BDGP Sequence Production Resources |
Search the DGRC for GH02439
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 24 |
Well: | 39 |
Vector: | pOT2 |
Associated Gene/Transcript | CG2082-RG |
Protein status: | GH02439.pep: gold |
Preliminary Size: | 1862 |
Sequenced Size: | 1897 |
Gene | Date | Evidence |
---|---|---|
CG2082 | 2000-02-14 | Blastp of sequenced clone |
CG2082 | 2008-04-29 | Release 5.5 accounting |
CG2082 | 2008-08-15 | Release 5.9 accounting |
CG2082 | 2008-12-18 | 5.12 accounting |
1897 bp (1897 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145604
> GH02439.complete GCGTTCGAAGATTGCGCATTCGTTCAGAAACGCGGTTCCGCCCGATTCGC ATCCGATTTCGGTTTCCATCCTCGAGTGCTGCTGTGCGCCTGATAGAGCC CCGTTCGAGCCACGCTTGTGTGTCCCGCAGTTCCTTTGAGCAACCCAGTG AAGTGAAGCTACCGTCGCCCGAATCCCACACCATGTCGAAGCCGGGAACC CCCAAGCACGGCGCCGGCTCATCCTCAGCAGCTGCTGCCCCCGAGAAGAT TAGCAAATACAATATCAGCACAGAGAAATGCGGGGATCTGACGGTCATAG TGCAGGGCGACCTGTCACAGCAGGAGAAACGCGCCGTGTTCATAACGGTT CACGACCTGGGCTGCAACCACAACTCATTCCAGGAGTTCGTGAGCAGTCC CTGCATGACGGAGATCAAGGAGCGCTCCTGCTTCATCCACGTGGACGTGC CGGGGCACGCGGACAACGCGGAGGCCCTGGCTGACGGCTTTCCGTTTCCC TCGCTCCAGTCCCTGGGCGAGGACCTGGTCACCGTGCTGGACTACCTGCA CGTAAAGTACGTGATCGGCCTAGGCGAGGGTGCCGGAGCCAATGTCCTGG CCCGCTTCGGACTGGCCCATCCCAGCCGGGTGCTGGGCCTCATCCTGATC AACGCGACTGGCAGCGCCGCCAGTGTAGTGCAGTCCTTCAAGAACAAGTT CATTAGCTGGAAGAGCGACGAGGTGGCCCAGTCGGCTGAGAGCTTTCTGA TGTACCACAAATTCGGACATGTTATGGAGCAAATCGTGGGCGAGAATCCG GACAAGGAGAAGATCGTGGCCGAGTACCAGAAGCGTCTTCACCGATCCCT AAACAGCAAGAACATCGGTCTCTATGTCAAAGCATTTATGAATCGCAAGG ACCTTACGCTCAAGGGCTGCAAGGTAGATGTCATCCTGATCACGGGCATG CTCAGCCCCTATGCGTCCATGGTCGAGAAGCTCCATCGCGACGTGGAGAA GGAGAGGGTCACCATTCTGAAGATCGAGCGGGCTGGCGATGTCCTCGCCG ATGCTCCCGGAAAGGTGGCCCAATCCATTCTGCTGTTCTGCAAGGGACAG GGGCTGCTCACGTCGGTGGTGATGCCAGGCGTGGATCGCGGACGCGCCTT CTCCACGGCTAGCTCCGGATCGCTGGAGGGGGCCAACGGATCGCGGCGCC TGTCGCGCGGCATCTCGATGGAGGATTATGACAAGCCCAACATCCGCCGG CTCAGCATCATGAACAGTGAGTTGCCCAAGAAGGAGTAAATTAGACGAGA CCACGCCACGCCCACGTTGGTAGATTAAGCTTGATTGCGTATTTAAACTA CTTAAACTGGTAAAATACCTTTAGTCTGAGCAAAACGTATATGTGTGAAC CCAGAGCCAAACAATCATCCCAAGTGTAACCGCTTTTCCGCGGATTTTAG GCCAAATTCTAATTAGTAATCGCTTAAAGTTTTTAAAGAGTAGCAAACCC AACAACAACACATTGACCATCCGAATCCGAATGGACGGAAATAAGCCGAA AACTGTATTTACACTGTGTACTTAGGATTAGTCTTATGTATGTAACCCCA AGAAGCCCACCTAAGAATCTGAAACAATGTTCAAACATCCATATCTAAAT CTTCAACTCGACCGAACTTATCACAACTGCTAAACACGAACTATAAAACG CAATCTATTTAATACCTCCGAATAGTAAACTGTACCTAAACACGTAGAAA CTAGAATGGAAAAATCCCAAATGTTACTCCTCTACTCTGTCACCCTTCAA CTTTCTAAACTTTCTATAGTGAACAGTCTCAAATGTTGCTATTTTAGTAA ATAAAAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2082.c | 2160 | CG2082.c | 1..1871 | 1..1871 | 9325 | 99.8 | Plus |
CG2082-RG | 1858 | CG2082-RG | 2..1858 | 1..1857 | 9285 | 100 | Plus |
CG2082.b | 2163 | CG2082.b | 783..1874 | 780..1871 | 5430 | 99.8 | Plus |
CG2082.b | 2163 | CG2082.b | 13..782 | 1..770 | 3850 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1585217..1586018 | 1857..1056 | 4010 | 100 | Minus |
chr3R | 27901430 | chr3R | 1587819..1588147 | 698..370 | 1645 | 100 | Minus |
chr3R | 27901430 | chr3R | 1597277..1597530 | 254..1 | 1270 | 100 | Minus |
chr3R | 27901430 | chr3R | 1586277..1586439 | 1055..893 | 815 | 100 | Minus |
chr3R | 27901430 | chr3R | 1586496..1586610 | 892..778 | 575 | 100 | Minus |
