Clone GH01991 Report

Search the DGRC for GH01991

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:19
Well:91
Vector:pOT2
Associated Gene/TranscriptCG1791-RB
Protein status:GH01991.pep: gold
Preliminary Size:1304
Sequenced Size:1190

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG1791 2001-01-01 Release 2 assignment
CG1791 2002-06-12 Blastp of sequenced clone
CG1791 2008-04-29 Release 5.5 accounting
CG1791 2008-08-15 Release 5.9 accounting
CG1791 2008-12-18 5.12 accounting

Clone Sequence Records

GH01991.complete Sequence

1190 bp (1190 high quality bases) assembled on 2002-06-12

GenBank Submission: AY122085

> GH01991.complete
CAACTGCGTTGCATTCGCTGGCATCATTTTTAGCCTGAAATCGGAACACG
TACGTCGGTGTAAATATATATAATTAAATCGCGATGGCGCTGGAGGCGCT
CGTCACGGCTTTGGCTTGCCTCAGCACCACCACAAATGCCACGAGTAACT
TGCCAGGAAAACACTTTTCCGTGATAATGAGAAACTCGGCGGAGCCCTTT
TTGCTGGCTGAAAATGATACCGCCAGTTGTCCAGTAAGCACTTTGGCTGG
CTTAGCAGCACGTGTACAATTCATGACAGATGAGCTGCAAAATCTCAAAA
CAGAGCTTAATGAGCTACAGGGACTCATTGAGGAGTATAAAAATCAGGGC
ACCGGAATACCCATTGCAACCAGGTTGTAAGTTAATAAAGACTTCGCCCA
TTGCCAGCAAGTGTGCAGACCTTTCCGTTGGCGCTGGCCACGCCCCCCGA
CGATACGCCCCGAAATTGCTACGATGAGAAGCATGGTCAGGTGAGGATCC
GAATTGCTCCGGATATGGAACCCTTCTTCGCGAGCTGTGACCAGAAAGTG
AGAGATGGTGGCTGGATGGTGATCGCCTATAGATTCGATGGCAGCGAGGA
CTTCAACAAGGATTGGCAGAACTATAAGGCCGGTTTTGGCGCTTTAAACT
CGGAGTTCTTTATCGGATTGGATAAGCTGCACAGGTTGACCAACAGTGAG
CACCACGAGTTGCTCATCATAATGAAGAAGAAAAGTGGAGAGGAACGTTT
CGCGCTGTACGATCACTTCAGTATTGGCAGTGAATCGGAAAAGTATCTTC
TATATGTACTTGGTGCCTACAAAGGTGATGCTGGTGATTCGCTACGTTAC
CATGCGGGCAAGAAGTTCACCACATTCGATCAGGATAACGACGATAATGG
CCAAAACTGCGCCAGGACGCATGCAGGTGCCTGGTGGTATGGAAGGGAGT
GCTTCGAGAGCAACTTGTTTGGTACATTCCAGTCGAAGTACGGACAGGAG
ATTGGCTATTTCAAGGGCATCCTGTGGAAATCCTTCCTGCCAGGACCCAC
TGGCTCGCTTAGCTATGTCCGCATGCTCATCCGGCCGCTCAAGAAACAGT
AGACGAAGCTATCACATATTCAATCACAAAGACTCCTCAGGCATAGAATA
CAATAAATGTCGATTATTTAACAAAAAAAAAAAAAAAAAA

GH01991.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:48:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG1791-RB 1193 CG1791-RB 22..1193 1..1172 5860 100 Plus
CG1791-RA 1292 CG1791-RA 511..1292 391..1172 3910 100 Plus
CG1791-RA 1292 CG1791-RA 135..510 1..376 1880 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 06:38:10
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 9855376..9855947 960..389 2830 99.7 Minus
chrX 22417052 chrX 9856293..9856508 216..1 1080 100 Minus
chrX 22417052 chrX 9855104..9855317 1172..959 1070 100 Minus
chrX 22417052 chrX 9856003..9856131 390..262 645 100 Minus
chrX 22417052 chrX 9856189..9856235 262..216 235 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:27:13 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9963725..9964296 960..389 2860 100 Minus
X 23542271 X 9964642..9964857 216..1 1080 100 Minus
X 23542271 X 9963451..9963666 1174..959 1080 100 Minus
X 23542271 X 9964352..9964480 390..262 645 100 Minus
X 23542271 X 9964538..9964584 262..216 235 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:21:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 9971823..9972394 960..389 2860 100 Minus
X 23527363 X 9972740..9972955 216..1 1080 100 Minus
X 23527363 X 9971549..9971764 1174..959 1080 100 Minus
X 23527363 X 9972450..9972578 390..262 645 100 Minus
X 23527363 X 9972636..9972682 262..216 235 100 Minus
Blast to na_te.dros performed on 2019-03-16 06:38:08 has no hits.

