BDGP Sequence Production Resources |
Search the DGRC for GH01984
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 19 |
Well: | 84 |
Vector: | pOT2 |
Associated Gene/Transcript | Oat-RA |
Protein status: | GH01984.pep: gold |
Preliminary Size: | 1480 |
Sequenced Size: | 1498 |
Gene | Date | Evidence |
---|---|---|
CG8782 | 2001-01-01 | Release 2 assignment |
CG8782 | 2001-07-04 | Blastp of sequenced clone |
CG8782 | 2003-01-01 | Sim4 clustering to Release 3 |
Oat | 2008-04-29 | Release 5.5 accounting |
Oat | 2008-08-15 | Release 5.9 accounting |
Oat | 2008-12-18 | 5.12 accounting |
1498 bp (1498 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047517
> GH01984.complete CCGCGATCCGCGAGTACAAGTGCCATACCCCATCGACTCGCGAGATACAT ACATACATACTATCGCCAACATGTTCGCCAAGCTATCAGCCCGCGGGATC GCCACCCGCATGAGCTTCTTGGCACAGAAGACAGCTTCCCAGGAGACGAC GGCCGCCGCCGGATCCCGTTCCGAACTCGTCTATGCCAGGGAGAACAAGT ACGGCGCCCACAACTACCACCCACTGCCCGTGGCCCTGACCAAGGGCGAG GGCGTGTTTGTCTGGGATGTGGAGGGCAAGCGCTACTTCGACTATCTGAG CGCCTACTCGGCGGTCAACCAGGGTCACTGCCATCCCAAGATCGTAGCGG CACTCACAGCACAGGCCTCCAAGTTGGCCTTGACATCGCGTGCCTTCTAT TCGGATGTCCTTGGAGAGTACGAGGAGTACGTGACCAAGCTCTTTGGCTT CGACAAGGTGCTGCCCATGAACACGGGCGTTGAGGGCGGAGAAACCGCCT GCAAGTTGGCCCGCAAGTGGGGCTACCTGGAGAAGAAGATACCTGCCAAC CAGGCAAAGATCATCTTCGCGCGCAACAACTTCTGGGGACGCACCCTGTC GGCGGTGTCCGCCTCCAATGATCCCAGTAGCTACGAGGGATTCGGACCCT TCATGCCCGGATTCGAGCTGATCGAGTACGACAATGTGTCAGCGCTGGAG GAGTCCCTCAAGGATCCGAATGTGTGCGCCTTCATGGTGGAGCCCATTCA GGGAGAGGCTGGCGTGGTGGTGCCCAGTGATGGCTATCTGAAGAAGGTGC GAGAGCTCTGCACCAAGTACAATGTGCTCTGGATTGCCGACGAGGTGCAG ACAGGATTGGCCAGAACTGGAAAGCTGCTGGCCGTGGACTACGAGCAGGT GCAGCCAGACATTCTGATCCTGGGAAAAGCACTGTCCGGAGGAATGTATC CCGTGTCGGCGGTTCTCTGCAACGACCAGGTGATGCTGTGCATCAAGCCG GGCGAGCACGGATCCACCTACGGAGGCAACCCCCTGGGCTGCCGAGTGGC CATGGCCGCCTTGGAGGTTCTGCAGGAGGAGAAGCTGGCGGAGAACGCCT TCAAAATGGGTGACCTGCTGCGCAACGAGCTGTCCACGCTGCCCAAGGAT GTGGTGTCGGTGGTGCGCGGAAAGGGTCTGCTCAACGCCATCGTTATTAA CCAGAAGTTCGATGCCTGGGAGGTGTGCCTCAGGCTAAAGGAGAACGGAC TCCTGGCCAAGCCCACCCATGGCGACATTATTCGCTTCGCTCCTCCACTG GTCATCAATGAGACCCAAATGCGCGAGAGCATCGACATAATCAGGAAAAC CATTCTGTCCATGTAGATTTTGGTGTCAGTGGAGCACCGCTCATGTATAG CGAATAGCGTTTAACAGAATGTAAATTAAGTTTTGTGGAAAGTCTGAAAT AAAATACACTTTTAATACTTTTTATACCAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Oat-RA | 1673 | Oat-RA | 133..1614 | 1..1482 | 7410 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 19636947..19637762 | 1205..390 | 4035 | 99.6 | Minus |
chr3L | 24539361 | chr3L | 19638777..19639166 | 390..1 | 1950 | 100 | Minus |
chr3L | 24539361 | chr3L | 19636616..19636890 | 1480..1206 | 1375 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 19647611..19648426 | 1205..390 | 4080 | 100 | Minus |
3L | 28110227 | 3L | 19649441..19649830 | 390..1 | 1950 | 100 | Minus |