chr3R | 27901430 | chr3R | 1587291..1587366 | 772..697 | 380 | 100 | Minus |
chr3R | 27901430 | chr3R | 1588204..1588269 | 369..304 | 330 | 100 | Minus |
chr3R | 27901430 | chr3R | 1588351..1588402 | 306..255 | 260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5759556..5760371 | 1871..1056 | 4050 | 99.8 | Minus |
3R | 32079331 | 3R | 5762172..5762500 | 698..370 | 1645 | 100 | Minus |
3R | 32079331 | 3R | 5771630..5771883 | 254..1 | 1270 | 100 | Minus |
3R | 32079331 | 3R | 5760630..5760792 | 1055..893 | 815 | 100 | Minus |
3R | 32079331 | 3R | 5760849..5760963 | 892..778 | 575 | 100 | Minus |
3R | 32079331 | 3R | 5761644..5761719 | 772..697 | 380 | 100 | Minus |
3R | 32079331 | 3R | 5762557..5762622 | 369..304 | 330 | 100 | Minus |
3R | 32079331 | 3R | 5762704..5762755 | 306..255 | 260 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5500387..5501202 | 1871..1056 | 4050 | 99.7 | Minus |
3R | 31820162 | 3R | 5503003..5503331 | 698..370 | 1645 | 100 | Minus |
3R | 31820162 | 3R | 5512461..5512714 | 254..1 | 1270 | 100 | Minus |
3R | 31820162 | 3R | 5501461..5501623 | 1055..893 | 815 | 100 | Minus |
3R | 31820162 | 3R | 5501680..5501794 | 892..778 | 575 | 100 | Minus |
3R | 31820162 | 3R | 5502475..5502550 | 772..697 | 380 | 100 | Minus |
3R | 31820162 | 3R | 5503388..5503453 | 369..304 | 330 | 100 | Minus |
3R | 31820162 | 3R | 5503535..5503586 | 306..255 | 260 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1588352..1588402 | 255..305 | 100 | <- | Minus |
chr3R | 1586277..1586439 | 893..1055 | 100 | <- | Minus |
chr3R | 1586496..1586608 | 780..892 | 100 | <- | Minus |
chr3R | 1587283..1587364 | 699..779 | 95 | <- | Minus |
chr3R | 1587819..1588147 | 370..698 | 100 | <- | Minus |
chr3R | 1588204..1588267 | 306..369 | 100 | <- | Minus |
chr3R | 1585217..1586018 | 1056..1857 | 100 | <- | Minus |
chr3R | 1597277..1597530 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RB | 55..1095 | 248..1289 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RG | 1..1107 | 183..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RG | 1..1107 | 183..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RB | 55..1095 | 248..1289 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RG | 1..1107 | 183..1289 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RB | 374..1982 | 248..1857 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RG | 1..1857 | 1..1857 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RG | 16..1872 | 1..1857 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RB | 374..1982 | 248..1857 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2082-RG | 16..1872 | 1..1857 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5762557..5762620 | 306..369 | 100 | <- | Minus |
3R | 5762705..5762755 | 255..305 | 100 | <- | Minus |
3R | 5761636..5761717 | 699..779 | 95 | <- | Minus |
3R | 5762172..5762500 | 370..698 | 100 | <- | Minus |
3R | 5759570..5760371 | 1056..1857 | 100 | <- | Minus |
3R | 5760630..5760792 | 893..1055 | 100 | <- | Minus |
3R | 5760849..5760961 | 780..892 | 100 | <- | Minus |
3R | 5771630..5771883 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5762557..5762620 | 306..369 | 100 | <- | Minus |
