BDGP Sequence Production Resources |
Search the DGRC for GH02536
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 25 |
Well: | 36 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8230-RA |
Protein status: | GH02536.pep: gold |
Preliminary Size: | 2800 |
Sequenced Size: | 2856 |
Gene | Date | Evidence |
---|---|---|
CG8230 | 2000-02-14 | Blastp of sequenced clone |
CG8230 | 2001-01-01 | Release 2 assignment |
CG8230 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8230 | 2008-04-29 | Release 5.5 accounting |
CG8230 | 2008-08-15 | Release 5.9 accounting |
CG8230 | 2008-12-18 | 5.12 accounting |
2856 bp (2856 high quality bases) assembled on 2000-02-14
GenBank Submission: AF132149
> GH02536.complete GGGTAAGCACCTCACCCCCCCGCTCAATGATCAAGTGACGTGCCACCAAT ATAACCATTGGCCGGCCAACAGCACTCTTTCGACTGCGGAATGGGCATCA ACGTCAGCAGGACGGCCGACCTGGGGTCCAACCAGTGGCTCCAGCGCTTC GTGGGCCGCCAGCACATCGCCCACGATGACGAGGCCTTCTGGAACGGGCT GCTCAACTACAACATTGTGCTGCCGGAGAACAGTCAGGACCAGCTCAACC TGGACAGCCGGCTAGAGGCGCTGTGCCAGTCGTTCATCGGCAATAACCTG AAGACGGGCAACTTTGGCTCCCTGGTGACCGTGTTCCTGGAGAAGACCAG CGAGCTGCTGTCGCTGTCGGACCAGGAAAGCAACATGCACGTCTGGCAGA CCTTCAACGCGCTCTTCATCATCCGCAGCCTGGTCAAGTACATCAACGAG ACGGGCTCTGAGTTCCAGCTGCTGCAGCACTTTGAGGCTATGCCGAATGC AGAGCTGCTGCAAGCGGCATTGGAGCAGCAGCAACAGACGCCGGCGGAGA GCGCCACCATTGCCATGGAGGCCACCGAACAGTCGGCGGCGGCTGCGGTT CCAGTGATTGTGGACGGATCTAAGTTTGAGACCTTCATCGATGCCCTGGT GAACCTAATCGTCGTGATTCCCGTCAAGGAGTTCACCTACCACCTGCACC TAGAGGCCGTTAACATGCTGATCACCCTGCTGTCAGTGCATCTGTTTGCC CAACAGCCCACGGACAAGTCCATCGTGTTCCGGACGGTCTTCAAGTGTCA GCACGCAAACGTGCTGATGTCGGCACTGCTGCATTTTGTGGCGCGTATTG TGGAGGTGCCGCACACCATGTTTGGGTCCAGCTCTGCTGGATCCTTTGTC TTTGGCATCGCGGAGTCGCTGCTTTCCATCTTCACGTTCCGTAAGCAGCC AGACATACTGAAAGCGGGCCAAGCAGCCGGCGGTGGAGAGCTCTCGCAGC GATTCCGTACCCACTACCCACTGGCCAACCAGAGCCTGTTGCTGATCCTG ATACTGACTAACCACTGCACGGCACAGGATAACGCCTATCGGACTAGCCT TTTCAGTTGCGCCGATTCAAAGGATTCACCAAAACAGGGAGCTGTCTCCT TCCAGATCGACTTCTCGGCGGTATATGAGACATTGTGTACCATCGTTACC ATCGACCAGGCCACGCTGCTGCTCTATCTGCTGCTCCATCGCAACGAGCG CTTCTACCGGTTCGTCATGCAGCAACAGGACTTGGAGCAGTTGGTGATCC CCATCCTCCAGACACTGTACAACGCCCCCGATAGCAACTCACATCACATC TACATGTCCTTGATCGTGCTGCTGATCCTGAGTGAAGACGAGGGCTTCAA CAAGAATGTGCACACCATAATGCTAAAAAACATCACATGGTATACGGAAC GCACCATATCGGAGATATCGCTGGGCGGCATCCTAATCCTTATCGTCATC CGCACCATACAGTACAACATGCTGAAGATGCGCGACAAGTACTTGCACAC CAATTGCCTGGCGGCGCTGGCCAACATGTCCGGCCACTTCCGCGCTCTAC ACCCTTACGTGGCACAGCGACTGGTCTCGCTGTTCGAAACGCTCGCTCGG AAGCATACGCGCCTGGATGCGCAGCTCAAGGAGCCGGCCGATAGCGCAGT GTTTGTGAACGTCTCGACGACCCCGGAAGACATGCTACAAGATCTGAGCG TGCTGGAGGAGGTGTTGCGCATGGTGCTGGAAATCCTAAACTCCTGCCTC ACAAACCAGTTGGTCTACTGTCCCAACTTGGTGTACACTCTTTTGTACAA GCGCAGCGTCTTCGAGGGCTTCCGCAGTCACCACGCCTTCCAGGATGTCA TCCAAAACATAGACATGGTTGTCGGTTTCTTCTCCTCGCGTCTGCAGCGT