGGATTGCTCCTAAAA CTAGCAAACCAACGTACTTATGCTCTATGCAACAATAAATGTCATATGAA AACAAACTATTGAAGACGTTTTTATGAGTATAACCGATTTTCATGTGTAT ATCCTTCTCTGTGCAGAAAAACGAAATTAAAGTAACATCTCGGATACTTT CGCAGCAATTGTATAAGCCATACAAATATGAACGCTGCTGGAGGAGGTAG TGGTGCCCAGGCGGCCGCAGTGGCGGCAGGCAACAACAGTCTCAGCCACA ATGCGCTACTTTCCACGGCCTCAGGAGCCACCACCATGCCTATGGCCCAA CTGGCAGACGGTTGGTTGGAGCTGGAGTCCGACCCAGGTCTCTTCACACT GCTTCTCAAGGATTTTGGATGTCACGATGTACAGGTGGAGGAGGTGTACG ACCTACAGAAACCCATCGAGAGTCCATATGGCTTCATATTTCTCTTCCGC TGGATCGAAGAGCGACGCGCCAGACGCAAAATTGTGGAGACAACTGCTGA GATATTCGTCAAGGATGAGGAGGCCATTTCCAGCATTTTCTTCGCCCAGC AGGTAGTCCCCAATAGCTGTGCCACACACGCGTTGCTTTCGGTGCTCCTG AACTGCAACGAGAACAATCTTCAGCTGGGCGACACCCTGAGTCGACTAAA AACCCACACCAAAGGCATGAGTCCGGAGAACAAGGGGCTGGCTATTGGCA ACACTCCGGAGCTGGCCTGTGCCCATAACTCACACGCAATGCCGCAGGCT CGGCGCCGTCTAGAAAGGACGGGAGCGGGCGTCTCAAGTTGCCGCTTCAC GGGTGAGGCGTTTCACTTCGTTAGCTTTGTGCCTATCAATGGACAACTGT TTGAGCTGGATGGCTTGAAACCGTATCCCATGAATCACGGCGGTTGGGAG GATAGCGAGGATTGGACAGATAAGTTCCGACGTGTGATGGCTGAGCGACT GGGAATAGCGACCGGCGAACAGGACATACGTTTCAATCTCATGGCCGTAG TGCCAGACAGGCGGATTGCCATAACACATAAACTTAAGATGCTGCGCACA AACCAGGCAATCGTGTCCGGAACACTGCAGAAACTTCTAAAGGCCGACGA GCAGGGCGAATCGGGGAACGGAGACTCACAACGTCCGGATACACCCACCA CATTATTGGAGCCGAGCGCTTTCACCGCACGTGACCTGCAATCGCTTCTC AAGAACCTGGACACAGAAATAGCCATCAATGAGCAGCATCTGGCTGACGA AAACGATCGGAGGCACATGTTTAAGGTGGACGCCAGTCGACGTACCCACA ACTACGATAAGTTCATTTGCACTTTCCTCTCTATGCTGGCCCACCAGGGC GTCCTGGGCGAGCTGGTTAGCCAGCATTTGCTTCCGTCGAAGAAGGTCAG TGGCCAGGGTGCTGCCAATCGGATCAGCAAGCAGAGCACCACCGCCAGTG CAGGCGGAAGCACCGCAGCAGGCACTGCATCCACGCCCAAGACTCAGCAA CAGCAGGCTGCGGCCGCTAAGAATGGCAAGTCGCCAAGCAAAACGCCAGG CAGGAGGCGAAAGGGACGCAACAAGTGCAGAAAACGGAAGTAGGCGACCA GACGACCAGCATGTACATGTTTTTAAGAATACAGTTTGCATTTTTAAGAC CATTCATTCCAGTATTGTTTTTCTACAATTTCCCCACCAAGAAGCACCAT TAACCCATAAGATCGTATAAGTTTAGTTTTAGTAACACTCAATGCGGTTC TTTTAAATACGAAATCAACTTGGCAGCTTCATTTTTATTTGATCGCAATT CGATCTTTTTAATAATAAAAAACCATTTTGTTCGTATGAATCGTTTTTCA TGTGGTCCTTGATAGACGAAGGACCCAAATGTGTATGCATTACATATGAA TAATATATATATTTTCTGATATATATCTATATGATAGTTGTATAACAAAA ACGTAATCCTTCAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8445-RA | 2124 | CG8445-RA | 4..2121 | 1..2117 | 10550 | 99.9 | Plus |
CG8445-RB | 2094 | CG8445-RB | 239..2091 | 266..2117 | 9225 | 99.9 | Plus |
CG8445-RB | 2094 | CG8445-RB | 4..240 | 1..237 | 1185 | 100 | Plus |
CG8443.a | 5407 | CG8443.a | 5195..5407 | 2117..1905 | 1065 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 12081384..12082979 | 2115..521 | 7930 | 99.9 | Minus |
chr2R | 21145070 | chr2R | 12083037..12083323 | 522..236 | 1435 | 100 | Minus |
chr2R | 21145070 | chr2R | 12083389..12083624 | 236..1 | 1180 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 16194060..16195657 | 2117..521 | 7940 | 99.9 | Minus |
2R | 25286936 | 2R | 16195715..16196001 | 522..236 | 1435 | 100 | Minus |
2R | 25286936 | 2R | 16196067..16196302 | 236..1 | 1180 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 16195259..16196856 | 2117..521 | 7950 | 99.9 | Minus |
2R | 25260384 | 2R | 16196914..16197200 | 522..236 | 1435 | 100 | Minus |
2R | 25260384 | 2R | 16197266..16197501 | 236..1 | 1180 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12081384..12082979 | 521..2115 | 99 | <- | Minus |
chr2R | 12083039..12083322 | 237..520 | 100 | <- | Minus |
chr2R | 12083389..12083624 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8445-RB | 1..1416 | 328..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