GH01991.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 06:38:57 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 9855104..9855315 961..1172 100 <- Minus
chrX 9855376..9855945 391..960 99 <- Minus
chrX 9856003..9856130 263..390 100 <- Minus
chrX 9856189..9856235 216..262 100 <- Minus
chrX 9856294..9856508 1..215 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:06:20 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..293 84..376 100 == Plus
CG1791-RA 294..1005 391..1102 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:23:38 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..293 84..376 100 == Plus
CG1791-RA 294..1005 391..1102 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:40:33 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..293 84..376 100 == Plus
CG1791-RA 294..1005 391..1102 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:14:18 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..293 84..376 100 == Plus
CG1791-RA 294..1005 391..1102 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:18:38 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RA 1..293 84..376 100 == Plus
CG1791-RA 294..1005 391..1102 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 20:50:48 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RB 22..1193 1..1172 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:23:38 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RB 22..1193 1..1172 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:40:33 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RB 22..1193 1..1172 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:14:19 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RB 22..1193 1..1172 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:18:38 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
CG1791-RB 22..1193 1..1172 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:57 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
X 9964643..9964857 1..215 100   Minus
X 9963453..9963664 961..1172 100 <- Minus
X 9963725..9964294 391..960 100 <- Minus
X 9964352..9964479 263..390 100 <- Minus
X 9964538..9964584 216..262 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:57 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
X 9964643..9964857 1..215 100   Minus
X 9963453..9963664 961..1172 100 <- Minus
X 9963725..9964294 391..960 100 <- Minus
X 9964352..9964479 263..390 100 <- Minus
X 9964538..9964584 216..262 100 <- Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 06:38:57 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
X 9964643..9964857 1..215 100   Minus
X 9963453..9963664 961..1172 100 <- Minus
X 9963725..9964294 391..960 100 <- Minus
X 9964352..9964479 263..390 100 <- Minus
X 9964538..9964584 216..262 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:40:33 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9857486..9857697 961..1172 100 <- Minus
arm_X 9857758..9858327 391..960 100 <- Minus
arm_X 9858385..9858512 263..390 100 <- Minus
arm_X 9858571..9858617 216..262 100 <- Minus
arm_X 9858676..9858890 1..215 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:47:14 Download gff for GH01991.complete
Subject Subject Range Query Range Percent Splice Strand
X 9972741..9972955 1..215 100   Minus
X 9971551..9971762 961..1172 100 <- Minus
X 9971823..9972392 391..960 100 <- Minus
X 9972450..9972577 263..390 100 <- Minus
X 9972636..9972682 216..262 100 <- Minus

GH01991.pep Sequence

Translation from 514 to 1101

> GH01991.pep
MEPFFASCDQKVRDGGWMVIAYRFDGSEDFNKDWQNYKAGFGALNSEFFI
GLDKLHRLTNSEHHELLIIMKKKSGEERFALYDHFSIGSESEKYLLYVLG
AYKGDAGDSLRYHAGKKFTTFDQDNDDNGQNCARTHAGAWWYGRECFESN
LFGTFQSKYGQEIGYFKGILWKSFLPGPTGSLSYVRMLIRPLKKQ*

