BDGP Sequence Production Resources |
Search the DGRC for GH02671
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 26 |
Well: | 71 |
Vector: | pOT2 |
Associated Gene/Transcript | lqfR-RC |
Protein status: | GH02671.pep: gold |
Preliminary Size: | 2924 |
Sequenced Size: | 2709 |
Gene | Date | Evidence |
---|---|---|
CG13853 | 2001-01-01 | Release 2 assignment |
CG13854 | 2001-01-01 | Release 2 assignment |
CG31170 | 2001-10-10 | Blastp of sequenced clone |
CG31170 | 2003-01-01 | Sim4 clustering to Release 3 |
epsin-like | 2008-04-29 | Release 5.5 accounting |
epsin-like | 2008-08-15 | Release 5.9 accounting |
epsin-like | 2008-12-18 | 5.12 accounting |
2709 bp (2709 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060606
> GH02671.complete AGCTCACCAAATATTAGCTGCTGTGATTTTGTTTTACAATTTTCGTTTAA ATTTTTACATTTTTGTTTGCGGAAAGCGCGGGTGCGAGACAGGTGCGCCG TTTCCATGCAAAAGTGCAAATCGTCAGCTGCAAAACAGTCAGAAAACGGC ACGCCAAGCGAAAACGAGTTCGACGTCTTGTTGTAGTTGGATTTTCCAGC CACTTTTCGACGAGATTGTGTGAAAAATTCCGTAGCATTCAATAGTCTCA AAATGGTGGATAAATTCATCAGCATGTGGAAAGTGCGCGAATTGGCGGAC AAGGTCACCAATGTCGTGATGAATTACACGGAAACGGAGGGCAAGGTGCG GGAGGCCACCAACGATGATCCTTGGGGGCCTACAGGACCCCTCATGCAGG AATTGGCCTATTCCACCTTCTCATACGAAACATTCCCGGAGGTGATGTCC ATGCTGTGGAAGCGCATGCTGCAGGACAATAAAACCAACTGGCGACGCAC GTACAAGAGCCTCCTTCTGCTAAACTATTTGGTGCGAAACGGCTCTGAAC GGGTGGTAACCTCCTCTCGGGAGCACATCTACGATCTGCGCTCGCTGGAG AACTATACATTCACCGACGAGGGCGGCAAGGATCAGGGTATTAATGTTAG GCATAAGGTACGAGAGCTTATAGACTTTATTCAGGATGATGATCGTTTGC GCGAGGAGCGCAAAAAGGCGAAGAAGAACAAGGACAAGTACATCGGCATG AGCAGCGACGCCATGGGCATGCGAAGCGGTGGCTACAGCGGCTATAGCGG TGGATCTGGAGGAGGCGGCGGTGGCAGCGGTGGCTACAATGATGGCGACT ATCGCTCTAGTCGTGGAGACAATTGGTACTCCGACAAAAGCGCCGACAAG GATCGGTATGAGGATGATGATACTCACTACGATGGAGAGCGAGAGGGATC CGATAGCGACTCACCCAGTCCAAGACGTAACTATCGATACAATGACCGTG CGAGTCCTGCCGAAGTAGCCAGCGAGGCCAAACCTTCCAGCCTCAACATG AACATTCGTTCGAAGACCGTCAGTTCCCCTGTCTCCAAGCAGCCCACTTC AACGGCTTCTGCCAAGCCAGCGCTGTCCCAGAAGAAGATCGATCTGGGTG CGGCAGCAAACTTTGGAAAGCCAGCTCCTGGCGGTGCTGCTGGCATTCAC TCACCAACTCACCGTGACACTCCCACCAGCGTGGACTTGATGGGCGGCGC TTCGCCATCGCCGTCTACTTCCAAGGCAAACAATAATACGCAAAGCAATA ACAACGATCTGCTGGACGATCTGTTCAAGACCTGCTCGCCACCGCCGGGG CAGGAGAAGACGCTGAACAGTGCTGCCGTGATTGTGGATGACGATGATGA CTTCAATCCGCGTGCCAGCGATGCTAGCCAGCAGGAATTCGGCGACTTCG CCTCTGCTTTCGGGCAGCCCTCGGCGGGATCGACGATCAGCGAGCCACCA TCAACGGGCCTGGTTCCGGCTGCGAACGATGAGTTCGCCGACTTTGCGGC GTTCCAAGGCTCGACAACGTCGACATCTGCGCTGGACGGTAATTTGCTGA AGACTGCCACGCCGGCGAACGATTCGTTTGACCTGTTTAATTCAGCTCCC ACCTCGACGGCAGCAGCCACAACGGCTACAGATCTCCTGGCAGGCCTGGG CGATCTGTCCATTCACCAAAGCATGCCCATGGACAATATGATGCCTCCCA TTCCCGCCGTCACGGGCAATAATCTGCTCCAGCCCATGTCGGTGACCAAT