Clone GH02581 Report

Search the DGRC for GH02581

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:25
Well:81
Vector:pOT2
Associated Gene/Transcriptarg-RA
Protein status:GH02581.pep: gold
Preliminary Size:1300
Sequenced Size:1278

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG18104 2001-01-01 Release 2 assignment
CG18104 2003-01-01 Sim4 clustering to Release 3
CG18104 2003-02-17 Blastp of sequenced clone
arg 2008-04-29 Release 5.5 accounting
arg 2008-08-15 Release 5.9 accounting
arg 2008-12-18 5.12 accounting

Clone Sequence Records

GH02581.complete Sequence

1278 bp (1278 high quality bases) assembled on 2003-02-17

GenBank Submission: BT004504

> GH02581.complete
GTCGTTGTTGTCTCATTCATTCCCGGCCTCGCAGTCGTGGATTTTACAGC
ATTGCGAGCAGATCCAATCTAAGAGATCCTAGATCACATGCAAAATGTGG
TGGAGCCGTAAATTTGCCTCAAGGTCTCTCCGCCTCCACCGGCTCAAGAG
CACCGGAAGCACTGCGCCCAGGGAACCTGAGCAATCTCTAGGCATCATTG
GAGTGCCCTTCGCAAAGGGGCAGGCCAAGCAGGGCGTGGAACTGGCGCCA
GATCTTCTCCGGCAGAGCAGTCTGCGTCAGGTGCTTCAGAGCAGTCATGA
TGGCCTGGTGATACGGGACTACGGAAATCTGCAGTACGCCGTAGACGAGC
CCCTTCTCCAGCAGCAGCGTGTGCACTATCACCACATCCGAAACTACGCG
GACTTCATGGCCTGCAATCGGGCACTGATTGAACAGGTGAAACTCATGCT
CGTGGAGAACACGCAGTTTTTAGCCATTGGTGGTGATCATGCGATCGGCT
TCGGATCCGTGGCCGGGCACCTGCAACACACGCCGAATTTGTCCCTGGTG
TGGATCGACGCACATGCGGACATCAATCTGCATAGCACCTCGCAGTCGGG
CAACATCCATGGGATGCCTGTATCCTTTCTGTTGGAACAGCTCCGTAACA
CCTGGCAGCACGCTGGCCTCCAGGAAATCGCGCCCAACTGCTTGCCCAAG
GATCAGCTGGTTTACATCGGACTCCGGGACATTGACCCCTACGAGGCGTT
CATCCTAAACAAAGTCGGAATACGCTACTATGCAATGGATACCATCGACC
GGGTGGGCGTGCCCAAGATTATCGAGATGACGCTGGACGCCCTTAATCCG
CAGAACAAGATCCACGTCAGCTTTGACATCGACGCCTTGGACAGCAATGT
GGCGCCTAGCACTGGCACCGCGGTGCGCGGTGGCCTCACGCTCCGCGAGG
GAATCAGCATCGTGGAGGCACTCCGGGACACCAAGCGGGTGCAGGGCGTC
GATCTGGTGGAGATCAACCCAAAGCTAGGCAGCGAGCGCGACGTGCGCAC
CACTGTGGAGTCCGGCCTGGAGATACTGAAGAGCATGTTCGGTTACCGGC
GTTCGGGGCGCTGGAGCAACATCGATACCGGAATCCTTGGTAGCGATTAA
AGAATGCAACACCCCCAGTTTTGAACTTATTCATATTTATGTACAGCATT
CGTGACATATTAGTGTGTGTTTTTTTTTCGTATCTTAATGAGAGAATACA
ATATTTGCGTAAAAAAAAAAAAAAAAAA

GH02581.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 18:20:31
Subject Length Description Subject Range Query Range Score Percent Strand
arg-RA 1380 arg-RA 111..1376 1..1266 6330 100 Plus
CG4293-RC 1835 CG4293-RC 1694..1835 1266..1125 710 100 Minus
CG4293-RA 1847 CG4293-RA 1706..1847 1266..1125 710 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:02:41
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 421597..422066 791..1260 2350 100 Plus
chrX 22417052 chrX 403453..403751 1..299 1465 99.3 Plus
chrX 22417052 chrX 403944..404149 299..504 1030 100 Plus
chrX 22417052 chrX 404209..404396 503..690 940 100 Plus
chrX 22417052 chrX 420539..420639 690..790 505 100 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:28:08 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:02:39
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 527559..528034 791..1266 2380 100 Plus
X 23542271 X 509418..509716 1..299 1495 100 Plus
X 23542271 X 509909..510114 299..504 1030 100 Plus
X 23542271 X 510174..510361 503..690 940 100 Plus
X 23542271 X 526501..526601 690..790 505 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:59:15
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 535657..536132 791..1266 2380 100 Plus
X 23527363 X 517516..517814 1..299 1495 100 Plus
X 23527363 X 518007..518212 299..504 1030 100 Plus
X 23527363 X 518272..518459 503..690 940 100 Plus
X 23527363 X 534599..534699 690..790 505 100 Plus
Blast to na_te.dros performed on 2019-03-16 08:02:39 has no hits.

