GH02584.complete Sequence
1849 bp (1849 high quality bases) assembled on 2001-09-19
GenBank Submission: AY059436
> GH02584.complete
TTTATTGCCAATCTCTTCGTGGGGTTATCCCCGTAAATTTGTGGTCGCTG
CTTTGCTCCATTTTTTGTTCTCGTGTTTAACGGTTTAAACTGAACTCATC
TTTGCATTGAGCAACAACAAGCCCGACATAACTGCACTCTGAGCGGCGCT
TCCTCTCCGATCTACCACCCGCTCCATTACAGGAAGTAGGAGTAGGACCC
TCTTCATCTTTCGTGGTCCGCGGGGGTCGCCCATTTCTGTTCAAGATTGT
CTGCCCATGGTTCTCAGCTCTGAGCTGCTCCAGGATGCCCTGCGGTCCAG
CAACAAGCTTCTATTCGAATGCTATGGCAGCCTGATCAGATGCTATCAGG
AGTGCGTTGAACTTCGCAAGGATAACAAGGATCGGACTAAGAGCCAAGAC
TACTGGGATGCAGAGTTTGTAGGTTCTGTGATCAAGCAGCTGGCAGAGAT
GGTTCGCCGCTCTCAGGAGCCTGAAAAGCTGTTAGAAGAGAACAATTCGA
AAACTGTTCGTCCTCTTGTCACTCGTTGAACTATCGCGATGCTAATGCGA
CACGCTTGCTGAATGTGGCGCTCACCCATCGTCAACGTTTGCATTTGGAT
CCGGATGAGATAGAGTTCGTGCTAAGCAGCTATTGGAGGCAATTGAATAC
AGACATTGAGGTGGGCGACACATTTGCCAGTTCAGCACTGGATTGTCTGG
AGCCGGCCATTAAGCTGATCCTTGGCTATAAGACTAACGAGGATTTCCTA
CTGCTCCTGCGCCGTCTCTCCTCACAAGTGGAGTAAGTGGCACGCCCTGC
GTCGCAAACGCAGCACATGGCGCTCCAAAATGTGCTAACCCTTTTGGCTC
TCTTTGCCAAATGCTCGTTGAGCAGCGTGAAGGGAGCGGTGAGTCTTCCC
CAGTACCTTATTCTCGTTCCATAATGTTCTCTTTAGATGCTTAATGACCA
TTTCAACCGGAACCCAAAGACTTGGCATATTCTGGTCATGCCCTATGACT
CCTAGAGGCCCAGCGCAATCTGGCTGGGAATCGTACGGTCCCTCTCACAG
GAGAGTCCCTGGATTGCCTTTTTGGCAGCATGTTGGATGTAGACATCAAG
CACTTGATCAGCCACGGCGGCAGTTGGCAGCACAGACAACCTGATTGTAA
CAGCACAACACAGTAACCTGATGTCACCCCGATCAGCCTAGCTCAGTGTC
CTGTGGCAGGATCTAATCCAGGCCATCATTAGCTATCGCGCGGAAAGAAA
GCTGACACAGGACATAAGTGAAACGGAGGTGGATGGTTTGGCGGACTTGG
GTCTGAAACTGGCCACTGTAATGGCCACAGTGCGCGCCACGCAGGCACTG
GCCGTGAAAAGTCGCACCCTTCCTGCTTATCTTCACCATTCGCCAAATGG
TAGCAACCGAAAGGCCCACGACGCTGTTCGAAAAGGTGTGTTTTACGTTA
AGGAAACGCCATTGGCCAACTCAAGGTCATGATTTAAGTTTTCTAGCATT
CCAAAGAATAGATCAAAGATTTTTGCTTAATGTTAAATACTATATAGCTC
TATATTCTTTAAAACGTAATACATTTGACATTTGCTTGATTGTTTGATGC
CCTAGCTGAGGAACATCTGGCAGTGCTCGCACAGCGGAGCCTCCTCTTCT
TCAATTCGATTACCACTGGAAATAAGATGATGGTCGATTGATTTTTAAAC
TAACGGGTTTCCCTAGGGGGATGCTTCTTCCTTCTGGGACTTAACTCACA
ATAAAGTCACGCAGTTGCGGCAAATAAACTTGGCGCACTCGCCGCAGGAG
TAGCCACACTCCTCGCAGAGATCCATCACGCAAAAAAAAAAAAAAAAAA
GH02584.complete Blast Records
Blast to MB8.fasta performed 2010-07-15 20:24:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
nc_21155.b | 1831 | nc_21155.b | 1..1831 | 1..1831 | 9155 | 100 | Plus |
nc_21155.a | 1504 | nc_21155.a | 207..1504 | 244..1541 | 6490 | 100 | Plus |
CG32817.b | 1840 | CG32817.b | 701..1840 | 1665..526 | 5700 | 100 | Minus |
nc_21155.a | 1504 | nc_21155.a | 14..208 | 1..195 | 975 | 100 | Plus |
CG32817.b | 1840 | CG32817.b | 59..244 | 186..1 | 870 | 97.8 | Minus |
CG32817.b | 1840 | CG32817.b | 618..700 | 1832..1750 | 415 | 100 | Minus |
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:26:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
chrX | 22417052 | chrX | 373897..375203 | 1831..525 | 6505 | 99.8 | Minus |
chrX | 22417052 | chrX | 377844..378280 | 954..525 | 1835 | 95.2 | Minus |
chrX | 22417052 | chrX | 372382..372803 | 1131..715 | 1705 | 94.6 | Minus |
chrX | 22417052 | chrX | 375266..375597 | 525..194 | 1660 | 100 | Minus |
chrX | 22417052 | chrX | 376385..376712 | 1831..1504 | 1610 | 99.4 | Minus |
chrX | 22417052 | chrX | 377174..377583 | 1562..1155 | 1460 | 91 | Minus |
chrX | 22417052 | chrX | 380872..381140 | 519..251 | 1135 | 94.8 | Minus |
