BDGP Sequence Production Resources |
Search the DGRC for GH02581
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 25 |
Well: | 81 |
Vector: | pOT2 |
Associated Gene/Transcript | arg-RA |
Protein status: | GH02581.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1278 |
Gene | Date | Evidence |
---|---|---|
CG18104 | 2001-01-01 | Release 2 assignment |
CG18104 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18104 | 2003-02-17 | Blastp of sequenced clone |
arg | 2008-04-29 | Release 5.5 accounting |
arg | 2008-08-15 | Release 5.9 accounting |
arg | 2008-12-18 | 5.12 accounting |
1278 bp (1278 high quality bases) assembled on 2003-02-17
GenBank Submission: BT004504
> GH02581.complete GTCGTTGTTGTCTCATTCATTCCCGGCCTCGCAGTCGTGGATTTTACAGC ATTGCGAGCAGATCCAATCTAAGAGATCCTAGATCACATGCAAAATGTGG TGGAGCCGTAAATTTGCCTCAAGGTCTCTCCGCCTCCACCGGCTCAAGAG CACCGGAAGCACTGCGCCCAGGGAACCTGAGCAATCTCTAGGCATCATTG GAGTGCCCTTCGCAAAGGGGCAGGCCAAGCAGGGCGTGGAACTGGCGCCA GATCTTCTCCGGCAGAGCAGTCTGCGTCAGGTGCTTCAGAGCAGTCATGA TGGCCTGGTGATACGGGACTACGGAAATCTGCAGTACGCCGTAGACGAGC CCCTTCTCCAGCAGCAGCGTGTGCACTATCACCACATCCGAAACTACGCG GACTTCATGGCCTGCAATCGGGCACTGATTGAACAGGTGAAACTCATGCT CGTGGAGAACACGCAGTTTTTAGCCATTGGTGGTGATCATGCGATCGGCT TCGGATCCGTGGCCGGGCACCTGCAACACACGCCGAATTTGTCCCTGGTG TGGATCGACGCACATGCGGACATCAATCTGCATAGCACCTCGCAGTCGGG CAACATCCATGGGATGCCTGTATCCTTTCTGTTGGAACAGCTCCGTAACA CCTGGCAGCACGCTGGCCTCCAGGAAATCGCGCCCAACTGCTTGCCCAAG GATCAGCTGGTTTACATCGGACTCCGGGACATTGACCCCTACGAGGCGTT CATCCTAAACAAAGTCGGAATACGCTACTATGCAATGGATACCATCGACC GGGTGGGCGTGCCCAAGATTATCGAGATGACGCTGGACGCCCTTAATCCG CAGAACAAGATCCACGTCAGCTTTGACATCGACGCCTTGGACAGCAATGT GGCGCCTAGCACTGGCACCGCGGTGCGCGGTGGCCTCACGCTCCGCGAGG GAATCAGCATCGTGGAGGCACTCCGGGACACCAAGCGGGTGCAGGGCGTC GATCTGGTGGAGATCAACCCAAAGCTAGGCAGCGAGCGCGACGTGCGCAC CACTGTGGAGTCCGGCCTGGAGATACTGAAGAGCATGTTCGGTTACCGGC GTTCGGGGCGCTGGAGCAACATCGATACCGGAATCCTTGGTAGCGATTAA AGAATGCAACACCCCCAGTTTTGAACTTATTCATATTTATGTACAGCATT CGTGACATATTAGTGTGTGTTTTTTTTTCGTATCTTAATGAGAGAATACA ATATTTGCGTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 421597..422066 | 791..1260 | 2350 | 100 | Plus |
chrX | 22417052 | chrX | 403453..403751 | 1..299 | 1465 | 99.3 | Plus |
chrX | 22417052 | chrX | 403944..404149 | 299..504 | 1030 | 100 | Plus |
chrX | 22417052 | chrX | 404209..404396 | 503..690 | 940 | 100 | Plus |
chrX | 22417052 | chrX | 420539..420639 | 690..790 | 505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 527559..528034 | 791..1266 | 2380 | 100 | Plus |
X | 23542271 | X | 509418..509716 | 1..299 | 1495 | 100 | Plus |
X | 23542271 | X | 509909..510114 | 299..504 | 1030 | 100 | Plus |
X | 23542271 | X | 510174..510361 | 503..690 | 940 | 100 | Plus |
X | 23542271 | X | 526501..526601 | 690..790 | 505 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 535657..536132 | 791..1266 | 2380 | 100 | Plus |
X | 23527363 | X | 517516..517814 | 1..299 | 1495 | 100 | Plus |
X | 23527363 | X | 518007..518212 | 299..504 | 1030 | 100 | Plus |
X | 23527363 | X | 518272..518459 | 503..690 | 940 | 100 | Plus |
X | 23527363 | X | 534599..534699 | 690..790 | 505 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 403453..403751 | 1..299 | 99 | -> | Plus |
chrX | 403945..404148 | 300..503 | 100 | -> | Plus |
chrX | 404210..404396 | 504..690 | 100 | -> | Plus |
chrX | 420540..420639 | 691..790 | 100 | -> | Plus |
chrX | 421597..422066 | 791..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1056 | 95..1150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1056 | 95..1150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1056 | 95..1150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1056 | 95..1150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1056 | 95..1150 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1260 | 1..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arg-RA | 1..1243 | 18..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 509418..509716 | 1..299 | 100 | -> | Plus |