3L | 28110227 | 3L | 19647278..19647554 | 1482..1206 | 1385 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 19640711..19641526 | 1205..390 | 4080 | 100 | Minus |
3L | 28103327 | 3L | 19642541..19642930 | 390..1 | 1950 | 100 | Minus |
3L | 28103327 | 3L | 19640378..19640654 | 1482..1206 | 1385 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 19636616..19636890 | 1206..1480 | 100 | <- | Minus |
chr3L | 19636947..19637761 | 391..1205 | 99 | <- | Minus |
chr3L | 19638777..19639166 | 1..390 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 1..1296 | 71..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 1..1296 | 71..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 1..1296 | 71..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 1..1296 | 71..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 1..1296 | 71..1366 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 20..1499 | 1..1480 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 20..1499 | 1..1480 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 22..1501 | 1..1480 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 20..1499 | 1..1480 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Oat-RA | 22..1501 | 1..1480 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19647280..19647554 | 1206..1480 | 100 | <- | Minus |
3L | 19647611..19648425 | 391..1205 | 100 | <- | Minus |
3L | 19649441..19649830 | 1..390 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19647280..19647554 | 1206..1480 | 100 | <- | Minus |
3L | 19647611..19648425 | 391..1205 | 100 | <- | Minus |
3L | 19649441..19649830 | 1..390 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19647280..19647554 | 1206..1480 | 100 | <- | Minus |
3L | 19647611..19648425 | 391..1205 | 100 | <- | Minus |
3L | 19649441..19649830 | 1..390 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 19640380..19640654 | 1206..1480 | 100 | <- | Minus |
arm_3L | 19640711..19641525 | 391..1205 | 100 | <- | Minus |
arm_3L | 19642541..19642930 | 1..390 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 19640380..19640654 | 1206..1480 | 100 | <- | Minus |
3L | 19640711..19641525 | 391..1205 | 100 | <- | Minus |
3L | 19642541..19642930 | 1..390 | 100 | Minus |
Translation from 1 to 1365
> GH01984.hyp RDPRVQVPYPIDSRDTYIHTIANMFAKLSARGIATRMSFLAQKTASQETT AAAGSRSELVYARENKYGAHNYHPLPVALTKGEGVFVWDVEGKRYFDYLS AYSAVNQGHCHPKIVAALTAQASKLALTSRAFYSDVLGEYEEYVTKLFGF DKVLPMNTGVEGGETACKLARKWGYLEKKIPANQAKIIFARNNFWGRTLS AVSASNDPSSYEGFGPFMPGFELIEYDNVSALEESLKDPNVCAFMVEPIQ GEAGVVVPSDGYLKKVRELCTKYNVLWIADEVQTGLARTGKLLAVDYEQV QPDILILGKALSGGMYPVSAVLCNDQVMLCIKPGEHGSTYGGNPLGCRVA MAALEVLQEEKLAENAFKMGDLLRNELSTLPKDVVSVVRGKGLLNAIVIN QKFDAWEVCLRLKENGLLAKPTHGDIIRFAPPLVINETQMRESIDIIRKT ILSM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Oat-PA | 431 | CG8782-PA | 1..431 | 24..454 | 2226 | 100 | Plus |
