Clone GH02265 Report

Search the DGRC for GH02265

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:22
Well:65
Vector:pOT2
Associated Gene/TranscriptCG11317-RA
Protein status:GH02265.pep: gold
Preliminary Size:1966
Sequenced Size:1795

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG11317 2001-01-01 Release 2 assignment
CG11317 2001-09-19 Blastp of sequenced clone
CG11317 2003-01-01 Sim4 clustering to Release 3
CG11317 2008-04-29 Release 5.5 accounting
CG11317 2008-08-15 Release 5.9 accounting
CG11317 2008-12-18 5.12 accounting

Clone Sequence Records

GH02265.complete Sequence

1795 bp (1795 high quality bases) assembled on 2001-09-19

GenBank Submission: AY060230

> GH02265.complete
ACGATACGGTCGCCAGTTTTTCCGGGCTTTTCCGTCGCGTCCTCGCCTCA
TTTTCCGTAGCCCGCTTATCAGCGCAAGAACGCGTCGCGTGAAAATGCCG
TCGGTGAAAAGGCAGTTGGCATAATTCGTTGCCTACTTCAGGGCGCTGCA
GCATATCAACTGGATTTTTCCGACAGCCCATTAATCAGGATACCGCACTC
CTGCACTGCTGCACACCTGCAACCATGTTTTGGATTTTACGGCGCACCGG
TGCCGCCAACTTCTTCAACTCCTTCAACAACAACTGCAGCTTTTCCAAGA
GCAACTCAAACGGCGGTAATCACAACAACAGCACACAAGACAAATATGTG
AAGAGGCCCCCACGGAAGGCATATGGACGACTGAGTGCCGAGGCCGACGA
TGCCGTCTCACTTGGCCACAAAATCGATGATCCGTTCGATGAGCTAGACG
ACTTTGAAATGCTGGCAGCGAACTCCGCCACTGCCGGCTGTAGCAGTCAG
GTACCAGGAGAAGCCAATGGCAACGTCAATGTCAACGGGGGCTCGGGTTC
AGGCTTAGGATCCACAGGAGCGGCAGGCTGTGGGAACGGCAATGGGAACG
GTAACGGGAGTGGAAACGGGAACCTGTCACTCCTGCCCTGCATGGATGCC
GATTGCCAGGGCAACTACGAGGTGGAGAGCGCCCTCTGCGAGCTGGGATT
GTGCCAGGCGAAAGCCAAAACATCAAAGGACCTCGGCGCAGGCAGCACGT
CAACATCGAAGGAGATTAACGAAAACACAATAAGTCGTCTGCATGCGCTG
GCCATGGCGGATGACGATGATGACTACGACGAATCACTCACCTGCAACGT
GTGCGACCGAGCTTTCCATTGTCACCGCCAGTTGGCATCGCACCAGCAGA
AGAAGCGACACTTCGGTTGCAGTGGCTGCGATAGTTTGTTCCCGTCGCTA
ATGCTGCTGGAGCACCACAAGGAGGAATTTGAGCACTGGAGCGACGAGGA
GATTGGTCGCAGGGTCTGTTGTCGCCGGAACAGGTGCGACGACGATTATT
TCACGGACACCGACTCCTTTATCAGCGACGCGGAGAGCGAGGATCTGGAG
AGGCTGTTGTAAATACCGGACACCGGGCCGAGCCGAAGGATGGCAGTGAC
TGAAGGGAAGACGAGGGTGCAGGACTGGATTTGAATCAACCCAGCCGAAA
AGTAGCCAGCCGTCCATTCCCATTAATGCTGGGCGGAATATCCTGCGGCG
CCAAGTGAAAGGGATGAACTTGGGAGGACATCCAACTTGGAATTGGGCGC
TCATCTTTTGATGAAGATTGACACACGGGGCGGACCGCTTGTCACCCTAA
TGAAAATGAATTAAACCCCAATCCGGCCGAACGCAAAGCCGCAAGCCAAA
CAATGAAAACTGTTGGCCAGGACCCAATAGCAAAAACCAAAAAACCAAAA
AACCGATAAACAAAAACAAAAAGAGACGCCAGGACAAGATATAAAATACT
TGTGGACTGTGTGTTGTCTGTACTTTTAGAGTTCAACTACAAGAGACCCC
GCTGGGGGTCTAAAAACCAAGTTATAAATATAAATGTAAATGTATATCTA
TGTATGTGTGTGTATAATGAGCTAGTCGAATACGAAACTCCATAAATGGA
AATCATATCATTAACAACATATGTGTAAGCCCCAGGACAAATGCAAAACT
ATTTACCAAATGAAAAACCAAAGAAAAACCCAATGTATTTTTCAATAAAT
AAAACTGTGCGAAACCGAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH02265.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:24:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG11317.b 2118 CG11317.b 337..2105 1..1769 8845 100 Plus
CG11317-RA 1885 CG11317-RA 104..1872 1..1769 8845 100 Plus
CG11317.a 1817 CG11317.a 863..1804 828..1769 4710 100 Plus
CG11317.a 1817 CG11317.a 27..854 1..828 4140 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 22:01:36
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 26913099..26913950 1767..916 4260 100 Minus
chr3R 27901430 chr3R 26914442..26914932 828..338 2455 100 Minus
chr3R 27901430 chr3R 26919339..26919645 339..33 1505 99.3 Minus
chr3R 27901430 chr3R 26914073..26914161 916..828 445 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:27:34 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 22:01:34
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 31090710..31091563 1769..916 4270 100 Minus
3R 32079331 3R 31092055..31092545 828..338 2455 100 Minus
3R 32079331 3R 31096955..31097293 339..1 1695 100 Minus
3R 32079331 3R 31091686..31091774 916..828 445 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:47:22
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 30831541..30832394 1769..916 4270 100 Minus
3R 31820162 3R 30832886..30833376 828..338 2455 100 Minus
3R 31820162 3R 30837786..30838124 339..1 1695 100 Minus
3R 31820162 3R 30832517..30832605 916..828 445 100 Minus
Blast to na_te.dros performed 2019-03-15 22:01:35
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6719..6801 251..333 127 61.4 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6709..6780 262..333 126 63.9 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 6773..6849 257..333 115 61 Plus
Dvir\TART 8500 Dvir\TART TARTVIR 8500bp 2310..2410 245..340 114 62.7 Plus