GH01991.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 05:31:56
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF19143-PA 324 GF19143-PA 127..323 2..194 918 83.2 Plus
Dana\GF19159-PA 338 GF19159-PA 144..334 1..191 619 57.6 Plus
Dana\GF13877-PA 250 GF13877-PA 63..245 3..191 442 48.4 Plus
Dana\GF21732-PA 302 GF21732-PA 111..299 3..191 416 48.2 Plus
Dana\GF12980-PA 268 GF12980-PA 74..263 3..191 407 46.2 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 05:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG18953-PA 334 GG18953-PA 141..334 2..195 1033 96.4 Plus
Dere\GG18333-PA 332 GG18333-PA 140..328 3..191 641 59.3 Plus
Dere\GG24402-PA 218 GG24402-PA 27..212 2..193 447 47.4 Plus
Dere\GG23629-PA 277 GG23629-PA 83..271 1..191 415 43.5 Plus
Dere\GG24228-PA 227 GG24228-PA 42..224 2..191 414 46.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 05:31:57
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12910-PA 320 GH12910-PA 125..318 1..194 880 79.4 Plus
Dgri\GH11810-PA 331 GH11810-PA 137..326 2..191 570 53.2 Plus
Dgri\GH22716-PA 425 GH22716-PA 228..408 2..191 468 48.4 Plus
Dgri\GH23089-PA 257 GH23089-PA 73..256 3..193 451 49.7 Plus
Dgri\GH23081-PA 301 GH23081-PA 105..289 2..193 434 45.8 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:07:33
Subject Length Description Subject Range Query Range Score Percent Strand
CG1791-PB 195 CG1791-PB 1..195 1..195 1069 100 Plus
CG1791-PC 333 CG1791-PC 139..333 1..195 1069 100 Plus
CG1791-PA 334 CG1791-PA 140..334 1..195 1069 100 Plus
CG1889-PC 332 CG1889-PC 138..328 1..191 631 58.6 Plus
CG1889-PA 332 CG1889-PA 138..328 1..191 631 58.6 Plus
CG1889-PD 338 CG1889-PD 144..334 1..191 631 58.6 Plus
CG30281-PA 291 CG30281-PA 86..273 1..191 426 46.7 Plus
CG8642-PB 429 CG8642-PB 228..412 3..191 410 47.1 Plus
CG31832-PB 227 CG31832-PB 42..224 2..191 409 45 Plus
CG9500-PB 292 CG9500-PB 98..286 1..191 408 44.1 Plus
CG6788-PA 358 CG6788-PA 180..355 16..191 402 46.9 Plus
CG10359-PG 459 CG10359-PG 266..452 2..194 375 45 Plus
CG10359-PE 485 CG10359-PE 292..478 2..194 375 45 Plus
CG30280-PD 288 CG30280-PD 88..278 1..191 373 39.2 Plus
CG5550-PA 246 CG5550-PA 63..245 8..191 366 40.5 Plus
CG5550-PB 250 CG5550-PB 63..249 8..191 351 39.7 Plus
CG41520-PD 627 CG41520-PD 429..614 8..191 304 38.2 Plus
CG41520-PA 745 CG41520-PA 547..732 8..191 304 38.2 Plus
CG41520-PB 729 CG41520-PB 547..716 8..191 266 35.6 Plus
sca-PB 799 CG17579-PB 572..709 16..155 265 37.9 Plus
sca-PA 799 CG17579-PA 572..709 16..155 265 37.9 Plus
CG9593-PB 382 CG9593-PB 196..371 17..192 239 32.4 Plus
CG7668-PC 422 CG7668-PC 245..421 2..192 233 34.9 Plus
CG7668-PA 422 CG7668-PA 245..421 2..192 233 34.9 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 05:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14614-PA 322 GI14614-PA 129..321 1..194 782 71.6 Plus
Dmoj\GI18820-PA 211 GI18820-PA 15..202 1..191 439 47.7 Plus
Dmoj\GI18379-PA 330 GI18379-PA 141..330 1..195 434 46.9 Plus
Dmoj\GI20830-PA 239 GI20830-PA 50..239 2..193 417 45.1 Plus
Dmoj\GI18819-PA 214 GI18819-PA 1..191 1..191 413 44.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 05:31:58
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL16385-PA 352 GL16385-PA 157..347 1..191 577 56.5 Plus
Dper\GL26564-PA 224 GL26564-PA 31..216 3..195 470 47.7 Plus