X | 509910..510113 | 300..503 | 100 | -> | Plus |
X | 510175..510361 | 504..690 | 100 | -> | Plus |
X | 526502..526601 | 691..790 | 100 | -> | Plus |
X | 527559..528028 | 791..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 509418..509716 | 1..299 | 100 | -> | Plus |
X | 509910..510113 | 300..503 | 100 | -> | Plus |
X | 510175..510361 | 504..690 | 100 | -> | Plus |
X | 526502..526601 | 691..790 | 100 | -> | Plus |
X | 527559..528028 | 791..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 509418..509716 | 1..299 | 100 | -> | Plus |
X | 509910..510113 | 300..503 | 100 | -> | Plus |
X | 510175..510361 | 504..690 | 100 | -> | Plus |
X | 526502..526601 | 691..790 | 100 | -> | Plus |
X | 527559..528028 | 791..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 404208..404394 | 504..690 | 100 | -> | Plus |
arm_X | 420535..420634 | 691..790 | 100 | -> | Plus |
arm_X | 403451..403749 | 1..299 | 100 | -> | Plus |
arm_X | 403943..404146 | 300..503 | 100 | -> | Plus |
arm_X | 421592..422061 | 791..1260 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 517516..517814 | 1..299 | 100 | -> | Plus |
X | 518008..518211 | 300..503 | 100 | -> | Plus |
X | 518273..518459 | 504..690 | 100 | -> | Plus |
X | 534600..534699 | 691..790 | 100 | -> | Plus |
X | 535657..536126 | 791..1260 | 100 | Plus |
Translation from 94 to 1149
> GH02581.hyp MWWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVPFAKGQAKQGVEL APDLLRQSSLRQVLQSSHDGLVIRDYGNLQYAVDEPLLQQQRVHYHHIRN YADFMACNRALIEQVKLMLVENTQFLAIGGDHAIGFGSVAGHLQHTPNLS LVWIDAHADINLHSTSQSGNIHGMPVSFLLEQLRNTWQHAGLQEIAPNCL PKDQLVYIGLRDIDPYEAFILNKVGIRYYAMDTIDRVGVPKIIEMTLDAL NPQNKIHVSFDIDALDSNVAPSTGTAVRGGLTLREGISIVEALRDTKRVQ GVDLVEINPKLGSERDVRTTVESGLEILKSMFGYRRSGRWSNIDTGILGS D*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
arg-PA | 351 | CG18104-PA | 1..351 | 1..351 | 1814 | 100 | Plus |
Translation from 94 to 1149
> GH02581.pep MWWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVPFAKGQAKQGVEL APDLLRQSSLRQVLQSSHDGLVIRDYGNLQYAVDEPLLQQQRVHYHHIRN YADFMACNRALIEQVKLMLVENTQFLAIGGDHAIGFGSVAGHLQHTPNLS LVWIDAHADINLHSTSQSGNIHGMPVSFLLEQLRNTWQHAGLQEIAPNCL PKDQLVYIGLRDIDPYEAFILNKVGIRYYAMDTIDRVGVPKIIEMTLDAL NPQNKIHVSFDIDALDSNVAPSTGTAVRGGLTLREGISIVEALRDTKRVQ GVDLVEINPKLGSERDVRTTVESGLEILKSMFGYRRSGRWSNIDTGILGS D*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21939-PA | 347 | GF21939-PA | 1..347 | 1..351 | 1753 | 94.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12792-PA | 351 | GG12792-PA | 1..351 | 1..351 | 1847 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12104-PA | 354 | GH12104-PA | 1..353 | 1..351 | 1523 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
arg-PA | 351 | CG18104-PA | 1..351 | 1..351 | 1814 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15160-PA | 350 | GI15160-PA | 1..349 | 1..351 | 1489 | 80.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20388-PA | 356 | GL20388-PA | 1..356 | 1..351 | 1647 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14794-PA | 356 | GA14794-PA | 1..356 | 1..351 | 1651 | 90.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM19073-PA | 351 | GM19073-PA | 1..351 | 1..351 | 1829 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16510-PA | 351 | GD16510-PA | 1..351 | 1..351 | 1832 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14863-PA | 193 | GJ14863-PA | 1..192 | 1..198 | 790 | 77.8 | Plus |
Dvir\GJ14864-PA | 124 | GJ14864-PA | 1..121 | 231..349 | 565 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK16510-PA | 349 | GK16510-PA | 1..349 | 1..351 | 1633 | 88 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16619-PA | 363 | GE16619-PA | 1..363 | 1..351 | 1817 | 94.8 | Plus |