BDGP Sequence Production Resources |
Search the DGRC for GH02396
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 23 |
Well: | 96 |
Vector: | pOT2 |
Associated Gene/Transcript | Uch-RA |
Protein status: | GH02396.pep: gold |
Preliminary Size: | 1022 |
Sequenced Size: | 1068 |
Gene | Date | Evidence |
---|---|---|
CG4265 | 2000-02-14 | Blastp of sequenced clone |
CG4265 | 2001-01-01 | Release 2 assignment |
CG4265 | 2003-01-01 | Sim4 clustering to Release 3 |
Uch | 2008-04-29 | Release 5.5 accounting |
Uch | 2008-08-15 | Release 5.9 accounting |
Uch | 2008-12-18 | 5.12 accounting |
1068 bp (1068 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145600
> GH02396.complete GGAAAAAAGTAAAGCTCGTCAAAAGTGCCGGTAATTGTGTGTAGAAATCC TTCATTTTCCTGTGAATTTTCAATCAGATCACTGCTAAAGCCAAATTCAA AAATATGTTAACCTGGACGCCACTTGAATCTAATCCCGAGGTTTTGACCA AGTACATACATAAACTGGGCGTGTCGCCAGCCTGGTCGGTAACTGACGTC ATTGGATTGGAAGATGACACCTTGGAATGGATTCCGCGTCCCGTAAAGGC GTTCATTTTGCTCTTCCCGTGCAGCGAAACCTATGAGAAGCACCGCGCCG AGGAGCACGATCGGATTAAGGAGGTGGAGGAGCAGCATCCCGAGGATCTC TTCTACATGCGCCAGTTCACCCACAACGCCTGTGGAACCGTCGCCCTGAT CCACAGCGTGGCCAACAACAAAGAAGTGGACATTGACCGCGGAGTACTGA AGGACTTCCTGGAGAAGACAGCTTCCTTGTCCCCGGAGGAACGCGGACGG GCCCTCGAAAAAGACGAGAAGTTCACCGCCGATCATGAGGCCTTGGCTCA AGAGGGCCAGACGAATGCCGCCAATCATGAGAAGGTGATCCACCACTTCA TCGCACTGGTGAACAAGGAGGGTACTCTGTACGAGCTGGATGGCCGCAAG TCCTTCCCGATCAAGCACGGACCGACTTCGGAGGAGACTTTTGTGAAGGA TGCGGCCAAGGTCTGCAAGGAGTTCATGGCTCGCGATCCCAACGAAGTGC GCTTCACCGTTTTGGCCTTGACCGCGGCACAACAATAGGGTGGAACTAAT CCCATAACTGAGAACCACCAAGATCCCGGATCTGCCAGACTATATATTTA TATATCCAACATATTTTAAACCAGGCTGCAAAGGCGAACGAAGCCCCGCC TTTCAGCCGGTCAATAGTTTACGCATATTTATTCCGCATTGAGCCAAAGC CGCATATGTATTGGGAACACCATGATTGTTATTAAAGAGTGCACTCTAGC TTGATGCTAAGCTTATTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uch-RA | 1276 | Uch-RA | 146..1166 | 2..1022 | 5105 | 100 | Plus |
Uch.e | 1188 | Uch.e | 307..1188 | 139..1020 | 4410 | 100 | Plus |
Uch.d | 1155 | Uch.d | 426..1155 | 291..1020 | 3650 | 100 | Plus |
Uch.d | 1155 | Uch.d | 146..425 | 2..281 | 1400 | 100 | Plus |
Uch.e | 1188 | Uch.e | 146..284 | 2..140 | 695 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 2212468..2213063 | 1020..425 | 2920 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 2213145..2213287 | 424..282 | 715 | 100 | Minus |
chr2L | 23010047 | chr2L | 2213346..2213488 | 281..139 | 715 | 100 | Minus |
chr2L | 23010047 | chr2L | 2213623..2213763 | 142..2 | 705 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2212736..2213333 | 1022..425 | 2990 | 100 | Minus |
2L | 23513712 | 2L | 2213415..2213557 | 424..282 | 715 | 100 | Minus |
2L | 23513712 | 2L | 2213616..2213758 | 281..139 | 715 | 100 | Minus |
2L | 23513712 | 2L | 2213894..2214034 | 142..2 | 705 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 2212736..2213333 | 1022..425 | 2990 | 100 | Minus |
2L | 23513712 | 2L | 2213415..2213557 | 424..282 | 715 | 100 | Minus |
2L | 23513712 | 2L | 2213616..2213758 | 281..139 | 715 | 100 | Minus |
2L | 23513712 | 2L | 2213894..2214034 | 142..2 | 705 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 2213145..2213287 | 282..424 | 100 | <- | Minus |
chr2L | 2213346..2213486 | 141..281 | 100 | <- | Minus |
chr2L | 2213625..2213763 | 1..140 | 99 | Minus | |
chr2L | 2212468..2213063 | 425..1020 | 99 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 1..684 | 105..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RB | 1..684 | 105..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 1..684 | 105..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 1..684 | 105..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 1..684 | 105..788 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 145..1164 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 145..1164 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 177..1196 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 145..1164 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Uch-RA | 177..1196 | 1..1020 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2212738..2213333 | 425..1020 | 100 | <- | Minus |
2L | 2213415..2213557 | 282..424 | 100 | <- | Minus |
2L | 2213616..2213756 | 141..281 | 100 | <- | Minus |
2L | 2213896..2214034 | 1..140 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2212738..2213333 | 425..1020 | 100 | <- | Minus |