CG11241-PA | 508 | CG11241-PA | 80..500 | 76..451 | 372 | 28 | Plus |
CG11241-PC | 518 | CG11241-PC | 80..484 | 76..435 | 355 | 28.4 | Plus |
CG11241-PB | 518 | CG11241-PB | 80..484 | 76..435 | 355 | 28.4 | Plus |
CG8745-PA | 494 | CG8745-PA | 37..438 | 72..442 | 297 | 25.6 | Plus |
Translation from 70 to 1365
> GH01984.pep MFAKLSARGIATRMSFLAQKTASQETTAAAGSRSELVYARENKYGAHNYH PLPVALTKGEGVFVWDVEGKRYFDYLSAYSAVNQGHCHPKIVAALTAQAS KLALTSRAFYSDVLGEYEEYVTKLFGFDKVLPMNTGVEGGETACKLARKW GYLEKKIPANQAKIIFARNNFWGRTLSAVSASNDPSSYEGFGPFMPGFEL IEYDNVSALEESLKDPNVCAFMVEPIQGEAGVVVPSDGYLKKVRELCTKY NVLWIADEVQTGLARTGKLLAVDYEQVQPDILILGKALSGGMYPVSAVLC NDQVMLCIKPGEHGSTYGGNPLGCRVAMAALEVLQEEKLAENAFKMGDLL RNELSTLPKDVVSVVRGKGLLNAIVINQKFDAWEVCLRLKENGLLAKPTH GDIIRFAPPLVINETQMRESIDIIRKTILSM*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\Oat-PA | 432 | GF10718-PA | 1..432 | 1..431 | 2146 | 92.6 | Plus |
Dana\GF23448-PA | 466 | GF23448-PA | 38..458 | 53..428 | 401 | 28.9 | Plus |
Dana\GF19062-PA | 495 | GF19062-PA | 17..450 | 32..431 | 314 | 25.3 | Plus |
Dana\GF10831-PA | 486 | GF10831-PA | 67..483 | 58..428 | 198 | 24.1 | Plus |
Dana\GF10832-PA | 326 | GF10832-PA | 22..323 | 148..428 | 159 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13385-PA | 430 | GG13385-PA | 1..430 | 1..431 | 2223 | 96.1 | Plus |
Dere\GG13171-PA | 502 | GG13171-PA | 74..494 | 53..428 | 387 | 28.6 | Plus |
Dere\GG13754-PA | 494 | GG13754-PA | 17..450 | 32..431 | 313 | 25.3 | Plus |
Dere\GG13352-PA | 486 | GG13352-PA | 67..486 | 58..431 | 229 | 24.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14619-PA | 433 | GH14619-PA | 1..433 | 1..431 | 1990 | 82.9 | Plus |
Dgri\GH24027-PA | 433 | GH24027-PA | 1..433 | 1..431 | 1986 | 82.7 | Plus |
Dgri\GH14768-PA | 503 | GH14768-PA | 74..491 | 53..424 | 401 | 27.5 | Plus |
Dgri\GH17687-PA | 495 | GH17687-PA | 9..450 | 19..431 | 331 | 25.9 | Plus |
Dgri\GH17185-PA | 469 | GH17185-PA | 49..469 | 58..431 | 209 | 23.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Oat-PA | 431 | CG8782-PA | 1..431 | 1..431 | 2226 | 100 | Plus |
CG11241-PA | 508 | CG11241-PA | 80..500 | 53..428 | 372 | 28 | Plus |
CG11241-PC | 518 | CG11241-PC | 80..484 | 53..412 | 355 | 28.4 | Plus |
CG11241-PB | 518 | CG11241-PB | 80..484 | 53..412 | 355 | 28.4 | Plus |
CG8745-PA | 494 | CG8745-PA | 37..438 | 49..419 | 297 | 25.6 | Plus |
Gabat-PD | 486 | CG7433-PD | 67..483 | 58..428 | 229 | 24.6 | Plus |
Gabat-PC | 486 | CG7433-PC | 67..483 | 58..428 | 229 | 24.6 | Plus |
Gabat-PA | 486 | CG7433-PA | 67..483 | 58..428 | 229 | 24.6 | Plus |
