Clone GH02603 Report

Search the DGRC for GH02603

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:26
Well:3
Vector:pOT2
Associated Gene/TranscriptCG42761-RA
Protein status:GH02603.pep2: wuzgold GH02603.pep: wuzgold
Preliminary Size:3700
Sequenced Size:1867

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG9759 2001-01-01 Release 2 assignment
CG9759 2003-01-01 Sim4 clustering to Release 3
CG9759 2008-04-29 Release 5.5 accounting
CG9759 2008-08-15 Release 5.9 accounting
CG9759 2008-12-18 5.12 accounting

Clone Sequence Records

GH02603.complete Sequence

1867 bp (1867 high quality bases) assembled on 2002-05-09

GenBank Submission: AY102653.1

> GH02603.complete
AACAAGACAACGGAGACGGAACGATGCGTATTTACCACCTGAATCTATTA
GTGCTAAGTGCCGGCCTACTGGTCCTGCTGGCCCAGTCGGGGACCACGGC
CCCCCCAGGCGGATGAGGATGTACAGCAACTGACTCTGGCGGATGTAAAT
CAGGCGGAGGAGCAGCAGGAGATGCCGGCTGTTCGCCTGGCCAGACAATT
TGGATTCGGCCGTGAAGGATTCGGCAGAGGACGCGGCGGATTCGGCGGAT
TTGGCGGAAGGCGAGGCGGCGGTGGATTCCGGAGACCCGGTTTCGGTGGC
GGTGGATTCGGCGGATTCTACCCACCGCCACCGCCCTTCTTCGGCGGCCC
CTTTTACGGCTAGGTGTTCTTAATTTAATGTGCATATATATATGTGATAC
GATCAGACCAGGATTAGCTACTAATATATCAACACGAGCTGCTGCTCTCA
TTATCTTACCAAGTGCAGAACGAGTTTTTATGTGGTAAGCACTCTTTTTT
TTATATCCATGACAAGAAGTGCTCAGCTGTATTAAATATTATGGGCGTTA
AACGGATGCGGTATATGAATATCTCTGGAAATGTTCATAAAATAACAAGA
GCACTTTATCTTTGGCCAAGTTTAAATATTCAATTTATAACTCCTTTTAG
AAAGACAAATCTAGATTTCTAATGATAAGTTGCAAACTGGCAGAGCTTTT
AGTCAAAATCAAAAGAAGTCTCTTCTGTAATTATCAAAACAAGTACTTGT
TTACTCTGCTTAAGACGGATAATTCTCATAAATAGAGTTGCTTGCATTTA
AAAAATGTTATTTTTTTTTAAATGGAATTAAGATGAGTACACTTCGTTGC
TGCATTGTTATTCTTTTTGGAATACTGATTTTTGGAGTGGCAGTGGCTGA
AAACAATAAGTTTCAGGATGAAAGGGATGAACATCATTTTCAGCCCGATG
AAGTAAAAAGTTCAGATGAAGCTATAGAACGGATACGACGTCAGATTGGA
GCTTTTGGAATTGGCGCTGGATTTTATGGAGGAAGGCATGTTGATTCAAT
CGGTAATCCCTATTATGGGGCTCCATATGGAAATTCCTACTTTGTTCAAC
CTTACTGGCATTACTTCCATGATCGCAGATTTGGAGCCAACTACGGTTTC
GGTGGACATTTCTATGGTCGCTAGACAAATTTTGTGCTCAACGTCAGTCG
ATGTCGACTTAATAAAGTTAAACATTAAAATATATAAGCACTGTGGCTAA
AAAGGGTTGATCGGAGGGGGTGGATTTGCCCAAGGGCGAAGCTGAAATTA
TAAAAATTTCATTTCAAATCACGTTGAGTGACATGCAGACTGAGCACAGG
ACAAGAAAACTTAATCAGCGATGTTAACGATGTCAGGCTGCGGGAAACAG
GATGTCATTCTGTACCATCAAATGGCTCCATTCCGGGTCGCGTACTCGTA
TTTTATTCCGTTCTCTACTTTCTTTATCCTTAATTTTCTTCTTTTTTTTC
GTTTTATTTTCTAATTCATATGCGTTTCAAGTTTTAATTACGTGGGAAAA
AAGGCGAATGAACAAACGAGCGGGTGCCATCCAGGGACCAAAGCCAGGCA
GGACCACGGCCAGGACTTCTTCTGGCTCCTTTTTGGCTTGACTGACAGAC
AGGAGCCGCAGCAGAAGAGCAGCTCAACATGAAAATAACAAAATACGCCC
AATCAGACCAGCCAGAAATGGAAACGAGACGATACACACAGGGTAGATAG
ACGACCAGACCTAGAGACAGACGGCTACTCGTACTACAGCTACAGCCACA
AAAAAAGGCAAAAAAATTAAGTAGCGAAATCAGCGGGTGAAATGAAAAAA
AAAAAAAAAAAAAAAAA