GTCCAGGAGCAGAGAGGCGAGCTTGGGGTCAATGAAGTGCTCGAGGTTAT ATCTAAAGGTGCCAGTCAGTGGTCCAGCGATCGACTGAGAAAGTTCCCGG ATCTTAAGTTTAAGTACGTCGAGGAGGACGCTCCCGAGGAGTTCTTCATT CCATATGTGTGGACGTTGGTCTGCAAGTACGGCTGCGTGCACTTCAGCTC GGAGAGCATCAAGAGCGTGACCACGGACATAGCCTGCTAATATTTACTGC TCTATCCCTTCCTCTCACGCACACACCCGGCTCCGCTTTGGTTTCCACCA TGTTTCGATGCTTCTCCGTTTGTCTTCTGTGCGGGATTACCCGATCTTTA AGCCATATACCACGCCCTACCTTTTGATCCAACCCAAAATGTCGAAATGC AGTATCAAAAACAAAACAAAGCAAGAGAAATGTTGCGCTAAATAAGAGGC ATGCGCATCTCGAACGTTGACGACAAGAGGAGACAAAGCAAACGAGAGAA CTAACGATAATACATAGACATAGCTACGCTTATACTAATGTGTATGTTAA CAAGCAATCCGGTCGGAAATTGTTGTTCAAGTTAAAATATAGCAACCTTG AAACATGATCATATTTTGCCAAGCCGACTGCAATGAGCATGTTTAGAGGG AAGTTAAGCTCCGTACGCCTACAGATCGATGTTCTAATCAATGGGAAGCA GCAAATCCAATAAAAAGTATATATACATATTAAAGAATCGGAATATACAA TATATGCAAAATATATTTACATTTTAGTCTATGGTAATTATATATTGTAT TGTATTTAGCAATTGAAAACGTCGATAAACTATATATTAACTAAAGTTAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 4833438..4834626 | 1419..231 | 5945 | 100 | Minus |
chr2R | 21145070 | chr2R | 4831872..4832629 | 2798..2041 | 3760 | 99.7 | Minus |
chr2R | 21145070 | chr2R | 4832882..4833381 | 1919..1420 | 2500 | 100 | Minus |
chr2R | 21145070 | chr2R | 4834703..4834935 | 233..1 | 1150 | 99.6 | Minus |
chr2R | 21145070 | chr2R | 4832702..4832825 | 2040..1917 | 620 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 8945864..8947052 | 1419..231 | 5945 | 100 | Minus |
2R | 25286936 | 2R | 8944296..8945055 | 2800..2041 | 3800 | 100 | Minus |
2R | 25286936 | 2R | 8945308..8945807 | 1919..1420 | 2500 | 100 | Minus |
2R | 25286936 | 2R | 8947129..8947361 | 233..1 | 1165 | 100 | Minus |
2R | 25286936 | 2R | 8945128..8945251 | 2040..1917 | 620 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 8947063..8948251 | 1419..231 | 5945 | 100 | Minus |
2R | 25260384 | 2R | 8945495..8946254 | 2800..2041 | 3800 | 100 | Minus |
2R | 25260384 | 2R | 8946507..8947006 | 1919..1420 | 2500 | 100 | Minus |
2R | 25260384 | 2R | 8948328..8948560 | 233..1 | 1165 | 100 | Minus |
2R | 25260384 | 2R | 8946327..8946450 | 2040..1917 | 620 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
ZAM | 8435 | ZAM DMZAM 8435bp Derived from AJ000387 (e1237231) ((Rel. 54, Last updated, Version 1). | 6950..6998 | 2758..2710 | 128 | 73.5 | Minus |
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 4417..4497 | 2786..2705 | 128 | 63.4 | Minus |
Max-element | 8556 | Max-element DME487856 8556bp Derived from AJ487856 (Rel. 71, Last updated, Version 1). | 694..796 | 2756..2660 | 123 | 62.5 | Minus |
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6773..6870 | 466..565 | 116 | 60 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 4831872..4832629 | 2041..2798 | 99 | <- | Minus |