Gabat-PB | 486 | CG7433-PB | 67..483 | 58..428 | 229 | 24.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI13506-PA | 431 | GI13506-PA | 1..431 | 1..431 | 1973 | 82.1 | Plus |
Dmoj\GI11871-PA | 491 | GI11871-PA | 62..483 | 53..428 | 396 | 28.1 | Plus |
Dmoj\GI21508-PA | 506 | GI21508-PA | 9..450 | 19..431 | 316 | 25.5 | Plus |
Dmoj\GI13950-PA | 469 | GI13950-PA | 49..469 | 58..431 | 225 | 24.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20876-PA | 433 | GL20876-PA | 1..433 | 1..431 | 2058 | 88.7 | Plus |
Dper\GL18115-PA | 495 | GL18115-PA | 81..487 | 53..428 | 375 | 27.4 | Plus |
Dper\GL14846-PA | 302 | GL14846-PA | 29..257 | 218..431 | 235 | 29.4 | Plus |
Dper\GL11898-PA | 487 | GL11898-PA | 67..487 | 58..431 | 223 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21318-PA | 433 | GA21318-PA | 1..433 | 1..431 | 2089 | 89.8 | Plus |
Dpse\GA10859-PA | 509 | GA10859-PA | 81..501 | 53..428 | 396 | 28.2 | Plus |
Dpse\GA26338-PA | 497 | GA26338-PA | 1..452 | 14..431 | 325 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16950-PA | 431 | GM16950-PA | 1..431 | 1..431 | 2262 | 97.2 | Plus |
Dsec\GM22081-PA | 508 | GM22081-PA | 80..500 | 53..428 | 390 | 28.4 | Plus |
Dsec\GM14750-PA | 486 | GM14750-PA | 67..486 | 58..431 | 226 | 25.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12261-PA | 137 | GD12261-PA | 1..136 | 1..136 | 712 | 97.8 | Plus |
Dsim\GD12262-PA | 86 | GD12262-PA | 1..86 | 346..431 | 445 | 96.5 | Plus |
Dsim\GD12056-PA | 508 | GD12056-PA | 80..500 | 53..428 | 382 | 28.6 | Plus |
Dsim\GD12648-PA | 494 | GD12648-PA | 17..450 | 32..431 | 309 | 24.9 | Plus |
Dsim\GD12233-PA | 486 | GD12233-PA | 67..486 | 58..431 | 231 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11867-PA | 433 | GJ11867-PA | 1..433 | 1..431 | 1966 | 81.8 | Plus |
Dvir\GJ13565-PA | 503 | GJ13565-PA | 74..495 | 53..428 | 404 | 29 | Plus |
Dvir\GJ19045-PA | 500 | GJ19045-PA | 1..450 | 14..431 | 314 | 24.8 | Plus |
Dvir\GJ13734-PA | 469 | GJ13734-PA | 49..469 | 58..431 | 222 | 23.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25792-PA | 428 | GK25792-PA | 1..428 | 1..431 | 1981 | 85.2 | Plus |
Dwil\GK20568-PA | 495 | GK20568-PA | 65..488 | 53..428 | 390 | 27.9 | Plus |
Dwil\GK24849-PA | 495 | GK24849-PA | 17..450 | 32..431 | 347 | 26.4 | Plus |
Dwil\GK20289-PA | 474 | GK20289-PA | 54..474 | 58..431 | 224 | 25.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22477-PA | 430 | GE22477-PA | 1..430 | 1..431 | 2234 | 96.8 | Plus |
Dyak\GE19492-PA | 474 | GE19492-PA | 46..466 | 53..428 | 380 | 28.2 | Plus |
Dyak\GE20050-PA | 494 | GE20050-PA | 17..450 | 32..431 | 313 | 25.1 | Plus |
Dyak\GE22444-PA | 486 | GE22444-PA | 67..486 | 58..431 | 228 | 25.2 | Plus |