Clone GH02584 Report

Search the DGRC for GH02584

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:25
Well:84
Vector:pOT2
Associated Gene/TranscriptCG18166-RA
Protein status:GH02584.pep: validated not full length
Preliminary Size:2049
Sequenced Size:1849

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13372 2001-01-01 Release 2 assignment
CG18166 2001-01-01 Release 2 assignment
CG18273 2001-01-01 Release 2 assignment
CG18166 2001-09-19 Blastp of sequenced clone
CG18166 2003-01-01 Sim4 clustering to Release 3
CG18273 2008-04-29 Release 5.5 accounting
CG18166 2008-08-15 Release 5.9 accounting
CG18166 2008-12-18 5.12 accounting

Clone Sequence Records

GH02584.complete Sequence

1849 bp (1849 high quality bases) assembled on 2001-09-19

GenBank Submission: AY059436

> GH02584.complete
TTTATTGCCAATCTCTTCGTGGGGTTATCCCCGTAAATTTGTGGTCGCTG
CTTTGCTCCATTTTTTGTTCTCGTGTTTAACGGTTTAAACTGAACTCATC
TTTGCATTGAGCAACAACAAGCCCGACATAACTGCACTCTGAGCGGCGCT
TCCTCTCCGATCTACCACCCGCTCCATTACAGGAAGTAGGAGTAGGACCC
TCTTCATCTTTCGTGGTCCGCGGGGGTCGCCCATTTCTGTTCAAGATTGT
CTGCCCATGGTTCTCAGCTCTGAGCTGCTCCAGGATGCCCTGCGGTCCAG
CAACAAGCTTCTATTCGAATGCTATGGCAGCCTGATCAGATGCTATCAGG
AGTGCGTTGAACTTCGCAAGGATAACAAGGATCGGACTAAGAGCCAAGAC
TACTGGGATGCAGAGTTTGTAGGTTCTGTGATCAAGCAGCTGGCAGAGAT
GGTTCGCCGCTCTCAGGAGCCTGAAAAGCTGTTAGAAGAGAACAATTCGA
AAACTGTTCGTCCTCTTGTCACTCGTTGAACTATCGCGATGCTAATGCGA
CACGCTTGCTGAATGTGGCGCTCACCCATCGTCAACGTTTGCATTTGGAT
CCGGATGAGATAGAGTTCGTGCTAAGCAGCTATTGGAGGCAATTGAATAC
AGACATTGAGGTGGGCGACACATTTGCCAGTTCAGCACTGGATTGTCTGG
AGCCGGCCATTAAGCTGATCCTTGGCTATAAGACTAACGAGGATTTCCTA
CTGCTCCTGCGCCGTCTCTCCTCACAAGTGGAGTAAGTGGCACGCCCTGC
GTCGCAAACGCAGCACATGGCGCTCCAAAATGTGCTAACCCTTTTGGCTC
TCTTTGCCAAATGCTCGTTGAGCAGCGTGAAGGGAGCGGTGAGTCTTCCC
CAGTACCTTATTCTCGTTCCATAATGTTCTCTTTAGATGCTTAATGACCA
TTTCAACCGGAACCCAAAGACTTGGCATATTCTGGTCATGCCCTATGACT
CCTAGAGGCCCAGCGCAATCTGGCTGGGAATCGTACGGTCCCTCTCACAG
GAGAGTCCCTGGATTGCCTTTTTGGCAGCATGTTGGATGTAGACATCAAG
CACTTGATCAGCCACGGCGGCAGTTGGCAGCACAGACAACCTGATTGTAA
CAGCACAACACAGTAACCTGATGTCACCCCGATCAGCCTAGCTCAGTGTC
CTGTGGCAGGATCTAATCCAGGCCATCATTAGCTATCGCGCGGAAAGAAA
GCTGACACAGGACATAAGTGAAACGGAGGTGGATGGTTTGGCGGACTTGG
GTCTGAAACTGGCCACTGTAATGGCCACAGTGCGCGCCACGCAGGCACTG
GCCGTGAAAAGTCGCACCCTTCCTGCTTATCTTCACCATTCGCCAAATGG
TAGCAACCGAAAGGCCCACGACGCTGTTCGAAAAGGTGTGTTTTACGTTA
AGGAAACGCCATTGGCCAACTCAAGGTCATGATTTAAGTTTTCTAGCATT
CCAAAGAATAGATCAAAGATTTTTGCTTAATGTTAAATACTATATAGCTC
TATATTCTTTAAAACGTAATACATTTGACATTTGCTTGATTGTTTGATGC
CCTAGCTGAGGAACATCTGGCAGTGCTCGCACAGCGGAGCCTCCTCTTCT
TCAATTCGATTACCACTGGAAATAAGATGATGGTCGATTGATTTTTAAAC
TAACGGGTTTCCCTAGGGGGATGCTTCTTCCTTCTGGGACTTAACTCACA
ATAAAGTCACGCAGTTGCGGCAAATAAACTTGGCGCACTCGCCGCAGGAG
TAGCCACACTCCTCGCAGAGATCCATCACGCAAAAAAAAAAAAAAAAAA