chrX | 22417052 | chrX | 375634..375829 | 196..1 | 980 | 100 | Minus |
chrX | 22417052 | chrX | 373157..373342 | 186..1 | 855 | 97.3 | Minus |
chrX | 22417052 | chrX | 371883..372128 | 1831..1583 | 805 | 89.2 | Minus |
chrX | 22417052 | chrX | 377638..377811 | 1129..956 | 765 | 96 | Minus |
chrX | 22417052 | chrX | 372983..373111 | 323..194 | 540 | 96.2 | Minus |
chrX | 22417052 | chrX | 372207..372327 | 1287..1157 | 245 | 80.9 | Minus |
chrX | 22417052 | chrX | 372873..372939 | 519..453 | 245 | 91 | Minus |
chrX | 22417052 | chrX | 371441..371503 | 94..32 | 210 | 88.9 | Minus |
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:28:09
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18275-RA | 468 | CG18275-RA | 16..187 | 715..888 | 665 | 93.1 | Plus |
CG18275-RA | 468 | CG18275-RA | 187..313 | 1005..1131 | 590 | 97.6 | Plus |
CG18275-RA | 468 | CG18275-RA | 368..438 | 1157..1227 | 220 | 87.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:26:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 479863..481170 | 1832..525 | 6540 | 100 | Minus |
X | 23542271 | X | 483811..484247 | 954..525 | 1835 | 95.2 | Minus |
X | 23542271 | X | 478349..478770 | 1131..715 | 1690 | 94.3 | Minus |
X | 23542271 | X | 481233..481564 | 525..194 | 1660 | 100 | Minus |
X | 23542271 | X | 482351..482679 | 1832..1504 | 1615 | 99.4 | Minus |
X | 23542271 | X | 483141..483550 | 1562..1155 | 1460 | 91 | Minus |
X | 23542271 | X | 486839..487107 | 519..251 | 1135 | 94.8 | Minus |
X | 23542271 | X | 481601..481796 | 196..1 | 980 | 100 | Minus |
X | 23542271 | X | 479124..479309 | 186..1 | 870 | 97.8 | Minus |
X | 23542271 | X | 477849..478095 | 1832..1583 | 810 | 89.2 | Minus |
X | 23542271 | X | 483605..483778 | 1129..956 | 780 | 96.6 | Minus |
X | 23542271 | X | 478950..479078 | 323..194 | 540 | 96.2 | Minus |
X | 23542271 | X | 478174..478294 | 1287..1157 | 245 | 80.9 | Minus |
X | 23542271 | X | 478840..478906 | 519..453 | 245 | 91 | Minus |
X | 23542271 | X | 477408..477470 | 94..32 | 210 | 88.9 | Minus |
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:47:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23527363 | X | 487961..489268 | 1832..525 | 6540 | 100 | Minus |
X | 23527363 | X | 491947..492345 | 923..525 | 1800 | 96.7 | Minus |
X | 23527363 | X | 489331..489662 | 525..194 | 1660 | 100 | Minus |
X | 23527363 | X | 490449..490777 | 1832..1504 | 1615 | 99.3 | Minus |
X | 23527363 | X | 491239..491648 | 1562..1155 | 1470 | 90.9 | Minus |
X | 23527363 | X | 494937..495205 | 519..251 | 1135 | 94.7 | Minus |
X | 23527363 | X | 486447..486657 | 1131..921 | 995 | 98.1 | Minus |
X | 23527363 | X | 489699..489894 | 196..1 | 980 | 100 | Minus |
X | 23527363 | X | 487222..487407 | 186..1 | 870 | 97.8 | Minus |
X | 23527363 | X | 485947..486193 | 1832..1583 | 820 | 89.2 | Minus |
X | 23527363 | X | 486665..486868 | 920..715 | 810 | 93.6 | Minus |
X | 23527363 | X | 491703..491876 | 1129..956 | 780 | 96.5 | Minus |
X | 23527363 | X | 487048..487176 | 323..194 | 550 | 96.1 | Minus |
X | 23527363 | X | 486938..487004 | 519..453 | 245 | 91 | Minus |
X | 23527363 | X | 486322..486392 | 1227..1157 | 220 | 87.3 | Minus |
X | 23527363 | X | 485506..485568 | 94..32 | 210 | 88.8 | Minus |