AATAACAATAATACCAACGGAGGCGCAGTCCCCGCCGCTGCCAGTGTCCA GTCTACCGCTGTGGGCGCCACCTGGTCGGGCGACCTGAAGGGCGGCAAGA TGAACATTGACCTGGACAATCTGCTGATGAGCAAGTCGGGCAAGCCCAGT GCCCCGGCCCCTTCGATGAATGCCCTGAAGACCAACAGTCCGGCAAAGGC GCCACTGAATGTGCAGACGGGTGGCGGATTCCCTGGACTGTCGCCAATGA CCAGTCCGAACATTTTTGGGGCTCCGGCACCGCAGCAAAGCATTCCACAA AACCAATCAGCATTTGCCAACTTTGGAGCTTTCCAGCAGCAGCAGCAGAA TCACAGCAATAATAACAATAATAGCTCGTCGGCATTCGACTTGTTTCAAT GATATTTTTTAGCCTAATTTAACCCAACCAACCTACTACCCAAAATGTCC ACTCTCACATTCACATTTCCACGATCGCTAAACTTGTCAGTTCTATATAT TATTTACGTTTTCCTTTCCCCTTGCTGTACAAAGTTTGCGACACGTGCAA TTTGTTTCTAAATTCGTTGTTAAACAATTTACCCCCGATGCAATTTTCCG GATCAAACCCATTAATTCCACATCCGTCCTGATCGTCCACTCGGAATTTG AAAGTCGTCATCAAATGCAATACACAGAGTAGTTGAATAATGGTTGTACT AAACGGATTCGTTAGCACAACGCGCGGACGGACGGCTGAGCGATCCAACA TTGAAATTGTTAAACAAAATACTACACGTAATAAAATCAAACAATTTTAG CAATAGTTAACGTTACGATGTGTCTGTATATAAATTGAATGTAAAGCAAA TATGAAATATAAAACAATTGAAACCAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18241651..18242590 | 1732..2675 | 4535 | 98.9 | Plus |
chr3R | 27901430 | chr3R | 18237064..18237823 | 973..1732 | 3770 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 18236452..18236823 | 506..877 | 1800 | 98.9 | Plus |
chr3R | 27901430 | chr3R | 18234868..18235172 | 1..305 | 1525 | 100 | Plus |
chr3R | 27901430 | chr3R | 18236192..18236393 | 306..507 | 980 | 99 | Plus |
chr3R | 27901430 | chr3R | 18236907..18237003 | 878..974 | 485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22418108..22419053 | 1732..2677 | 4730 | 100 | Plus |
3R | 32079331 | 3R | 22413518..22414277 | 973..1732 | 3800 | 100 | Plus |
3R | 32079331 | 3R | 22412908..22413279 | 506..877 | 1860 | 100 | Plus |
3R | 32079331 | 3R | 22411333..22411637 | 1..305 | 1525 | 100 | Plus |
3R | 32079331 | 3R | 22412649..22412850 | 306..507 | 1010 | 100 | Plus |
3R | 32079331 | 3R | 22413361..22413457 | 878..974 | 485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22158939..22159884 | 1732..2677 | 4730 | 100 | Plus |
3R | 31820162 | 3R | 22154349..22155108 | 973..1732 | 3800 | 100 | Plus |
3R | 31820162 | 3R | 22153739..22154110 | 506..877 | 1860 | 100 | Plus |
3R | 31820162 | 3R | 22152164..22152468 | 1..305 | 1525 | 100 | Plus |
3R | 31820162 | 3R | 22153480..22153681 | 306..507 | 1010 | 100 | Plus |
3R | 31820162 | 3R | 22154192..22154288 | 878..974 | 485 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
R1A1-element | 5356 | R1A1-element DMRER1DM 5356bp Derived from X51968 (g8429) (Rel. 23, Last updated, Version 1). | 660..717 | 871..811 | 118 | 68.9 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18236192..18236393 | 306..507 | 99 | -> | Plus |
