BDGP Sequence Production Resources |
Search the DGRC for GH02315
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 23 |
Well: | 15 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4872-RA |
Protein status: | GH02315.pep: gold |
Preliminary Size: | 1319 |
Sequenced Size: | 1279 |
Gene | Date | Evidence |
---|---|---|
CG4872 | 2001-01-01 | Release 2 assignment |
CG4872 | 2002-01-03 | Blastp of sequenced clone |
CG4872 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4872 | 2008-04-29 | Release 5.5 accounting |
CG4872 | 2008-08-15 | Release 5.9 accounting |
CG4872 | 2008-12-18 | 5.12 accounting |
1279 bp (1279 high quality bases) assembled on 2002-01-03
GenBank Submission: AY075313
> GH02315.complete TAAGATACTAAGTTGCATTCCAATTATAATTAGAATATTTTAATTTGCAA GAATTACTTTGTTTTAAAACCATTTCATTGCCAATATGAGCAGCTCTACG CCAGCTTACTACAATGCGGATGCTGTGCGTCAGGTTCTCACCTGGCCGCT GGTCAATAAGGCAGTGGAATCTGCACTTGTAGCTATAGTTAAGCAGAATC CGGAAACGCCCTCCACATCCTTTGCCTTTCAACCGAAGAGGACTTTTATT CCATGCGGCAAGGAACCTGGCAAGGTTCTGCTCACCATGCCCGCCTATGT GGGCAACTACAGGCTGGAATCGTCAAGGGATCCTGGGGAAGTGGAGCACA CCCACTCAACACTGGCCTGCAAGTTGGTGACCTCGTTCAGTGGGAATCCC CGACGGGATCCTCCGCTGCCCAGCATCCATGCCCATGTGCTGCTGTTCGA CAATCAAACCGGTCAACTGTCGGCCATAATGGAGGGCACGGACTTGACCA CCTGGCGCACTGTATCCGCTTCACTGGTGGCCACCAAGTATCTGTACTTC AGGCGCTTTGGGGCGCAGGCGGAGCAGGAAAGGAATATCAACGTGGCCAT CGTGGGCTGTGGAGTTCAAGGACAACTCCATGCTGCCGCTTTCTGCGCGA ACTTCCGGGTGAGGCAGCTTAATCTTTACAATCGCACGCAGGCAAAGGCA CTGGGTTTAGCGGACCAACTGCGGCAGAAATTGAACACCGAGAGCGGAAC CCAGATTACTGTATGTCCAAGTCCTCACGAAGCTTGCCAGGATGCCGATA TCATCTGCATCGCCACGTACTCCAAGGAGCCGCTTATCCAGTTGGCAGAT CTGAAATCCAAACGGGCTGTTCATATTAACGCTGTGGGAGCCGGCGAAGT TCACTTTTCGGAGGTGGCTCCAAAGATTTACCAGCAGGCCAAGGTCTACG TGGATTGCTATGCCAATGCCGAGGCTGAATTGGTGGGATTACCTGCGCCG ATCACCGCTGAAGTGGGTCAGATCATTCTGGATGGAAACTATCCCAAGGA GCTAGAAATCAGCATCTTTCAATCCATGGGCATGGCCTCGGAGGACGCCT GTGTGGCCCAGGCGGTTCAGGATTGCATTATCTCTAGCGCAAAGGATTCC TGATTGCTGTCCAGCTGGCAAAGCGATTCCGGAACCAGCCCAAGCCAAAC CAGTGAATTCTTAAACTTTAATGTGTATATGCGCGTATATAAAAAAGCAT TTGGAAACATAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4872-RA | 1311 | CG4872-RA | 44..1305 | 1..1262 | 6310 | 100 | Plus |
CG4872.a | 1244 | CG4872.a | 69..1238 | 93..1262 | 5850 | 100 | Plus |
CG9104-RA | 1783 | CG9104-RA | 1464..1647 | 1262..1079 | 920 | 100 | Minus |
CG9104-RA | 1783 | CG9104-RA | 1737..1783 | 1080..1034 | 235 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 16771000..16771875 | 1..879 | 4195 | 98.7 | Plus |
chrX | 22417052 | chrX | 16771947..16772146 | 881..1080 | 970 | 99 | Plus |
chrX | 22417052 | chrX | 16772236..16772417 | 1079..1260 | 895 | 99.5 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 16771000..16771877 | 1..881 | 98 | -> | Plus |
chrX | 16771948..16772145 | 882..1079 | 98 | -> | Plus |
chrX | 16772237..16772417 | 1080..1260 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 1..1068 | 86..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 1..1068 | 86..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 1..1068 | 86..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 1..1068 | 86..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 1..1068 | 86..1153 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 24..1283 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4872-RA | 24..1283 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16881370..16882250 | 1..881 | 100 | -> | Plus |