GH02265.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 22:02:43 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 26913099..26913949 917..1767 100 <- Minus
chr3R 26914073..26914160 829..916 100 <- Minus
chr3R 26914442..26914930 340..828 100 <- Minus
chr3R 26919339..26919643 35..339 99 <- Minus
chr3R 26919656..26919690 1..34 97   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:07:04 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 1..888 225..1112 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:10:17 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 1..888 225..1112 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 06:06:04 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 1..888 225..1112 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:41:08 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 1..888 225..1112 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 01:09:47 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 1..888 225..1112 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:01:21 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 26..1792 1..1767 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:10:17 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 26..1792 1..1767 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 06:06:04 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 29..1795 1..1767 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:41:08 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 26..1792 1..1767 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 01:09:47 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
CG11317-RA 29..1795 1..1767 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:02:43 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31090712..31091562 917..1767 100 <- Minus
3R 31091686..31091773 829..916 100 <- Minus
3R 31092055..31092543 340..828 100 <- Minus
3R 31096955..31097293 1..339 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:02:43 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31090712..31091562 917..1767 100 <- Minus
3R 31091686..31091773 829..916 100 <- Minus
3R 31092055..31092543 340..828 100 <- Minus
3R 31096955..31097293 1..339 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 22:02:43 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
3R 31090712..31091562 917..1767 100 <- Minus
3R 31091686..31091773 829..916 100 <- Minus
3R 31092055..31092543 340..828 100 <- Minus
3R 31096955..31097293 1..339 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 06:06:04 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 26922677..26923015 1..339 100   Minus
arm_3R 26916434..26917284 917..1767 100 <- Minus
arm_3R 26917408..26917495 829..916 100 <- Minus
arm_3R 26917777..26918265 340..828 100 <- Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:18:45 Download gff for GH02265.complete
Subject Subject Range Query Range Percent Splice Strand
3R 30831543..30832393 917..1767 100 <- Minus
3R 30832517..30832604 829..916 100 <- Minus
3R 30832886..30833374 340..828 100 <- Minus
3R 30837786..30838124 1..339 100   Minus

GH02265.hyp Sequence

Translation from 224 to 1111

> GH02265.hyp
MFWILRRTGAANFFNSFNNNCSFSKSNSNGGNHNNSTQDKYVKRPPRKAY
GRLSAEADDAVSLGHKIDDPFDELDDFEMLAANSATAGCSSQVPGEANGN
VNVNGGSGSGLGSTGAAGCGNGNGNGNGSGNGNLSLLPCMDADCQGNYEV
ESALCELGLCQAKAKTSKDLGAGSTSTSKEINENTISRLHALAMADDDDD
YDESLTCNVCDRAFHCHRQLASHQQKKRHFGCSGCDSLFPSLMLLEHHKE
EFEHWSDEEIGRRVCCRRNRCDDDYFTDTDSFISDAESEDLERLL*

GH02265.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:25:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG11317-PA 295 CG11317-PA 1..295 1..295 1601 100 Plus
CG11317-PB 298 CG11317-PB 1..298 1..295 1587 99 Plus

GH02265.pep Sequence

Translation from 224 to 1111

> GH02265.pep
MFWILRRTGAANFFNSFNNNCSFSKSNSNGGNHNNSTQDKYVKRPPRKAY
GRLSAEADDAVSLGHKIDDPFDELDDFEMLAANSATAGCSSQVPGEANGN
VNVNGGSGSGLGSTGAAGCGNGNGNGNGSGNGNLSLLPCMDADCQGNYEV
ESALCELGLCQAKAKTSKDLGAGSTSTSKEINENTISRLHALAMADDDDD
YDESLTCNVCDRAFHCHRQLASHQQKKRHFGCSGCDSLFPSLMLLEHHKE
EFEHWSDEEIGRRVCCRRNRCDDDYFTDTDSFISDAESEDLERLL*

GH02265.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:34:59
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF16601-PA 288 GF16601-PA 1..288 1..295 1038 87.7 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:35:00
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG11891-PA 295 GG11891-PA 1..295 1..295 1130 95.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:35:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14345-PA 301 GH14345-PA 1..301 1..295 874 73.9 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:05:29
Subject Length Description Subject Range Query Range Score Percent Strand
CG11317-PA 295 CG11317-PA 1..295 1..295 1601 100 Plus
CG11317-PB 298 CG11317-PB 1..298 1..295 1587 99 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:35:02
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI10440-PA 291 GI10440-PA 1..291 1..295 998 75.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:35:03
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL13959-PA 291 GL13959-PA 1..291 1..295 991 82.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:35:04
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA10912-PA 290 GA10912-PA 1..290 1..295 992 82.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM12109-PA 295 GM12109-PA 1..295 1..295 1537 98.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:35:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16633-PA 295 GD16633-PA 1..295 1..295 1537 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:35:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ10657-PA 289 GJ10657-PA 1..289 1..295 989 75.1 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:35:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK22558-PA 299 GK22558-PA 1..299 1..295 906 77.3 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:35:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE23339-PA 293 GE23339-PA 1..293 1..295 1479 95.6 Plus