GH02584.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:24:38
Subject Length Description Subject Range Query Range Score Percent Strand
nc_21155.b 1831 nc_21155.b 1..1831 1..1831 9155 100 Plus
nc_21155.a 1504 nc_21155.a 207..1504 244..1541 6490 100 Plus
CG32817.b 1840 CG32817.b 701..1840 1665..526 5700 100 Minus
nc_21155.a 1504 nc_21155.a 14..208 1..195 975 100 Plus
CG32817.b 1840 CG32817.b 59..244 186..1 870 97.8 Minus
CG32817.b 1840 CG32817.b 618..700 1832..1750 415 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 08:26:09
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 373897..375203 1831..525 6505 99.8 Minus
chrX 22417052 chrX 377844..378280 954..525 1835 95.2 Minus
chrX 22417052 chrX 372382..372803 1131..715 1705 94.6 Minus
chrX 22417052 chrX 375266..375597 525..194 1660 100 Minus
chrX 22417052 chrX 376385..376712 1831..1504 1610 99.4 Minus
chrX 22417052 chrX 377174..377583 1562..1155 1460 91 Minus
chrX 22417052 chrX 380872..381140 519..251 1135 94.8 Minus
chrX 22417052 chrX 375634..375829 196..1 980 100 Minus
chrX 22417052 chrX 373157..373342 186..1 855 97.3 Minus
chrX 22417052 chrX 371883..372128 1831..1583 805 89.2 Minus
chrX 22417052 chrX 377638..377811 1129..956 765 96 Minus
chrX 22417052 chrX 372983..373111 323..194 540 96.2 Minus
chrX 22417052 chrX 372207..372327 1287..1157 245 80.9 Minus
chrX 22417052 chrX 372873..372939 519..453 245 91 Minus
chrX 22417052 chrX 371441..371503 94..32 210 88.9 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:28:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG18275-RA 468 CG18275-RA 16..187 715..888 665 93.1 Plus
CG18275-RA 468 CG18275-RA 187..313 1005..1131 590 97.6 Plus
CG18275-RA 468 CG18275-RA 368..438 1157..1227 220 87.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 08:26:07
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 479863..481170 1832..525 6540 100 Minus
X 23542271 X 483811..484247 954..525 1835 95.2 Minus
X 23542271 X 478349..478770 1131..715 1690 94.3 Minus
X 23542271 X 481233..481564 525..194 1660 100 Minus
X 23542271 X 482351..482679 1832..1504 1615 99.4 Minus
X 23542271 X 483141..483550 1562..1155 1460 91 Minus
X 23542271 X 486839..487107 519..251 1135 94.8 Minus
X 23542271 X 481601..481796 196..1 980 100 Minus
X 23542271 X 479124..479309 186..1 870 97.8 Minus
X 23542271 X 477849..478095 1832..1583 810 89.2 Minus
X 23542271 X 483605..483778 1129..956 780 96.6 Minus
X 23542271 X 478950..479078 323..194 540 96.2 Minus
X 23542271 X 478174..478294 1287..1157 245 80.9 Minus
X 23542271 X 478840..478906 519..453 245 91 Minus
X 23542271 X 477408..477470 94..32 210 88.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:47:19
Subject Length Description Subject Range Query Range Score Percent Strand
X 23527363 X 487961..489268 1832..525 6540 100 Minus
X 23527363 X 491947..492345 923..525 1800 96.7 Minus
X 23527363 X 489331..489662 525..194 1660 100 Minus
X 23527363 X 490449..490777 1832..1504 1615 99.3 Minus
X 23527363 X 491239..491648 1562..1155 1470 90.9 Minus
X 23527363 X 494937..495205 519..251 1135 94.7 Minus
X 23527363 X 486447..486657 1131..921 995 98.1 Minus
X 23527363 X 489699..489894 196..1 980 100 Minus
X 23527363 X 487222..487407 186..1 870 97.8 Minus
X 23527363 X 485947..486193 1832..1583 820 89.2 Minus
X 23527363 X 486665..486868 920..715 810 93.6 Minus
X 23527363 X 491703..491876 1129..956 780 96.5 Minus
X 23527363 X 487048..487176 323..194 550 96.1 Minus
X 23527363 X 486938..487004 519..453 245 91 Minus
X 23527363 X 486322..486392 1227..1157 220 87.3 Minus
X 23527363 X 485506..485568 94..32 210 88.8 Minus
X 23527363 X 485432..485500 184..115 190 87.1 Minus
X 23527363 X 486272..486327 1287..1232 175 87.5 Minus
X 23527363 X 487005..487043 392..354 165 94.8 Minus
X 23527363 X 491909..491942 954..921 155 97 Minus
Blast to na_te.dros performed on 2019-03-16 08:26:07 has no hits.