chr3R | 18234868..18235172 | 1..305 | 100 | -> | Plus |
chr3R | 18236454..18236721 | 508..775 | 99 | == | Plus |
chr3R | 18236796..18236823 | 850..877 | 100 | -> | Plus |
chr3R | 18236907..18237003 | 878..974 | 100 | -> | Plus |
chr3R | 18237066..18237823 | 975..1732 | 99 | -> | Plus |
chr3R | 18241652..18242590 | 1733..2675 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsin-like-RC | 1..1950 | 253..2202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lqfR-RC | 1..1950 | 253..2202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lqfR-RC | 1..1950 | 253..2202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsin-like-RC | 1..1950 | 253..2202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lqfR-RC | 1..1950 | 253..2202 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsin-like-RC | 1..2675 | 1..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lqfR-RC | 1..2675 | 1..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lqfR-RC | 33..2707 | 1..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
epsin-like-RC | 1..2675 | 1..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
lqfR-RC | 33..2707 | 1..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22413361..22413457 | 878..974 | 100 | -> | Plus |
3R | 22411333..22411637 | 1..305 | 100 | -> | Plus |
3R | 22412649..22412850 | 306..507 | 100 | -> | Plus |
3R | 22412910..22413279 | 508..877 | 100 | -> | Plus |
3R | 22413520..22414277 | 975..1732 | 100 | -> | Plus |
3R | 22418109..22419051 | 1733..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22413361..22413457 | 878..974 | 100 | -> | Plus |
3R | 22411333..22411637 | 1..305 | 100 | -> | Plus |
3R | 22412649..22412850 | 306..507 | 100 | -> | Plus |
3R | 22412910..22413279 | 508..877 | 100 | -> | Plus |
3R | 22413520..22414277 | 975..1732 | 100 | -> | Plus |
3R | 22418109..22419051 | 1733..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22413361..22413457 | 878..974 | 100 | -> | Plus |
3R | 22411333..22411637 | 1..305 | 100 | -> | Plus |
3R | 22412649..22412850 | 306..507 | 100 | -> | Plus |
3R | 22412910..22413279 | 508..877 | 100 | -> | Plus |
3R | 22413520..22414277 | 975..1732 | 100 | -> | Plus |
3R | 22418109..22419051 | 1733..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18237055..18237359 | 1..305 | 100 | -> | Plus |
arm_3R | 18238371..18238572 | 306..507 | 100 | -> | Plus |
arm_3R | 18238632..18239001 | 508..877 | 100 | -> | Plus |
arm_3R | 18239083..18239179 | 878..974 | 100 | -> | Plus |
arm_3R | 18239242..18239999 | 975..1732 | 100 | -> | Plus |
arm_3R | 18243831..18244773 | 1733..2675 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22153480..22153681 | 306..507 | 100 | -> | Plus |