2L | 2213415..2213557 | 282..424 | 100 | <- | Minus |
2L | 2213616..2213756 | 141..281 | 100 | <- | Minus |
2L | 2213896..2214034 | 1..140 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2212738..2213333 | 425..1020 | 100 | <- | Minus |
2L | 2213415..2213557 | 282..424 | 100 | <- | Minus |
2L | 2213616..2213756 | 141..281 | 100 | <- | Minus |
2L | 2213896..2214034 | 1..140 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 2212738..2213333 | 425..1020 | 100 | <- | Minus |
arm_2L | 2213415..2213557 | 282..424 | 100 | <- | Minus |
arm_2L | 2213616..2213756 | 141..281 | 100 | <- | Minus |
arm_2L | 2213896..2214034 | 1..140 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 2212738..2213333 | 425..1020 | 100 | <- | Minus |
2L | 2213415..2213557 | 282..424 | 100 | <- | Minus |
2L | 2213616..2213756 | 141..281 | 100 | <- | Minus |
2L | 2213896..2214034 | 1..140 | 99 | Minus |
Translation from 104 to 787
> GH02396.hyp MLTWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAF ILLFPCSETYEKHRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIH SVANNKEVDIDRGVLKDFLEKTASLSPEERGRALEKDEKFTADHEALAQE GQTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTSEETFVKDA AKVCKEFMARDPNEVRFTVLALTAAQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uch-PB | 227 | CG4265-PB | 1..227 | 1..227 | 1194 | 100 | Plus |
Uch-PA | 227 | CG4265-PA | 1..227 | 1..227 | 1194 | 100 | Plus |
Uch-PC | 224 | CG4265-PC | 1..224 | 1..227 | 1163 | 98.7 | Plus |
Uch-L5-PB | 324 | CG3431-PB | 8..227 | 4..227 | 182 | 26.4 | Plus |
Uch-L5-PA | 324 | CG3431-PA | 8..227 | 4..227 | 182 | 26.4 | Plus |
Translation from 104 to 787
> GH02396.pep MLTWTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAF ILLFPCSETYEKHRAEEHDRIKEVEEQHPEDLFYMRQFTHNACGTVALIH SVANNKEVDIDRGVLKDFLEKTASLSPEERGRALEKDEKFTADHEALAQE GQTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPTSEETFVKDA AKVCKEFMARDPNEVRFTVLALTAAQQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15299-PA | 227 | GF15299-PA | 1..226 | 1..226 | 1067 | 86.7 | Plus |
Dana\GF19511-PA | 413 | GF19511-PA | 26..246 | 3..227 | 200 | 28 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24548-PA | 227 | GG24548-PA | 1..227 | 1..227 | 1146 | 93 | Plus |
Dere\GG19562-PA | 335 | GG19562-PA | 18..236 | 4..227 | 188 | 29 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11470-PA | 229 | GH11470-PA | 1..228 | 1..226 | 890 | 73.7 | Plus |
Dgri\GH22997-PA | 462 | GH22997-PA | 30..258 | 4..222 | 148 | 26.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Uch-PB | 227 | CG4265-PB | 1..227 | 1..227 | 1194 | 100 | Plus |
Uch-PA | 227 | CG4265-PA | 1..227 | 1..227 | 1194 | 100 | Plus |
Uch-PC | 224 | CG4265-PC | 1..224 | 1..227 | 1163 | 98.7 | Plus |
Uch-L5-PB | 324 | CG3431-PB | 8..227 | 4..227 | 182 | 26.4 | Plus |
Uch-L5-PA | 324 | CG3431-PA | 8..227 | 4..227 | 182 | 26.4 | Plus |
Uch-L5R-PA | 340 | CG1950-PA | 25..243 | 4..227 | 174 | 27.7 | Plus |
calypso-PA | 471 | CG8445-PA | 46..274 | 4..222 | 152 | 24.8 | Plus |
calypso-PB | 471 | CG8445-PB | 46..274 | 4..222 | 152 | 24.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16929-PA | 229 | GI16929-PA | 1..229 | 1..227 | 924 | 72.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL19416-PA | 227 | GL19416-PA | 1..226 | 1..226 | 1064 | 87.2 | Plus |
Dper\GL20225-PA | 351 | GL20225-PA | 24..253 | 2..227 | 155 | 24.9 | Plus |
Dper\GL10684-PA | 475 | GL10684-PA | 45..273 | 4..222 | 145 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18067-PA | 227 | GA18067-PA | 1..226 | 1..226 | 1061 | 86.7 | Plus |
Dpse\GA26899-PA | 351 | GA26899-PA | 24..253 | 2..227 | 156 | 24.9 | Plus |
Dpse\GA21084-PA | 475 | GA21084-PA | 45..273 | 4..222 | 145 | 25.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18256-PA | 227 | GM18256-PA | 1..227 | 1..227 | 1154 | 93.8 | Plus |
Dsec\GM23432-PA | 175 | GM23432-PA | 1..174 | 1..172 | 749 | 83.3 | Plus |
Dsec\GM13220-PA | 340 | GM13220-PA | 24..243 | 3..227 | 226 | 30.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22865-PA | 227 | GD22865-PA | 1..227 | 1..227 | 1160 | 94.3 | Plus |
Dsim\GD15942-PA | 426 | GD15942-PA | 110..329 | 3..227 | 201 | 28.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17211-PA | 229 | GJ17211-PA | 1..229 | 1..227 | 936 | 75.5 | Plus |