X | 23527363 | X | 485432..485500 | 184..115 | 190 | 87.1 | Minus |
X | 23527363 | X | 486272..486327 | 1287..1232 | 175 | 87.5 | Minus |
X | 23527363 | X | 487005..487043 | 392..354 | 165 | 94.8 | Minus |
X | 23527363 | X | 491909..491942 | 954..921 | 155 | 97 | Minus |
Blast to na_te.dros performed on 2019-03-16 08:26:07 has no hits.
GH02584.complete Sim4 Records
Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:27:19 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
chrX | 373897..375202 | 526..1831 | 99 | <- | Minus |
chrX | 375266..375595 | 196..525 | 100 | <- | Minus |
chrX | 375635..375829 | 1..195 | 100 | | Minus |
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:08:16 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18273-RA | 307..579 | 245..517 | 93 | -> | Plus |
CG18273-RA | 3041..3632 | 518..1126 | 91 | -> | Plus |
CG18273-RA | 3657..3972 | 1127..1435 | 91 | | Plus |
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:10:12 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18273-RA | 307..579 | 245..517 | 93 | -> | Plus |
CG18273-RA | 3041..3632 | 518..1126 | 91 | -> | Plus |
CG18273-RA | 3657..3972 | 1127..1435 | 91 | | Plus |
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:16:47 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18273-RA | 307..579 | 245..517 | 93 | -> | Plus |
CG18273-RA | 3041..3632 | 518..1126 | 91 | -> | Plus |
CG18273-RA | 3657..3972 | 1127..1435 | 91 | | Plus |
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:41:03 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18273-RA | 307..579 | 245..517 | 93 | -> | Plus |
CG18273-RA | 3657..3972 | 1127..1435 | 91 | | Plus |
CG18273-RA | 3041..3632 | 518..1126 | 91 | -> | Plus |
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:40:26 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18273-RA | 3657..3972 | 1127..1435 | 91 | | Plus |
CG18273-RA | 307..579 | 245..517 | 93 | -> | Plus |
CG18273-RA | 3041..3632 | 518..1126 | 91 | -> | Plus |
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:28:09 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18275-RA | 188..313 | 1006..1131 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:01:14 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18166-RA | 1..1821 | 1..1831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:10:12 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18273-RA | 381..653 | 245..517 | 93 | -> | Plus |
CG18273-RA | 3115..3706 | 518..1126 | 91 | -> | Plus |
CG18273-RA | 3731..4046 | 1127..1435 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:16:47 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18273-RA | 408..680 | 245..517 | 93 | -> | Plus |
CG18273-RA | 3142..3733 | 518..1126 | 91 | -> | Plus |
CG18273-RA | 3758..4073 | 1127..1435 | 91 | | Plus |
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:41:03 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18166-RA | 1..1821 | 1..1831 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:40:26 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG18273-RA | 408..680 | 245..517 | 93 | -> | Plus |
CG18273-RA | 3142..3733 | 518..1126 | 91 | -> | Plus |