chr2R | 4832702..4832824 | 1918..2040 | 100 | <- | Minus |
chr2R | 4832884..4833381 | 1420..1917 | 100 | <- | Minus |
chr2R | 4833438..4834623 | 234..1419 | 100 | <- | Minus |
chr2R | 4834703..4834935 | 1..233 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2100 | 91..2190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2100 | 91..2190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2100 | 91..2190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2100 | 91..2190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2100 | 91..2190 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2798 | 1..2798 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2798 | 1..2798 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2781 | 18..2798 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2798 | 1..2798 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8230-RA | 1..2781 | 18..2798 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8944298..8945055 | 2041..2798 | 100 | <- | Minus |
2R | 8945128..8945250 | 1918..2040 | 100 | <- | Minus |
2R | 8945310..8945807 | 1420..1917 | 100 | <- | Minus |
2R | 8945864..8947049 | 234..1419 | 100 | <- | Minus |
2R | 8947129..8947361 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8944298..8945055 | 2041..2798 | 100 | <- | Minus |
2R | 8945128..8945250 | 1918..2040 | 100 | <- | Minus |
2R | 8945310..8945807 | 1420..1917 | 100 | <- | Minus |
2R | 8945864..8947049 | 234..1419 | 100 | <- | Minus |
2R | 8947129..8947361 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8944298..8945055 | 2041..2798 | 100 | <- | Minus |
2R | 8945128..8945250 | 1918..2040 | 100 | <- | Minus |
2R | 8945310..8945807 | 1420..1917 | 100 | <- | Minus |
2R | 8945864..8947049 | 234..1419 | 100 | <- | Minus |
2R | 8947129..8947361 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 4831803..4832560 | 2041..2798 | 100 | <- | Minus |
arm_2R | 4832633..4832755 | 1918..2040 | 100 | <- | Minus |
arm_2R | 4832815..4833312 | 1420..1917 | 100 | <- | Minus |
arm_2R | 4833369..4834554 | 234..1419 | 100 | <- | Minus |
arm_2R | 4834634..4834866 | 1..233 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 8945497..8946254 | 2041..2798 | 100 | <- | Minus |
2R | 8946327..8946449 | 1918..2040 | 100 | <- | Minus |
2R | 8946509..8947006 | 1420..1917 | 100 | <- | Minus |
2R | 8947063..8948248 | 234..1419 | 100 | <- | Minus |
2R | 8948328..8948560 | 1..233 | 100 | Minus |
Translation from 90 to 2189