3R | 22152164..22152468 | 1..305 | 100 | -> | Plus |
3R | 22153741..22154110 | 508..877 | 100 | -> | Plus |
3R | 22154192..22154288 | 878..974 | 100 | -> | Plus |
3R | 22154351..22155108 | 975..1732 | 100 | -> | Plus |
3R | 22158940..22159882 | 1733..2675 | 100 | Plus |
Translation from 252 to 2201
> GH02671.pep MVDKFISMWKVRELADKVTNVVMNYTETEGKVREATNDDPWGPTGPLMQE LAYSTFSYETFPEVMSMLWKRMLQDNKTNWRRTYKSLLLLNYLVRNGSER VVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELIDFIQDDDRLR EERKKAKKNKDKYIGMSSDAMGMRSGGYSGYSGGSGGGGGGSGGYNDGDY RSSRGDNWYSDKSADKDRYEDDDTHYDGEREGSDSDSPSPRRNYRYNDRA SPAEVASEAKPSSLNMNIRSKTVSSPVSKQPTSTASAKPALSQKKIDLGA AANFGKPAPGGAAGIHSPTHRDTPTSVDLMGGASPSPSTSKANNNTQSNN NDLLDDLFKTCSPPPGQEKTLNSAAVIVDDDDDFNPRASDASQQEFGDFA SAFGQPSAGSTISEPPSTGLVPAANDEFADFAAFQGSTTSTSALDGNLLK TATPANDSFDLFNSAPTSTAAATTATDLLAGLGDLSIHQSMPMDNMMPPI PAVTGNNLLQPMSVTNNNNNTNGGAVPAAASVQSTAVGATWSGDLKGGKM NIDLDNLLMSKSGKPSAPAPSMNALKTNSPAKAPLNVQTGGGFPGLSPMT SPNIFGAPAPQQSIPQNQSAFANFGAFQQQQQNHSNNNNNSSSAFDLFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18447-PA | 642 | GF18447-PA | 1..642 | 1..649 | 2485 | 83.1 | Plus |
Dana\GF10652-PA | 831 | GF10652-PA | 5..203 | 11..231 | 397 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11132-PA | 632 | GG11132-PA | 1..632 | 1..649 | 3237 | 95.1 | Plus |
Dere\GG14438-PA | 829 | GG14438-PA | 5..203 | 11..231 | 392 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13377-PA | 655 | GH13377-PA | 1..655 | 1..649 | 1965 | 73.1 | Plus |
Dgri\GH20417-PA | 509 | GH20417-PA | 1..496 | 1..493 | 1780 | 80.3 | Plus |
Dgri\GH14895-PA | 796 | GH14895-PA | 5..203 | 11..231 | 398 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lqfR-PC | 649 | CG42250-PC | 1..649 | 1..649 | 3393 | 100 | Plus |
lqfR-PD | 1415 | CG42250-PD | 1..493 | 1..493 | 2578 | 100 | Plus |
lqf-PF | 640 | CG8532-PF | 5..625 | 11..635 | 405 | 25.2 | Plus |
lqf-PK | 784 | CG8532-PK | 5..638 | 11..643 | 405 | 24.8 | Plus |
lqf-PH | 784 | CG8532-PH | 5..638 | 11..643 | 405 | 24.8 | Plus |
lqf-PC | 784 | CG8532-PC | 5..638 | 11..643 | 405 | 24.8 | Plus |
lqf-PJ | 791 | CG8532-PJ | 12..645 | 11..643 | 405 | 24.8 | Plus |
lqf-PL | 630 | CG8532-PL | 5..610 | 11..622 | 401 | 25.1 | Plus |
lqf-PG | 630 | CG8532-PG | 5..610 | 11..622 | 401 | 25.1 | Plus |
lqf-PI | 637 | CG8532-PI | 12..617 | 11..622 | 401 | 25.1 | Plus |
lqf-PD | 824 | CG8532-PD | 5..610 | 11..622 | 401 | 25.1 | Plus |
lqf-PB | 824 | CG8532-PB | 5..610 | 11..622 | 401 | 25.1 | Plus |
lqf-PA | 831 | CG8532-PA | 12..617 | 11..622 | 401 | 25.1 | Plus |