calypso-RA | 1..1416 | 328..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
calypso-RB | 1..1416 | 328..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8445-RB | 1..1416 | 328..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
calypso-RB | 1..1416 | 328..1743 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8445-RA | 1..2116 | 1..2115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
calypso-RA | 1..2116 | 1..2115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
calypso-RA | 32..2147 | 1..2115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8445-RA | 1..2116 | 1..2115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
calypso-RA | 32..2147 | 1..2115 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16194062..16195657 | 521..2115 | 99 | <- | Minus |
2R | 16195717..16196000 | 237..520 | 100 | <- | Minus |
2R | 16196067..16196302 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16194062..16195657 | 521..2115 | 99 | <- | Minus |
2R | 16195717..16196000 | 237..520 | 100 | <- | Minus |
2R | 16196067..16196302 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16194062..16195657 | 521..2115 | 99 | <- | Minus |
2R | 16195717..16196000 | 237..520 | 100 | <- | Minus |
2R | 16196067..16196302 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12081567..12083162 | 521..2115 | 99 | <- | Minus |
arm_2R | 12083222..12083505 | 237..520 | 100 | <- | Minus |
arm_2R | 12083572..12083807 | 1..236 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16195261..16196856 | 521..2115 | 99 | <- | Minus |
2R | 16196916..16197199 | 237..520 | 100 | <- | Minus |
2R | 16197266..16197501 | 1..236 | 100 | Minus |
Translation from 327 to 1742
> GH01941.hyp MNAAGGGSGAQAAAVAAGNNSLSHNALLSTASGATTMPMAQLADGWLELE SDPGLFTLLLKDFGCHDVQVEEVYDLQKPIESPYGFIFLFRWIEERRARR KIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQL GDTLSRLKTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGA GVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHGGWEDSEDWTDKF RRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVSGTL QKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAI NEQHLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQH LLPSKKVSGQGAANRISKQSTTASAGGSTAAGTASTPKTQQQQAAAAKNG KSPSKTPGRRRKGRNKCRKRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
calypso-PA | 471 | CG8445-PA | 1..471 | 1..471 | 2429 | 100 | Plus |
calypso-PB | 471 | CG8445-PB | 1..471 | 1..471 | 2429 | 100 | Plus |
Uch-L5-PB | 324 | CG3431-PB | 1..300 | 39..393 | 444 | 31.9 | Plus |
Uch-L5-PA | 324 | CG3431-PA | 1..300 | 39..393 | 444 | 31.9 | Plus |
Uch-L5R-PA | 340 | CG1950-PA | 15..314 | 36..393 | 433 | 30.9 | Plus |
Translation from 327 to 1742
> GH01941.pep MNAAGGGSGAQAAAVAAGNNSLSHNALLSTASGATTMPMAQLADGWLELE SDPGLFTLLLKDFGCHDVQVEEVYDLQKPIESPYGFIFLFRWIEERRARR KIVETTAEIFVKDEEAISSIFFAQQVVPNSCATHALLSVLLNCNENNLQL GDTLSRLKTHTKGMSPENKGLAIGNTPELACAHNSHAMPQARRRLERTGA GVSSCRFTGEAFHFVSFVPINGQLFELDGLKPYPMNHGGWEDSEDWTDKF RRVMAERLGIATGEQDIRFNLMAVVPDRRIAITHKLKMLRTNQAIVSGTL QKLLKADEQGESGNGDSQRPDTPTTLLEPSAFTARDLQSLLKNLDTEIAI NEQHLADENDRRHMFKVDASRRTHNYDKFICTFLSMLAHQGVLGELVSQH LLPSKKVSGQGAANRISKQSTTASAGGSTAAGTASTPKTQQQQAAAAKNG KSPSKTPGRRRKGRNKCRKRK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12763-PA | 470 | GF12763-PA | 19..470 | 21..471 | 2175 | 91.8 | Plus |