3R | 5762705..5762755 | 255..305 | 100 | <- | Minus |
3R | 5761636..5761717 | 699..779 | 95 | <- | Minus |
3R | 5762172..5762500 | 370..698 | 100 | <- | Minus |
3R | 5759570..5760371 | 1056..1857 | 100 | <- | Minus |
3R | 5760630..5760792 | 893..1055 | 100 | <- | Minus |
3R | 5760849..5760961 | 780..892 | 100 | <- | Minus |
3R | 5771630..5771883 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5762557..5762620 | 306..369 | 100 | <- | Minus |
3R | 5762705..5762755 | 255..305 | 100 | <- | Minus |
3R | 5761636..5761717 | 699..779 | 95 | <- | Minus |
3R | 5762172..5762500 | 370..698 | 100 | <- | Minus |
3R | 5759570..5760371 | 1056..1857 | 100 | <- | Minus |
3R | 5760630..5760792 | 893..1055 | 100 | <- | Minus |
3R | 5760849..5760961 | 780..892 | 100 | <- | Minus |
3R | 5771630..5771883 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1588427..1588477 | 255..305 | 100 | <- | Minus |
arm_3R | 1585292..1586093 | 1056..1857 | 100 | <- | Minus |
arm_3R | 1586352..1586514 | 893..1055 | 100 | <- | Minus |
arm_3R | 1586571..1586683 | 780..892 | 100 | <- | Minus |
arm_3R | 1587358..1587439 | 699..779 | 95 | <- | Minus |
arm_3R | 1587894..1588222 | 370..698 | 100 | <- | Minus |
arm_3R | 1588279..1588342 | 306..369 | 100 | <- | Minus |
arm_3R | 1597352..1597605 | 1..254 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5500401..5501202 | 1056..1857 | 100 | <- | Minus |
3R | 5501461..5501623 | 893..1055 | 100 | <- | Minus |
3R | 5501680..5501792 | 780..892 | 100 | <- | Minus |
3R | 5502467..5502548 | 699..779 | 95 | <- | Minus |
3R | 5503003..5503331 | 370..698 | 100 | <- | Minus |
3R | 5503388..5503451 | 306..369 | 100 | <- | Minus |
3R | 5503536..5503586 | 255..305 | 100 | <- | Minus |
3R | 5512461..5512714 | 1..254 | 100 | Minus |
Translation from 2 to 1161
> GH02439.hyp VRRLRIRSETRFRPIRIRFRFPSSSAAVRLIEPRSSHACVSRSSFEQPSE VKLPSPESHTMSKPGTPKHGAGSSSAAAAPEKISKYNISTEKCGDLTVIV QGDLSQQEKRAVFITVHDLGCNHNSFQEFVSSPCMTEIKERSCFIHVDVP GHADNAEALADGFPFPSLQSLGEDLVTVLDYLHVKYVIGLGEGAGANVLA RFGLAHPSRVLGLILINATGSAASVVQSFKNKFISWKSDEVAQSAESFLM YHKFGHVSSANRGRESGQGEDRGRVPEASSPIPKQQEHRSLCQSIYESQG PYAQGLQGRCHPDHGHAQPLCVHGREAPSRRGEGEGHHSEDRAGWRCPRR CSRKGGPIHSAVLQGTGAAHVGGDARRGSRTRLLHG*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2082-PG | 368 | CG2082-PG | 1..197 | 61..257 | 1019 | 100 | Plus |
CG2082-PD | 201 | CG2082-PD | 1..196 | 61..256 | 1015 | 100 | Plus |
CG2082-PA | 365 | CG2082-PA | 1..196 | 61..256 | 1015 | 100 | Plus |
CG2082-PM | 211 | CG2082-PM | 30..211 | 85..266 | 910 | 96.7 | Plus |
CG2082-PN | 197 | CG2082-PN | 21..192 | 85..256 | 894 | 100 | Plus |
Translation from 182 to 1288
> GH02439.pep MSKPGTPKHGAGSSSAAAAPEKISKYNISTEKCGDLTVIVQGDLSQQEKR AVFITVHDLGCNHNSFQEFVSSPCMTEIKERSCFIHVDVPGHADNAEALA DGFPFPSLQSLGEDLVTVLDYLHVKYVIGLGEGAGANVLARFGLAHPSRV LGLILINATGSAASVVQSFKNKFISWKSDEVAQSAESFLMYHKFGHVMEQ IVGENPDKEKIVAEYQKRLHRSLNSKNIGLYVKAFMNRKDLTLKGCKVDV ILITGMLSPYASMVEKLHRDVEKERVTILKIERAGDVLADAPGKVAQSIL LFCKGQGLLTSVVMPGVDRGRAFSTASSGSLEGANGSRRLSRGISMEDYD KPNIRRLSIMNSELPKKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18647-PA | 370 | GF18647-PA | 1..370 | 1..368 | 1915 | 97 | Plus |