CG18273-RA | 3758..4073 | 1127..1435 | 91 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:27:19 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 479864..481169 | 526..1831 | 100 | <- | Minus |
X | 481233..481562 | 196..525 | 100 | <- | Minus |
X | 481602..481796 | 1..195 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:27:19 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 479864..481169 | 526..1831 | 100 | <- | Minus |
X | 481233..481562 | 196..525 | 100 | <- | Minus |
X | 481602..481796 | 1..195 | 100 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:27:19 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 479864..481169 | 526..1831 | 100 | <- | Minus |
X | 481233..481562 | 196..525 | 100 | <- | Minus |
X | 481602..481796 | 1..195 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:16:47 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 375266..375595 | 196..525 | 100 | <- | Minus |
arm_X | 373897..375202 | 526..1831 | 100 | <- | Minus |
arm_X | 375635..375829 | 1..195 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:18:39 Download gff for
GH02584.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 487962..489267 | 526..1831 | 100 | <- | Minus |
X | 489331..489660 | 196..525 | 100 | <- | Minus |
X | 489700..489894 | 1..195 | 100 | | Minus |
GH02584.pep Sequence
Translation from 256 to 528
> GH02584.pep
MVLSSELLQDALRSSNKLLFECYGSLIRCYQECVELRKDNKDRTKSQDYW
DAEFVGSVIKQLAEMVRRSQEPEKLLEENNSKTVRPLVTR*
GH02584.pep Blast Records
Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:03:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dana\GF20810-PA | 1372 | GF20810-PA | 109..193 | 3..88 | 176 | 48.3 | Plus |
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:03:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dere\GG12758-PA | 1375 | GG12758-PA | 107..194 | 1..88 | 372 | 79.5 | Plus |
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18273-PA | 1377 | CG18273-PA | 107..194 | 1..88 | 400 | 89.8 | Plus |
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:03:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dper\GL20167-PA | 1386 | GL20167-PA | 111..192 | 6..88 | 160 | 45.8 | Plus |
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:03:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dpse\GA26711-PA | 1388 | GA26711-PA | 111..192 | 6..88 | 160 | 45.8 | Plus |
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:03:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsec\GM19038-PA | 1371 | GM19038-PA | 107..194 | 1..88 | 404 | 87.5 | Plus |
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:03:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dsim\GD16477-PA | 915 | GD16477-PA | 107..150 | 1..44 | 193 | 84.1 | Plus |
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:03:44
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Dyak\GE16584-PA | 1377 | GE16584-PA | 107..194 | 1..88 | 374 | 78.4 | Plus |
GH02584.hyp Sequence
Translation from 256 to 528
> GH02584.hyp
MVLSSELLQDALRSSNKLLFECYGSLIRCYQECVELRKDNKDRTKSQDYW
DAEFVGSVIKQLAEMVRRSQEPEKLLEENNSKTVRPLVTR*
GH02584.hyp Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:28:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG18273-PA | 1377 | CG18273-PA | 107..194 | 1..88 | 400 | 89.8 | Plus |