Clone GH02384 Report

Search the DGRC for GH02384

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:23
Well:84
Vector:pOT2
Associated Gene/TranscriptCG31683-RA
Protein status:GH02384.pep: gold
Preliminary Size:1824
Sequenced Size:1820

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG31683 2000-02-14 Blastp of sequenced clone
CG18858 2001-01-01 Release 2 assignment
CG18858 2003-01-01 Sim4 clustering to Release 3
CG31683 2003-01-01 Sim4 clustering to Release 3
CG31683 2008-04-29 Release 5.5 accounting
CG18858 2008-04-29 Picked prior to 5.5
CG31683 2008-08-15 Release 5.9 accounting
CG31683 2008-12-18 5.12 accounting

Clone Sequence Records

GH02384.complete Sequence

1820 bp (1820 high quality bases) assembled on 2000-02-14

GenBank Submission: AF145599

> GH02384.complete
GGCTAAGAGGGGAGAAATAAACGCTGACCATAACAAACTGCGCAACAACA
ACAATACAGATTAGGCAGAAAACAACAAAATTGCAAAGCCAACGCTTTTG
TTAAAACAATAACAGCCACTCTTGACGTCGTTTTGCGCAGGGAAGTGCGA
CCGCCGAAGTTCCGCATACACACATACGCACACACACATAGTTTAAAGGT
CAAATCTCAGCTGACGGAAAGTGCGCAGACCACAAGGGCTCCATATAAAT
GCATTACAATTACCACAAAAGAAAGCTCGGCAGGCTGATTCACTTGTTTA
TGCGCAGGAGGCCTTTATCTGGCGTCAATTGAGTAGCGCGATCCGATAAC
CTGCGAGCTATATACTCCAAGTAGTCAGTCGCCACTCCTGCTTTGTTTAC
AACGCAACGCACAATGAGGCTCAAATCGGGAGTGCTTTCGCTGCTCCTGC
TGACCACCTTCTTGGCCCTGGGCGAGTGCTTTTGGCCATTTAGCAAATGG
CATGGAAGAAATGATAATCCTTCTGCCCCCCCTGAACCCAAGCTGTCGCC
AGTGATATTCGTACCCGGTGACGGAGGCTCCCAAATGGATGCTCGGCTAA
ATAAGCCCAACTCTCCCTATTTAATTTGCCAAAAGACCCACGATTGGTAC
AACCTGTGGCTGGATCTGGAGCAGTTGGTCATCCCCATTGTCTACTGTTG
GATAGACAATGTCAAGCTGTACTACGACAAGGTCACGAGGACCACCCACA
ACACTCCTGGTGTGGAGACGAGGATACCCGGCTGGGGCAATCCCGAGGTG
GTCGAGTGGATCGATCCCACCAAGAACAGCGCCGGAGCCTACTTCAAGGA
TATAGCCAATGAGCTGGTGAAACTTGGATATATTCGCAAACAAAATATTC
ATGGAGCACCCTATGACTTCCGCAAAGCGCCAAATGAGAACCAACAGTTC
TTCATCGATCTCAAGCAGCTGGTGGAGGACTCCTATGAGGCCAACAATCA
GTCGGCTGTGACCTTCATCTCGCACAGCATGGGCAGTCTCATGACCCTGG
TTTTCTTGCAGGAGCAAACCCTCCAATGGAAGGCGAAATACGTGAAGCGC
ATGATCAGCCTGGCGGGAGTTTGGGCGGGAAGTTTTAAGGCTGTGAAAGT
GTTTGCCATGGGCGATGATCTCGACTCGTTCGCCCTGAGTGCCAAGATCC
TCAAGGCGGAACAGATAACACACCCATCCACGGCCTGGTTGCTGCCCTCG
CCACTGTTTTGGAAGCCAACCGAGGTGCTCGCCATGACTCCAAGCAGAAA
CTATACGATGGCACAGCTGGAAGAGTTCTTCAAAGACCTCGACTACATGA
CGGGCTGGGAAATGCGCAAGGACACGATTCGGTACAACCGAAACTTCGAT
CCACCGAATGTGGAACTGCACTGTCTCTATGGCGAAGGCATCGACACGGT
CGAGAGACTGCAGTACAAGAAATCGGACATTAGTGGGGAAACGCCCAAGT
TGATAATGGGTCTCGGCGACGGCACCGTTAACCAGCGTTCTCTGCGAGCC
TGCAAATATTGGGCGGGCTATTCTAAAGCGCCTATAAACACGCTCGCTCT
CCAGAACGTGGACCACTTGCACATCCTGTCCAATCCGGACGTCCTCAAAT
ATATCCGCACTGTCATGCAGCAGCCGTAATGTCAATTGTAGCACTTAAGT
ATGCGAAGAGCTTCGTGATGCTCAAAATCTAAAGCTAATGACAATGCCAA
TTTTATTGTTAAATAAATGTAACTCGTTAAGTAGCGCAAGCGTAAAGAAC
AAAAAAAAAAAAAAAAAAAA