GH02584.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 08:27:19 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 373897..375202 526..1831 99 <- Minus
chrX 375266..375595 196..525 100 <- Minus
chrX 375635..375829 1..195 100   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:08:16 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18273-RA 307..579 245..517 93 -> Plus
CG18273-RA 3041..3632 518..1126 91 -> Plus
CG18273-RA 3657..3972 1127..1435 91   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:10:12 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18273-RA 307..579 245..517 93 -> Plus
CG18273-RA 3041..3632 518..1126 91 -> Plus
CG18273-RA 3657..3972 1127..1435 91   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 10:16:47 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18273-RA 307..579 245..517 93 -> Plus
CG18273-RA 3041..3632 518..1126 91 -> Plus
CG18273-RA 3657..3972 1127..1435 91   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:41:03 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18273-RA 307..579 245..517 93 -> Plus
CG18273-RA 3657..3972 1127..1435 91   Plus
CG18273-RA 3041..3632 518..1126 91 -> Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 09:40:26 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18273-RA 3657..3972 1127..1435 91   Plus
CG18273-RA 307..579 245..517 93 -> Plus
CG18273-RA 3041..3632 518..1126 91 -> Plus
Sim4 to dmel-all-all_noncoding-r5.12.fasta performed 2010-04-22 16:28:09 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18275-RA 188..313 1006..1131 97   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:01:14 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18166-RA 1..1821 1..1831 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:10:12 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18273-RA 381..653 245..517 93 -> Plus
CG18273-RA 3115..3706 518..1126 91 -> Plus
CG18273-RA 3731..4046 1127..1435 91   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 10:16:47 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18273-RA 408..680 245..517 93 -> Plus
CG18273-RA 3142..3733 518..1126 91 -> Plus
CG18273-RA 3758..4073 1127..1435 91   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:41:03 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18166-RA 1..1821 1..1831 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 09:40:26 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
CG18273-RA 408..680 245..517 93 -> Plus
CG18273-RA 3142..3733 518..1126 91 -> Plus
CG18273-RA 3758..4073 1127..1435 91   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:27:19 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
X 479864..481169 526..1831 100 <- Minus
X 481233..481562 196..525 100 <- Minus
X 481602..481796 1..195 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:27:19 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
X 479864..481169 526..1831 100 <- Minus
X 481233..481562 196..525 100 <- Minus
X 481602..481796 1..195 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 08:27:19 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
X 479864..481169 526..1831 100 <- Minus
X 481233..481562 196..525 100 <- Minus
X 481602..481796 1..195 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 10:16:47 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 375266..375595 196..525 100 <- Minus
arm_X 373897..375202 526..1831 100 <- Minus
arm_X 375635..375829 1..195 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:18:39 Download gff for GH02584.complete
Subject Subject Range Query Range Percent Splice Strand
X 487962..489267 526..1831 100 <- Minus
X 489331..489660 196..525 100 <- Minus
X 489700..489894 1..195 100   Minus

GH02584.pep Sequence

Translation from 256 to 528

> GH02584.pep
MVLSSELLQDALRSSNKLLFECYGSLIRCYQECVELRKDNKDRTKSQDYW
DAEFVGSVIKQLAEMVRRSQEPEKLLEENNSKTVRPLVTR*

GH02584.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 19:03:40
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20810-PA 1372 GF20810-PA 109..193 3..88 176 48.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 19:03:41
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12758-PA 1375 GG12758-PA 107..194 1..88 372 79.5 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:26:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG18273-PA 1377 CG18273-PA 107..194 1..88 400 89.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 19:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20167-PA 1386 GL20167-PA 111..192 6..88 160 45.8 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 19:03:42
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA26711-PA 1388 GA26711-PA 111..192 6..88 160 45.8 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 19:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19038-PA 1371 GM19038-PA 107..194 1..88 404 87.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 19:03:43
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD16477-PA 915 GD16477-PA 107..150 1..44 193 84.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 19:03:44
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16584-PA 1377 GE16584-PA 107..194 1..88 374 78.4 Plus

GH02584.hyp Sequence

Translation from 256 to 528

> GH02584.hyp
MVLSSELLQDALRSSNKLLFECYGSLIRCYQECVELRKDNKDRTKSQDYW
DAEFVGSVIKQLAEMVRRSQEPEKLLEENNSKTVRPLVTR*

GH02584.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:28:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG18273-PA 1377 CG18273-PA 107..194 1..88 400 89.8 Plus