Dper\GL11471-PA 436 GL11471-PA 229..396 3..172 408 48.8 Plus
Dper\GL11776-PA 236 GL11776-PA 30..217 1..191 378 44.6 Plus
Dper\GL18754-PA 239 GL18754-PA 45..234 2..191 377 44 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 05:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14719-PA 324 GA14719-PA 130..322 2..194 899 83.4 Plus
Dpse\GA15110-PA 338 GA15110-PA 143..333 1..191 550 53.9 Plus
Dpse\GA28982-PA 271 GA28982-PA 78..263 3..195 478 48.2 Plus
Dpse\GA21232-PA 434 GA21232-PA 229..413 3..191 433 48.7 Plus
Dpse\GA25261-PA 262 GA25261-PA 59..250 1..191 400 44.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 05:31:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM18824-PA 334 GM18824-PA 141..334 2..195 1029 96.4 Plus
Dsec\GM18826-PA 242 GM18826-PA 48..238 1..191 623 58.6 Plus
Dsec\GM14577-PA 227 GM14577-PA 42..224 2..191 409 45.5 Plus
Dsec\GM20674-PA 418 GM20674-PA 217..401 3..191 407 47.1 Plus
Dsec\GM17946-PA 293 GM17946-PA 99..287 1..191 400 44.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 05:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24553-PA 306 GD24553-PA 113..306 2..195 1033 97.4 Plus
Dsim\GD24781-PA 332 GD24781-PA 138..328 1..191 634 58.6 Plus
Dsim\GD11645-PA 292 GD11645-PA 87..274 1..191 401 46.2 Plus
Dsim\GD22585-PA 292 GD22585-PA 98..286 1..191 398 43.5 Plus
Dsim\GD17373-PA 358 GD17373-PA 169..355 1..191 390 45.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 05:32:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ19428-PA 324 GJ19428-PA 130..323 1..194 907 84 Plus
Dvir\GJ18721-PA 346 GJ18721-PA 151..341 1..191 618 56.5 Plus
Dvir\GJ12860-PA 287 GJ12860-PA 91..279 1..191 447 48.4 Plus
Dvir\GJ20563-PA 242 GJ20563-PA 53..242 2..193 415 45.1 Plus
Dvir\GJ21846-PA 238 GJ21846-PA 25..215 1..191 414 44.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 05:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25564-PA 336 GK25564-PA 142..335 1..194 940 85.1 Plus
Dwil\GK25364-PA 337 GK25364-PA 141..331 1..191 611 56 Plus
Dwil\GK19440-PA 291 GK19440-PA 98..282 3..191 410 47.6 Plus
Dwil\GK19592-PA 195 GK19592-PA 2..191 1..191 407 45.4 Plus
Dwil\GK21394-PA 313 GK21394-PA 84..271 1..191 407 44.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 05:32:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE15425-PA 335 GE15425-PA 142..335 2..195 1037 97.4 Plus
Dyak\GE17819-PA 332 GE17819-PA 138..328 1..191 619 56 Plus
Dyak\GE12242-PA 288 GE12242-PA 87..274 1..191 419 47.2 Plus
Dyak\GE24720-PA 227 GE24720-PA 42..224 2..191 409 45.5 Plus
Dyak\GE18450-PA 249 GE18450-PA 55..243 1..191 395 43.6 Plus

GH01991.hyp Sequence

Translation from 514 to 1101

> GH01991.hyp
MEPFFASCDQKVRDGGWMVIAYRFDGSEDFNKDWQNYKAGFGALNSEFFI
GLDKLHRLTNSEHHELLIIMKKKSGEERFALYDHFSIGSESEKYLLYVLG
AYKGDAGDSLRYHAGKKFTTFDQDNDDNGQNCARTHAGAWWYGRECFESN
LFGTFQSKYGQEIGYFKGILWKSFLPGPTGSLSYVRMLIRPLKKQ*

GH01991.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:24:04
Subject Length Description Subject Range Query Range Score Percent Strand
CG1791-PB 195 CG1791-PB 1..195 1..195 1069 100 Plus
CG1791-PC 333 CG1791-PC 139..333 1..195 1069 100 Plus
CG1791-PA 334 CG1791-PA 140..334 1..195 1069 100 Plus
CG1889-PC 332 CG1889-PC 138..328 1..191 631 58.6 Plus
CG1889-PA 332 CG1889-PA 138..328 1..191 631 58.6 Plus