GH02581.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:03:47 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 403453..403751 1..299 99 -> Plus
chrX 403945..404148 300..503 100 -> Plus
chrX 404210..404396 504..690 100 -> Plus
chrX 420540..420639 691..790 100 -> Plus
chrX 421597..422066 791..1260 100   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2010-07-28 16:35:17 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1056 95..1150 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:50:37 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1056 95..1150 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 07:50:23 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1056 95..1150 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 17:41:48 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1056 95..1150 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 06:47:30 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1056 95..1150 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-28 16:35:17 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1260 1..1260 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:50:37 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1260 1..1260 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 07:50:23 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1260 1..1260 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 17:41:48 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1260 1..1260 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 06:47:30 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arg-RA 1..1243 18..1260 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:03:47 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
X 509418..509716 1..299 100 -> Plus
X 509910..510113 300..503 100 -> Plus
X 510175..510361 504..690 100 -> Plus
X 526502..526601 691..790 100 -> Plus
X 527559..528028 791..1260 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:03:47 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
X 509418..509716 1..299 100 -> Plus
X 509910..510113 300..503 100 -> Plus
X 510175..510361 504..690 100 -> Plus
X 526502..526601 691..790 100 -> Plus
X 527559..528028 791..1260 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:03:47 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
X 509418..509716 1..299 100 -> Plus
X 509910..510113 300..503 100 -> Plus
X 510175..510361 504..690 100 -> Plus
X 526502..526601 691..790 100 -> Plus
X 527559..528028 791..1260 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 07:50:23 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 404208..404394 504..690 100 -> Plus
arm_X 420535..420634 691..790 100 -> Plus
arm_X 403451..403749 1..299 100 -> Plus
arm_X 403943..404146 300..503 100 -> Plus
arm_X 421592..422061 791..1260 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 14:12:26 Download gff for GH02581.complete
Subject Subject Range Query Range Percent Splice Strand
X 517516..517814 1..299 100 -> Plus
X 518008..518211 300..503 100 -> Plus
X 518273..518459 504..690 100 -> Plus
X 534600..534699 691..790 100 -> Plus
X 535657..536126 791..1260 100   Plus

GH02581.hyp Sequence

Translation from 94 to 1149

> GH02581.hyp
MWWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVPFAKGQAKQGVEL
APDLLRQSSLRQVLQSSHDGLVIRDYGNLQYAVDEPLLQQQRVHYHHIRN
YADFMACNRALIEQVKLMLVENTQFLAIGGDHAIGFGSVAGHLQHTPNLS
LVWIDAHADINLHSTSQSGNIHGMPVSFLLEQLRNTWQHAGLQEIAPNCL
PKDQLVYIGLRDIDPYEAFILNKVGIRYYAMDTIDRVGVPKIIEMTLDAL
NPQNKIHVSFDIDALDSNVAPSTGTAVRGGLTLREGISIVEALRDTKRVQ
GVDLVEINPKLGSERDVRTTVESGLEILKSMFGYRRSGRWSNIDTGILGS
D*

GH02581.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:28:15
Subject Length Description Subject Range Query Range Score Percent Strand
arg-PA 351 CG18104-PA 1..351 1..351 1814 100 Plus

GH02581.pep Sequence

Translation from 94 to 1149

> GH02581.pep
MWWSRKFASRSLRLHRLKSTGSTAPREPEQSLGIIGVPFAKGQAKQGVEL
APDLLRQSSLRQVLQSSHDGLVIRDYGNLQYAVDEPLLQQQRVHYHHIRN
YADFMACNRALIEQVKLMLVENTQFLAIGGDHAIGFGSVAGHLQHTPNLS
LVWIDAHADINLHSTSQSGNIHGMPVSFLLEQLRNTWQHAGLQEIAPNCL
PKDQLVYIGLRDIDPYEAFILNKVGIRYYAMDTIDRVGVPKIIEMTLDAL
NPQNKIHVSFDIDALDSNVAPSTGTAVRGGLTLREGISIVEALRDTKRVQ
GVDLVEINPKLGSERDVRTTVESGLEILKSMFGYRRSGRWSNIDTGILGS
D*

GH02581.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 06:56:47
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF21939-PA 347 GF21939-PA 1..347 1..351 1753 94.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 06:56:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12792-PA 351 GG12792-PA 1..351 1..351 1847 99.1 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 06:56:48
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH12104-PA 354 GH12104-PA 1..353 1..351 1523 84.2 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:06:06
Subject Length Description Subject Range Query Range Score Percent Strand
arg-PA 351 CG18104-PA 1..351 1..351 1814 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 06:56:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15160-PA 350 GI15160-PA 1..349 1..351 1489 80.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 06:56:49
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20388-PA 356 GL20388-PA 1..356 1..351 1647 90.2 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 06:56:50
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA14794-PA 356 GA14794-PA 1..356 1..351 1651 90.2 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 06:56:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19073-PA 351 GM19073-PA 1..351 1..351 1829 98.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 06:56:51
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16510-PA 351 GD16510-PA 1..351 1..351 1832 98.3 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 06:56:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ14863-PA 193 GJ14863-PA 1..192 1..198 790 77.8 Plus
Dvir\GJ14864-PA 124 GJ14864-PA 1..121 231..349 565 91.7 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 06:56:52
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK16510-PA 349 GK16510-PA 1..349 1..351 1633 88 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 06:56:53
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16619-PA 363 GE16619-PA 1..363 1..351 1817 94.8 Plus