Dana\GF12819-PA | 448 | GF12819-PA | 127..419 | 21..307 | 400 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10854-PA | 367 | GG10854-PA | 1..367 | 1..368 | 1923 | 98.4 | Plus |
Dere\GG22116-PA | 570 | GG22116-PA | 128..442 | 21..328 | 412 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19438-PA | 362 | GH19438-PA | 1..362 | 1..368 | 1770 | 90.2 | Plus |
Dgri\GH21835-PA | 450 | GH21835-PA | 129..421 | 21..307 | 400 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG2082-PG | 368 | CG2082-PG | 1..368 | 1..368 | 1874 | 100 | Plus |
CG2082-PA | 365 | CG2082-PA | 1..365 | 1..368 | 1846 | 99.2 | Plus |
CG2082-PK | 364 | CG2082-PK | 21..364 | 25..368 | 1753 | 100 | Plus |
CG2082-PB | 364 | CG2082-PB | 21..364 | 25..368 | 1753 | 100 | Plus |
CG2082-PJ | 361 | CG2082-PJ | 21..361 | 25..368 | 1725 | 99.1 | Plus |
CG2082-PC | 361 | CG2082-PC | 21..361 | 25..368 | 1725 | 99.1 | Plus |
CG2082-PL | 363 | CG2082-PL | 21..363 | 25..368 | 1723 | 99.1 | Plus |
CG2082-PH | 363 | CG2082-PH | 21..363 | 25..368 | 1723 | 99.1 | Plus |
CG2082-PO | 335 | CG2082-PO | 1..286 | 75..363 | 1425 | 98.3 | Plus |
CG2082-PD | 201 | CG2082-PD | 1..196 | 1..196 | 1015 | 100 | Plus |
CG2082-PM | 211 | CG2082-PM | 30..204 | 25..199 | 908 | 100 | Plus |
CG2082-PN | 197 | CG2082-PN | 21..192 | 25..196 | 894 | 100 | Plus |
MESK2-PJ | 468 | CG15669-PJ | 27..341 | 21..328 | 386 | 32.3 | Plus |
MESK2-PI | 485 | CG15669-PI | 44..358 | 21..328 | 386 | 32.3 | Plus |
MESK2-PD | 365 | CG15669-PD | 44..361 | 21..332 | 384 | 31.4 | Plus |
MESK2-PE | 447 | CG15669-PE | 126..443 | 21..332 | 384 | 31.4 | Plus |
MESK2-PF | 447 | CG15669-PF | 126..443 | 21..332 | 384 | 31.4 | Plus |
MESK2-PA | 447 | CG15669-PA | 126..443 | 21..332 | 384 | 31.4 | Plus |
MESK2-PB | 425 | CG15669-PB | 126..421 | 21..310 | 379 | 32.4 | Plus |
MESK2-PK | 409 | CG15669-PK | 98..390 | 21..307 | 378 | 32.7 | Plus |
MESK2-PC | 437 | CG15669-PC | 126..418 | 21..307 | 378 | 32.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22641-PA | 361 | GI22641-PA | 1..361 | 1..368 | 1739 | 89.1 | Plus |
Dmoj\GI19078-PA | 549 | GI19078-PA | 129..443 | 21..328 | 412 | 31.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23012-PA | 368 | GL23012-PA | 1..368 | 1..368 | 1900 | 96.2 | Plus |
Dper\GL16980-PA | 563 | GL16980-PA | 139..453 | 21..328 | 414 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15229-PA | 368 | GA15229-PA | 1..368 | 1..368 | 1868 | 95.9 | Plus |
Dpse\GA15229-PB | 365 | GA15229-PB | 1..365 | 1..368 | 1835 | 95.1 | Plus |
Dpse\GA25012-PD | 470 | GA25012-PD | 44..358 | 21..328 | 415 | 31.5 | Plus |
Dpse\GA25012-PE | 453 | GA25012-PE | 27..341 | 21..328 | 414 | 31.5 | Plus |
Dpse\GA25012-PG | 365 | GA25012-PG | 44..336 | 21..307 | 404 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10591-PA | 383 | GM10591-PA | 16..383 | 1..368 | 1954 | 99.7 | Plus |
Dsec\GM15838-PA | 447 | GM15838-PA | 126..418 | 21..307 | 401 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19583-PA | 368 | GD19583-PA | 1..368 | 1..368 | 1960 | 100 | Plus |
Dsim\GD11599-PA | 536 | GD11599-PA | 126..440 | 21..328 | 411 | 31.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23888-PA | 360 | GJ23888-PA | 1..360 | 1..368 | 1796 | 92.4 | Plus |
Dvir\GJ20053-PA | 553 | GJ20053-PA | 131..445 | 21..328 | 403 | 31.2 | Plus |