BDGP Sequence Production Resources |
Search the DGRC for GH02216
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 22 |
Well: | 16 |
Vector: | pOT2 |
Associated Gene/Transcript | vir-1-RC |
Protein status: | GH02216.pep: gold |
Preliminary Size: | 1351 |
Sequenced Size: | 1217 |
Gene | Date | Evidence |
---|---|---|
CG31764 | 2002-03-19 | Blastp of sequenced clone |
vir-1 | 2008-04-29 | Release 5.5 accounting |
vir-1 | 2008-08-15 | Release 5.9 accounting |
Obp49a | 2008-08-15 | Release 5.9 accounting |
vir-1 | 2008-12-18 | 5.12 accounting |
Obp49a | 2008-12-18 | 5.12 accounting |
1217 bp (1217 high quality bases) assembled on 2002-03-19
GenBank Submission: AY094667
> GH02216.complete AAAATGCTTTCAAAATCGCAGCTATTACTGCTCGTTGTCGGGTTCTGCCT GAATGCAGCCGTCTCGGCTGACGTGGACTGCAGCAAGCGGCCATCGTTTG TCAATCCCAAAACCTGTTGTCCAATGCCGGACTTCGTGACCGCCGAGTTG AAGCAAAAGTGCATCAACTCGGCTTTCCGCACAGAACAAAACTGAACAGA ATCGAATCCGGTTGCCGGTCCACATCAACGCATCAAAGCTTTCAGCCCTA AATAAACTATACAAATTAAACAAATTATAAGCTTGTGAAAAAAAAAAAAC CAAACAAAAATGAAGCTCTTGTTCGGTTTGCTGATGACCGTGCTAGCCCT TAGCGGCGTTTTCACATTGCCAGCGCGCAACGATCCACAGGACGATGCGG AAGTGATTAAAGTACCATCACGCCCTCAGCCCGAATCGGATTTCCATAAC TTCCGCGGCGTCATCGATACCGGCTCTGGTTATCCCTTCCTTCAGCCGAA TCCTTCGAGCTTCAATGTGGGCATCTTCGACTCCTTCGATGATCTCTTCC GCCGTCTGCGCACCCGTTTGTGGCCTGTAATTGGCAGGGATTCCGGTGAG GAGGGCGCTTCTCCGACTGGCGACTCTGATGATTCTAGTGATGGCAGCGG AGCAGGCTTTCCATTTGGAGTGCGTCCTCTGATTCCGCTGGACTCGAAGA ACGCCAACACCACTTCCACCATTAAGGTTGTCAATGGCCATAAGGTTGAG ATCAACGAGACTGTGTATGGTGATAGCAACAGCGTCTTTAAGGTCCGCTT GGTGAATGTGCGTCCTTTGGAGAGCGGCGAGGAGGTGGCCCAGGGAGTGC ACACCAGTGGAGGTGACTTCCAGCCGGCGTTGGAGCCCAGCACCTCCGCC CCGCCCAAGAAGTTCGAGGAGTTCGACGAGGAGGACGACGATGATCGCCG CGAGCCGCTGGAGAAGCAGCCACAGGATAACGAGGTGCGCGACATTGATG AGCCCAAGGTATAAACTTATTTACGACAAAGAAAAAACATATATCCTTTG AAAGACATTTAACCTGGAAATGCTTGGCAAGCGCTCTACTAACCAATAAA AAAAAAAAAACGAATTGTATATTGAGATCTTTCTATAACTTGTAATATAC CTATATACATATTTCTATTCTTTTTTTAAATAAAGTTTTCCATAAAACTA AAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 12405595..12406069 | 1199..725 | 2375 | 100 | Minus |
chr2L | 23010047 | chr2L | 12406149..12406336 | 728..541 | 940 | 100 | Minus |
chr2L | 23010047 | chr2L | 12420246..12420449 | 373..173 | 940 | 98.5 | Minus |
chr2L | 23010047 | chr2L | 12408061..12408231 | 541..371 | 855 | 100 | Minus |
chr2R | 21145070 | chr2R | 8577964..8578080 | 167..51 | 585 | 100 | Minus |
chr2R | 21145070 | chr2R | 8578136..8578186 | 51..1 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12406992..12407468 | 1201..725 | 2385 | 100 | Minus |
2L | 23513712 | 2L | 12421641..12421841 | 373..173 | 1005 | 100 | Minus |
2L | 23513712 | 2L | 12407548..12407735 | 728..541 | 940 | 100 | Minus |
2L | 23513712 | 2L | 12409456..12409626 | 541..371 | 855 | 100 | Minus |
2R | 25286936 | 2R | 12690701..12690817 | 167..51 | 585 | 100 | Minus |
2R | 25286936 | 2R | 12690873..12690923 | 51..1 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 12406992..12407468 | 1201..725 | 2385 | 100 | Minus |
2L | 23513712 | 2L | 12421641..12421841 | 373..173 | 1005 | 100 | Minus |
2L | 23513712 | 2L | 12407548..12407735 | 728..541 | 940 | 100 | Minus |
2L | 23513712 | 2L | 12409456..12409626 | 541..371 | 855 | 100 | Minus |
2R | 25260384 | 2R | 12691900..12692016 | 167..51 | 585 | 100 | Minus |
2R | 25260384 | 2R | 12692072..12692122 | 51..1 | 255 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 1..55 | 249..303 | 113 | 67.3 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 12405595..12406067 | 727..1199 | 100 | <- | Minus |
chr2L | 12406151..12406335 | 542..726 | 100 | <- | Minus |
chr2L | 12408061..12408228 | 374..541 | 100 | <- | Minus |
chr2L | 12420246..12420449 | 173..373 | 98 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 1..705 | 310..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 1..705 | 310..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 1..705 | 310..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 1..705 | 310..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 1..705 | 310..1014 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 1..1027 | 173..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 1..1027 | 173..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 22..1048 | 173..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 1..1027 | 173..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