lqf-PE | 831 | CG8532-PE | 12..617 | 11..622 | 401 | 25.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22384-PA | 655 | GI22384-PA | 1..655 | 1..649 | 2075 | 75.4 | Plus |
Dmoj\GI12871-PA | 807 | GI12871-PA | 5..203 | 11..231 | 398 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24213-PA | 659 | GL24213-PA | 1..659 | 1..649 | 2208 | 76 | Plus |
Dper\GL26547-PA | 832 | GL26547-PA | 5..203 | 11..231 | 400 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16061-PD | 676 | GA16061-PD | 1..676 | 1..649 | 2330 | 79.7 | Plus |
Dpse\GA16061-PC | 1428 | GA16061-PC | 1..501 | 1..493 | 1941 | 84.8 | Plus |
Dpse\GA21142-PA | 859 | GA21142-PA | 5..203 | 11..231 | 402 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM26431-PA | 632 | GM26431-PA | 1..632 | 1..649 | 3256 | 95.7 | Plus |
Dsec\GM14854-PA | 826 | GM14854-PA | 5..167 | 11..178 | 395 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20948-PA | 153 | GD20948-PA | 1..153 | 496..649 | 758 | 98.1 | Plus |
Dsim\GD14024-PA | 826 | GD14024-PA | 5..167 | 11..178 | 396 | 41.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24417-PA | 649 | GJ24417-PA | 1..649 | 1..649 | 2037 | 75.4 | Plus |
Dvir\GJ13012-PA | 797 | GJ13012-PA | 5..203 | 11..231 | 403 | 35.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13071-PA | 1565 | GK13071-PA | 1..491 | 1..493 | 1746 | 75.8 | Plus |
Dwil\GK17392-PA | 821 | GK17392-PA | 5..203 | 11..231 | 399 | 35.3 | Plus |
Dwil\GK13071-PA | 1565 | GK13071-PA | 1323..1565 | 420..649 | 344 | 51 | Plus |
Translation from 252 to 2201
> GH02671.hyp MVDKFISMWKVRELADKVTNVVMNYTETEGKVREATNDDPWGPTGPLMQE LAYSTFSYETFPEVMSMLWKRMLQDNKTNWRRTYKSLLLLNYLVRNGSER VVTSSREHIYDLRSLENYTFTDEGGKDQGINVRHKVRELIDFIQDDDRLR EERKKAKKNKDKYIGMSSDAMGMRSGGYSGYSGGSGGGGGGSGGYNDGDY RSSRGDNWYSDKSADKDRYEDDDTHYDGEREGSDSDSPSPRRNYRYNDRA SPAEVASEAKPSSLNMNIRSKTVSSPVSKQPTSTASAKPALSQKKIDLGA AANFGKPAPGGAAGIHSPTHRDTPTSVDLMGGASPSPSTSKANNNTQSNN NDLLDDLFKTCSPPPGQEKTLNSAAVIVDDDDDFNPRASDASQQEFGDFA SAFGQPSAGSTISEPPSTGLVPAANDEFADFAAFQGSTTSTSALDGNLLK TATPANDSFDLFNSAPTSTAAATTATDLLAGLGDLSIHQSMPMDNMMPPI PAVTGNNLLQPMSVTNNNNNTNGGAVPAAASVQSTAVGATWSGDLKGGKM NIDLDNLLMSKSGKPSAPAPSMNALKTNSPAKAPLNVQTGGGFPGLSPMT SPNIFGAPAPQQSIPQNQSAFANFGAFQQQQQNHSNNNNNSSSAFDLFQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
lqfR-PC | 649 | CG42250-PC | 1..649 | 1..649 | 3393 | 100 | Plus |
lqfR-PD | 1415 | CG42250-PD | 1..493 | 1..493 | 2578 | 100 | Plus |
lqf-PF | 640 | CG8532-PF | 5..625 | 11..635 | 405 | 25.2 | Plus |
lqf-PL | 630 | CG8532-PL | 5..610 | 11..622 | 401 | 25.1 | Plus |
lqf-PG | 630 | CG8532-PG | 5..610 | 11..622 | 401 | 25.1 | Plus |