GH02384.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:41:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG31683-RA 2040 CG31683-RA 35..1834 3..1802 9000 100 Plus
CG31683.a 3128 CG31683.a 35..1834 3..1802 9000 100 Plus
CG18858-RA 2118 CG18858-RA 228..2027 3..1802 8970 99.8 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:32:29
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 20447816..20448374 561..3 2795 100 Minus
chr2L 23010047 chr2L 20456933..20457491 561..3 2795 100 Minus
chr2L 23010047 chr2L 20446786..20447308 1456..934 2615 100 Minus
chr2L 23010047 chr2L 20455903..20456429 1456..930 2605 99.6 Minus
chr2L 23010047 chr2L 20447372..20447749 938..561 1875 99.7 Minus
chr2L 23010047 chr2L 20456489..20456866 938..561 1860 99.5 Minus
chr2L 23010047 chr2L 20446377..20446722 1800..1455 1730 100 Minus
chr2L 23010047 chr2L 20455494..20455839 1800..1455 1730 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:27:43 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:32:27
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20449381..20449939 561..3 2795 100 Minus
2L 23513712 2L 20458498..20459056 561..3 2795 100 Minus
2L 23513712 2L 20448351..20448873 1456..934 2615 100 Minus
2L 23513712 2L 20457468..20457994 1456..930 2605 99.6 Minus
2L 23513712 2L 20448937..20449314 938..561 1875 99.7 Minus
2L 23513712 2L 20458054..20458431 938..561 1860 99.5 Minus
2L 23513712 2L 20447940..20448287 1802..1455 1740 100 Minus
2L 23513712 2L 20457057..20457404 1802..1455 1740 100 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 22:02:24
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 20458498..20459056 561..3 2795 100 Minus
2L 23513712 2L 20449381..20449939 561..3 2795 100 Minus
2L 23513712 2L 20448351..20448873 1456..934 2615 100 Minus
2L 23513712 2L 20457468..20457994 1456..930 2605 99.6 Minus
2L 23513712 2L 20448937..20449314 938..561 1875 99.7 Minus
2L 23513712 2L 20458054..20458431 938..561 1860 99.4 Minus
2L 23513712 2L 20457057..20457404 1802..1455 1740 100 Minus
2L 23513712 2L 20447940..20448287 1802..1455 1740 100 Minus
Blast to na_te.dros performed on 2019-03-15 12:32:28 has no hits.

GH02384.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:33:15 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 20446377..20446720 1457..1800 100 <- Minus
chr2L 20446786..20447308 934..1456 100 <- Minus
chr2L 20447377..20447748 562..933 100 <- Minus
chr2L 20447816..20448374 1..561 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:07:23 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 1..1266 414..1679 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:34:00 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 1..1266 414..1679 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:45:01 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 1..1266 414..1679 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 21:08:32 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 1..1266 414..1679 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:03:02 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 1..1266 414..1679 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:36:21 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 33..1832 1..1800 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:34:00 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 33..1832 1..1800 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:45:01 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 24..1823 1..1800 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 21:08:32 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 33..1832 1..1800 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:03:02 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
CG31683-RA 24..1823 1..1800 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:15 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20447942..20448285 1457..1800 100 <- Minus
2L 20448351..20448873 934..1456 100 <- Minus
2L 20448942..20449313 562..933 100 <- Minus
2L 20449381..20449939 1..561 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:15 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20447942..20448285 1457..1800 100 <- Minus
2L 20448351..20448873 934..1456 100 <- Minus
2L 20448942..20449313 562..933 100 <- Minus
2L 20449381..20449939 1..561 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:33:15 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20447942..20448285 1457..1800 100 <- Minus
2L 20448351..20448873 934..1456 100 <- Minus
2L 20448942..20449313 562..933 100 <- Minus
2L 20449381..20449939 1..561 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:45:01 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 20447942..20448285 1457..1800 100 <- Minus
arm_2L 20448351..20448873 934..1456 100 <- Minus
arm_2L 20448942..20449313 562..933 100 <- Minus
arm_2L 20449381..20449939 1..561 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:46:07 Download gff for GH02384.complete
Subject Subject Range Query Range Percent Splice Strand
2L 20447942..20448285 1457..1800 100 <- Minus
2L 20448351..20448873 934..1456 100 <- Minus
2L 20448942..20449313 562..933 100 <- Minus
2L 20449381..20449939 1..561 99   Minus