GH02603.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 19:09:05
Subject Length Description Subject Range Query Range Score Percent Strand
CG9759.b 1259 CG9759.b 39..521 1..484 2380 99.7 Plus
CG9759.a 590 CG9759.a 39..521 1..484 2380 99.7 Plus
CG9759-RA 494 CG9759-RA 26..494 1..470 2310 99.7 Plus
CG9759.b 1259 CG9759.b 521..857 1531..1867 1655 99.4 Plus
CG9759.a 590 CG9759.a 521..590 1531..1600 350 100 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 18:01:18
Subject Length Description Subject Range Query Range Score Percent Strand
chr3R 27901430 chr3R 9432293..9434136 1844..1 9080 99.7 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:28:11 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 18:01:15
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 13607356..13609221 1867..1 9255 99.8 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 20:40:00
Subject Length Description Subject Range Query Range Score Percent Strand
3R 31820162 3R 13348187..13350052 1867..1 9265 99.8 Minus
Blast to na_te.dros performed 2019-03-16 18:01:16
Subject Length Description Subject Range Query Range Score Percent Strand
297 6995 297 DMIS297 6995bp Derived from X03431 (g8146) (Rel. 36, Last updated, Version 2). 2038..2183 1294..1434 140 59.9 Plus

GH02603.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 18:02:27 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
chr3R 9432298..9434136 1..1839 98   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:08:19 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RB 1..339 24..363 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 17:52:54 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG42761-RA 1..342 833..1174 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:06:58 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG42761-RA 1..342 833..1174 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 18:45:28 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RB 1..339 24..363 99   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 13:26:33 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RA 1..339 24..363 99   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 21:31:10 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RA 26..1868 1..1844 99   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 17:52:54 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RA 26..494 1..470 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:06:58 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RA 26..494 1..470 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 18:45:28 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RA 26..1868 1..1844 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 13:26:33 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
CG9759-RC 26..1868 1..1844 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:02:27 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13607379..13609221 1..1844 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:02:27 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13607379..13609221 1..1844 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 18:02:27 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13607379..13609221 1..1844 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:06:58 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 9433101..9434943 1..1844 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 15:17:55 Download gff for GH02603.complete
Subject Subject Range Query Range Percent Splice Strand
3R 13348210..13350052 1..1844 99   Minus

GH02603.hyp Sequence

Translation from 2 to 362

> GH02603.hyp
QDNGDGTMRIYHLNLLVLSAGLLVLLAQSGTTAPQADEDVQQLTLADVNQ
AEEQQEMPAVRLARQFGFGREGFGRGRGGFGGFGGRRGGGGFRRPGFGGG
GFGGFYPPPPPFFGGPFYG*

GH02603.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:50:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG9759-PB 112 CG9759-PB 1..112 8..119 604 100 Plus
CG9759-PC 112 CG9759-PC 1..112 8..119 604 100 Plus
CG9759-PA 112 CG9759-PA 1..112 8..119 604 100 Plus
CG17738-PA 110 CG17738-PA 8..110 21..119 141 43.4 Plus

GH02603.pep Sequence

Translation from 832 to 1173

> GH02603.pep
MSTLRCCIVILFGILIFGVAVAENNKFQDERDEHHFQPDEVKSSDEAIER
IRRQIGAFGIGAGFYGGRHVDSIGNPYYGAPYGNSYFVQPYWHYFHDRRF
GANYGFGGHFYGR*

GH02603.pep Blast Records

Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 18:00:01
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD20490-PA 113 GD20490-PA 1..113 1..113 518 88.5 Plus

GH02603.pep2 Sequence

Translation from 1401 to 1640

> GH02603.pep2
MSFCTIKWLHSGSRTRILFRSLLSLSLIFFFFFVLFSNSYAFQVLITWEK
RRMNKRAGAIQGPKPGRTTARTSSGSFLA*
Sequence GH02603.pep2 has no blast hits.