X | 16882321..16882518 | 882..1079 | 100 | -> | Plus |
X | 16882610..16882790 | 1080..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16881370..16882250 | 1..881 | 100 | -> | Plus |
X | 16882321..16882518 | 882..1079 | 100 | -> | Plus |
X | 16882610..16882790 | 1080..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16881370..16882250 | 1..881 | 100 | -> | Plus |
X | 16882321..16882518 | 882..1079 | 100 | -> | Plus |
X | 16882610..16882790 | 1080..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 16775403..16776283 | 1..881 | 100 | -> | Plus |
arm_X | 16776354..16776551 | 882..1079 | 100 | -> | Plus |
arm_X | 16776643..16776823 | 1080..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 16890419..16890616 | 882..1079 | 100 | -> | Plus |
X | 16890708..16890888 | 1080..1260 | 100 | Plus | |
X | 16889468..16890348 | 1..881 | 100 | -> | Plus |
Translation from 85 to 1152
> GH02315.pep MSSSTPAYYNADAVRQVLTWPLVNKAVESALVAIVKQNPETPSTSFAFQP KRTFIPCGKEPGKVLLTMPAYVGNYRLESSRDPGEVEHTHSTLACKLVTS FSGNPRRDPPLPSIHAHVLLFDNQTGQLSAIMEGTDLTTWRTVSASLVAT KYLYFRRFGAQAEQERNINVAIVGCGVQGQLHAAAFCANFRVRQLNLYNR TQAKALGLADQLRQKLNTESGTQITVCPSPHEACQDADIICIATYSKEPL IQLADLKSKRAVHINAVGAGEVHFSEVAPKIYQQAKVYVDCYANAEAELV GLPAPITAEVGQIILDGNYPKELEISIFQSMGMASEDACVAQAVQDCIIS SAKDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21752-PA | 344 | GF21752-PA | 1..341 | 1..354 | 1154 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19086-PA | 355 | GG19086-PA | 1..355 | 1..355 | 1643 | 83.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24738-PA | 369 | GH24738-PA | 1..369 | 1..353 | 1123 | 60.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4872-PA | 355 | CG4872-PA | 1..355 | 1..355 | 1829 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14778-PA | 361 | GI14778-PA | 1..361 | 1..353 | 1139 | 59.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22385-PA | 354 | GL22385-PA | 5..354 | 4..353 | 1184 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18493-PA | 354 | GA18493-PA | 5..354 | 4..353 | 1184 | 61.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13473-PA | 353 | GM13473-PA | 1..342 | 1..345 | 1584 | 86.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD17316-PA | 352 | GD17316-PA | 4..344 | 8..348 | 1644 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18824-PA | 168 | GJ18824-PA | 82..168 | 267..353 | 314 | 66.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17631-PA | 357 | GE17631-PA | 1..357 | 1..355 | 1573 | 81.8 | Plus |
Translation from 85 to 1152
> GH02315.hyp MSSSTPAYYNADAVRQVLTWPLVNKAVESALVAIVKQNPETPSTSFAFQP KRTFIPCGKEPGKVLLTMPAYVGNYRLESSRDPGEVEHTHSTLACKLVTS FSGNPRRDPPLPSIHAHVLLFDNQTGQLSAIMEGTDLTTWRTVSASLVAT KYLYFRRFGAQAEQERNINVAIVGCGVQGQLHAAAFCANFRVRQLNLYNR TQAKALGLADQLRQKLNTESGTQITVCPSPHEACQDADIICIATYSKEPL IQLADLKSKRAVHINAVGAGEVHFSEVAPKIYQQAKVYVDCYANAEAELV GLPAPITAEVGQIILDGNYPKELEISIFQSMGMASEDACVAQAVQDCIIS SAKDS*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4872-PA | 355 | CG4872-PA | 1..355 | 1..355 | 1829 | 100 | Plus |