vir-1-RC | 22..1048 | 173..1199 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12406994..12407466 | 727..1199 | 100 | <- | Minus |
2L | 12407550..12407734 | 542..726 | 100 | <- | Minus |
2L | 12409456..12409623 | 374..541 | 100 | <- | Minus |
2L | 12421641..12421841 | 173..373 | 100 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12406994..12407466 | 727..1199 | 100 | <- | Minus |
2L | 12407550..12407734 | 542..726 | 100 | <- | Minus |
2L | 12409456..12409623 | 374..541 | 100 | <- | Minus |
2L | 12421641..12421841 | 173..373 | 100 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12406994..12407466 | 727..1199 | 100 | <- | Minus |
2L | 12407550..12407734 | 542..726 | 100 | <- | Minus |
2L | 12409456..12409623 | 374..541 | 100 | <- | Minus |
2L | 12421641..12421841 | 173..373 | 100 | == | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 12421641..12421841 | 173..373 | 100 | == | Minus |
arm_2L | 12406994..12407466 | 727..1199 | 100 | <- | Minus |
arm_2L | 12407550..12407734 | 542..726 | 100 | <- | Minus |
arm_2L | 12409456..12409623 | 374..541 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 12406994..12407466 | 727..1199 | 100 | <- | Minus |
2L | 12407550..12407734 | 542..726 | 100 | <- | Minus |
2L | 12409456..12409623 | 374..541 | 100 | <- | Minus |
2L | 12421641..12421841 | 173..373 | 100 | == | Minus |
Translation from 309 to 1013
> GH02216.pep MKLLFGLLMTVLALSGVFTLPARNDPQDDAEVIKVPSRPQPESDFHNFRG VIDTGSGYPFLQPNPSSFNVGIFDSFDDLFRRLRTRLWPVIGRDSGEEGA SPTGDSDDSSDGSGAGFPFGVRPLIPLDSKNANTTSTIKVVNGHKVEINE TVYGDSNSVFKVRLVNVRPLESGEEVAQGVHTSGGDFQPALEPSTSAPPK KFEEFDEEDDDDRREPLEKQPQDNEVRDIDEPKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15675-PA | 239 | GF15675-PA | 1..239 | 1..234 | 852 | 71.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10265-PA | 227 | GG10265-PA | 1..226 | 1..230 | 883 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10136-PA | 228 | GH10136-PA | 1..228 | 1..234 | 684 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vir-1-PH | 234 | CG31764-PH | 1..234 | 1..234 | 1226 | 100 | Plus |
vir-1-PC | 234 | CG31764-PC | 1..234 | 1..234 | 1226 | 100 | Plus |
vir-1-PB | 431 | CG31764-PB | 1..233 | 1..233 | 1222 | 100 | Plus |
vir-1-PA | 431 | CG31764-PA | 1..233 | 1..233 | 1222 | 100 | Plus |
vir-1-PG | 423 | CG31764-PG | 1..225 | 1..225 | 1180 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22225-PA | 411 | GI22225-PA | 1..229 | 1..233 | 745 | 64 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19505-PA | 463 | GL19505-PA | 16..243 | 16..233 | 717 | 72.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16459-PA | 463 | GA16459-PA | 16..243 | 16..233 | 756 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26251-PA | 431 | GM26251-PA | 1..233 | 1..233 | 1202 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22123-PA | 440 | GD22123-PA | 1..233 | 1..233 | 1204 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ20102-PA | 231 | GJ20102-PA | 16..231 | 17..234 | 652 | 63.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14629-PA | 419 | GK14629-PA | 1..237 | 1..233 | 671 | 66.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE12315-PA | 430 | GE12315-PA | 1..233 | 1..233 | 951 | 91 | Plus |
Translation from 309 to 1013
> GH02216.hyp MKLLFGLLMTVLALSGVFTLPARNDPQDDAEVIKVPSRPQPESDFHNFRG VIDTGSGYPFLQPNPSSFNVGIFDSFDDLFRRLRTRLWPVIGRDSGEEGA SPTGDSDDSSDGSGAGFPFGVRPLIPLDSKNANTTSTIKVVNGHKVEINE TVYGDSNSVFKVRLVNVRPLESGEEVAQGVHTSGGDFQPALEPSTSAPPK KFEEFDEEDDDDRREPLEKQPQDNEVRDIDEPKV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
vir-1-PH | 234 | CG31764-PH | 1..234 | 1..234 | 1226 | 100 | Plus |
vir-1-PC | 234 | CG31764-PC | 1..234 | 1..234 | 1226 | 100 | Plus |
vir-1-PB | 431 | CG31764-PB | 1..233 | 1..233 | 1222 | 100 | Plus |
vir-1-PA | 431 | CG31764-PA | 1..233 | 1..233 | 1222 | 100 | Plus |
vir-1-PG | 423 | CG31764-PG | 1..225 | 1..225 | 1180 | 100 | Plus |