Dana\GF24661-PA | 324 | GF24661-PA | 1..323 | 39..424 | 462 | 32.4 | Plus |
Dana\GF19511-PA | 413 | GF19511-PA | 23..317 | 43..393 | 412 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22294-PA | 471 | GG22294-PA | 1..471 | 1..471 | 2486 | 97.7 | Plus |
Dere\GG14033-PA | 324 | GG14033-PA | 1..314 | 39..415 | 459 | 32.2 | Plus |
Dere\GG19562-PA | 335 | GG19562-PA | 14..307 | 43..393 | 361 | 29.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22997-PA | 462 | GH22997-PA | 2..462 | 3..471 | 2059 | 82.6 | Plus |
Dgri\GH16209-PA | 324 | GH16209-PA | 1..323 | 39..424 | 467 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
calypso-PA | 471 | CG8445-PA | 1..471 | 1..471 | 2429 | 100 | Plus |
calypso-PB | 471 | CG8445-PB | 1..471 | 1..471 | 2429 | 100 | Plus |
Uch-L5-PB | 324 | CG3431-PB | 1..300 | 39..393 | 444 | 31.9 | Plus |
Uch-L5-PA | 324 | CG3431-PA | 1..300 | 39..393 | 444 | 31.9 | Plus |
Uch-L5R-PA | 340 | CG1950-PA | 15..314 | 36..393 | 433 | 30.9 | Plus |
Uch-PC | 224 | CG4265-PC | 4..219 | 46..274 | 156 | 25.2 | Plus |
Uch-PB | 227 | CG4265-PB | 4..222 | 46..274 | 152 | 24.8 | Plus |
Uch-PA | 227 | CG4265-PA | 4..222 | 46..274 | 152 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18963-PA | 461 | GI18963-PA | 21..461 | 37..471 | 2077 | 88.1 | Plus |
Dmoj\GI13355-PA | 324 | GI13355-PA | 1..319 | 39..420 | 471 | 32 | Plus |
Dmoj\GI16929-PA | 229 | GI16929-PA | 4..224 | 46..274 | 157 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10684-PA | 475 | GL10684-PA | 1..475 | 1..471 | 2232 | 89.5 | Plus |
Dper\GL17965-PA | 324 | GL17965-PA | 1..323 | 39..424 | 462 | 32.2 | Plus |
Dper\GL20225-PA | 351 | GL20225-PA | 25..330 | 45..399 | 425 | 29.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21084-PA | 475 | GA21084-PA | 1..475 | 1..471 | 2232 | 89.5 | Plus |
Dpse\GA17448-PA | 324 | GA17448-PA | 1..323 | 39..424 | 462 | 32.2 | Plus |
Dpse\GA26899-PA | 351 | GA26899-PA | 25..346 | 45..415 | 429 | 28.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20083-PA | 471 | GM20083-PA | 1..471 | 1..471 | 2493 | 98.3 | Plus |
Dsec\GM24867-PA | 324 | GM24867-PA | 1..314 | 39..415 | 465 | 31.7 | Plus |
Dsec\GM13220-PA | 340 | GM13220-PA | 15..314 | 30..393 | 432 | 31.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25561-PA | 471 | GD25561-PA | 1..471 | 1..471 | 2496 | 98.3 | Plus |
Dsim\GD12919-PA | 324 | GD12919-PA | 1..314 | 39..415 | 467 | 32.6 | Plus |
Dsim\GD15942-PA | 426 | GD15942-PA | 101..400 | 30..393 | 419 | 29.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20906-PA | 462 | GJ20906-PA | 20..462 | 36..471 | 2077 | 88.1 | Plus |
Dvir\GJ13185-PA | 325 | GJ13185-PA | 1..324 | 39..424 | 452 | 32.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22163-PA | 435 | GK22163-PA | 1..435 | 37..471 | 2173 | 93.3 | Plus |
Dwil\GK22136-PA | 147 | GK22136-PA | 1..145 | 1..133 | 495 | 70.3 | Plus |
Dwil\GK20334-PA | 324 | GK20334-PA | 1..323 | 39..424 | 467 | 31.2 | Plus |
Dwil\GK16481-PA | 376 | GK16481-PA | 27..333 | 43..393 | 416 | 31.5 | Plus |
Dwil\GK15133-PA | 227 | GK15133-PA | 4..222 | 46..274 | 154 | 26.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE14091-PA | 471 | GE14091-PA | 1..471 | 1..471 | 2483 | 97.9 | Plus |
Dyak\GE21236-PA | 324 | GE21236-PA | 1..314 | 39..415 | 458 | 32.5 | Plus |
Dyak\GE16722-PA | 329 | GE16722-PA | 18..307 | 46..393 | 392 | 30.6 | Plus |