> GH02536.hyp MGINVSRTADLGSNQWLQRFVGRQHIAHDDEAFWNGLLNYNIVLPENSQD QLNLDSRLEALCQSFIGNNLKTGNFGSLVTVFLEKTSELLSLSDQESNMH VWQTFNALFIIRSLVKYINETGSEFQLLQHFEAMPNAELLQAALEQQQQT PAESATIAMEATEQSAAAAVPVIVDGSKFETFIDALVNLIVVIPVKEFTY HLHLEAVNMLITLLSVHLFAQQPTDKSIVFRTVFKCQHANVLMSALLHFV ARIVEVPHTMFGSSSAGSFVFGIAESLLSIFTFRKQPDILKAGQAAGGGE LSQRFRTHYPLANQSLLLILILTNHCTAQDNAYRTSLFSCADSKDSPKQG AVSFQIDFSAVYETLCTIVTIDQATLLLYLLLHRNERFYRFVMQQQDLEQ LVIPILQTLYNAPDSNSHHIYMSLIVLLILSEDEGFNKNVHTIMLKNITW YTERTISEISLGGILILIVIRTIQYNMLKMRDKYLHTNCLAALANMSGHF RALHPYVAQRLVSLFETLARKHTRLDAQLKEPADSAVFVNVSTTPEDMLQ DLSVLEEVLRMVLEILNSCLTNQLVYCPNLVYTLLYKRSVFEGFRSHHAF QDVIQNIDMVVGFFSSRLQRVQEQRGELGVNEVLEVISKGASQWSSDRLR KFPDLKFKYVEEDAPEEFFIPYVWTLVCKYGCVHFSSESIKSVTTDIAC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8230-PA | 699 | CG8230-PA | 1..699 | 1..699 | 3561 | 100 | Plus |
Translation from 90 to 2189
> GH02536.pep MGINVSRTADLGSNQWLQRFVGRQHIAHDDEAFWNGLLNYNIVLPENSQD QLNLDSRLEALCQSFIGNNLKTGNFGSLVTVFLEKTSELLSLSDQESNMH VWQTFNALFIIRSLVKYINETGSEFQLLQHFEAMPNAELLQAALEQQQQT PAESATIAMEATEQSAAAAVPVIVDGSKFETFIDALVNLIVVIPVKEFTY HLHLEAVNMLITLLSVHLFAQQPTDKSIVFRTVFKCQHANVLMSALLHFV ARIVEVPHTMFGSSSAGSFVFGIAESLLSIFTFRKQPDILKAGQAAGGGE LSQRFRTHYPLANQSLLLILILTNHCTAQDNAYRTSLFSCADSKDSPKQG AVSFQIDFSAVYETLCTIVTIDQATLLLYLLLHRNERFYRFVMQQQDLEQ LVIPILQTLYNAPDSNSHHIYMSLIVLLILSEDEGFNKNVHTIMLKNITW YTERTISEISLGGILILIVIRTIQYNMLKMRDKYLHTNCLAALANMSGHF RALHPYVAQRLVSLFETLARKHTRLDAQLKEPADSAVFVNVSTTPEDMLQ DLSVLEEVLRMVLEILNSCLTNQLVYCPNLVYTLLYKRSVFEGFRSHHAF QDVIQNIDMVVGFFSSRLQRVQEQRGELGVNEVLEVISKGASQWSSDRLR KFPDLKFKYVEEDAPEEFFIPYVWTLVCKYGCVHFSSESIKSVTTDIAC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12727-PA | 700 | GF12727-PA | 1..700 | 1..699 | 3478 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10604-PA | 699 | GG10604-PA | 1..699 | 1..699 | 3727 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20269-PA | 710 | GH20269-PA | 1..710 | 1..699 | 3360 | 90 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8230-PA | 699 | CG8230-PA | 1..699 | 1..699 | 3561 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19438-PA | 695 | GI19438-PA | 1..695 | 1..699 | 3390 | 92 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11092-PA | 654 | GL11092-PA | 3..654 | 49..699 | 3200 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20914-PA | 700 | GA20914-PA | 1..700 | 1..699 | 3452 | 94.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20649-PA | 699 | GM20649-PA | 1..699 | 1..699 | 3723 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD10123-PA | 699 | GD10123-PA | 1..699 | 1..699 | 3717 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21190-PA | 701 | GJ21190-PA | 1..701 | 1..699 | 3331 | 91.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17820-PA | 729 | GK17820-PA | 1..729 | 1..699 | 3208 | 85.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22694-PA | 699 | GE22694-PA | 1..699 | 1..699 | 3701 | 98.6 | Plus |