GH02384.pep Sequence

Translation from 413 to 1678

> GH02384.pep
MRLKSGVLSLLLLTTFLALGECFWPFSKWHGRNDNPSAPPEPKLSPVIFV
PGDGGSQMDARLNKPNSPYLICQKTHDWYNLWLDLEQLVIPIVYCWIDNV
KLYYDKVTRTTHNTPGVETRIPGWGNPEVVEWIDPTKNSAGAYFKDIANE
LVKLGYIRKQNIHGAPYDFRKAPNENQQFFIDLKQLVEDSYEANNQSAVT
FISHSMGSLMTLVFLQEQTLQWKAKYVKRMISLAGVWAGSFKAVKVFAMG
DDLDSFALSAKILKAEQITHPSTAWLLPSPLFWKPTEVLAMTPSRNYTMA
QLEEFFKDLDYMTGWEMRKDTIRYNRNFDPPNVELHCLYGEGIDTVERLQ
YKKSDISGETPKLIMGLGDGTVNQRSLRACKYWAGYSKAPINTLALQNVD
HLHILSNPDVLKYIRTVMQQP*

GH02384.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 15:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14774-PA 422 GF14774-PA 1..422 1..421 1868 82.9 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 15:39:25
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG21570-PA 421 GG21570-PA 21..421 21..421 2036 92.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 15:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11651-PA 421 GH11651-PA 7..421 5..421 1794 76.3 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:52:37
Subject Length Description Subject Range Query Range Score Percent Strand
CG31683-PB 421 CG31683-PB 1..421 1..421 2266 100 Plus
CG31683-PA 421 CG31683-PA 1..421 1..421 2266 100 Plus
CG18858-PB 421 CG18858-PB 1..421 1..421 2259 99.5 Plus
CG18858-PA 421 CG18858-PA 1..421 1..421 2259 99.5 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 15:39:26
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI17953-PA 421 GI17953-PA 1..421 1..421 1782 77.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 15:39:27
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL26411-PA 426 GL26411-PA 1..426 1..421 1848 80 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 15:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA15103-PA 426 GA15103-PA 1..426 1..421 1845 80 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 15:39:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM23325-PA 421 GM23325-PA 1..421 1..421 2235 97.6 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 15:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21702-PA 391 GD21702-PA 17..391 47..421 1971 96.8 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 15:39:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ17724-PA 423 GJ17724-PA 20..423 18..421 1791 80.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 15:39:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18118-PA 422 GK18118-PA 1..422 1..421 1689 73.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 15:39:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE12591-PA 421 GE12591-PA 1..421 1..421 2044 93.1 Plus

GH02384.hyp Sequence

Translation from 413 to 1678

> GH02384.hyp
MRLKSGVLSLLLLTTFLALGECFWPFSKWHGRNDNPSAPPEPKLSPVIFV
PGDGGSQMDARLNKPNSPYLICQKTHDWYNLWLDLEQLVIPIVYCWIDNV
KLYYDKVTRTTHNTPGVETRIPGWGNPEVVEWIDPTKNSAGAYFKDIANE
LVKLGYIRKQNIHGAPYDFRKAPNENQQFFIDLKQLVEDSYEANNQSAVT
FISHSMGSLMTLVFLQEQTLQWKAKYVKRMISLAGVWAGSFKAVKVFAMG
DDLDSFALSAKILKAEQITHPSTAWLLPSPLFWKPTEVLAMTPSRNYTMA
QLEEFFKDLDYMTGWEMRKDTIRYNRNFDPPNVELHCLYGEGIDTVERLQ
YKKSDISGETPKLIMGLGDGTVNQRSLRACKYWAGYSKAPINTLALQNVD
HLHILSNPDVLKYIRTVMQQP*

GH02384.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:26:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG31683-PB 421 CG31683-PB 1..421 1..421 2266 100 Plus
CG31683-PA 421 CG31683-PA 1..421 1..421 2266 100 Plus
CG18858-PB 421 CG18858-PB 1..421 1..421 2259 99.5 Plus
CG18858-PA 421 CG18858-PA 1..421 1..421 2259 99.5 Plus