BDGP Sequence Production Resources |
Search the DGRC for GH02702
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 27 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | Amun-RH |
Protein status: | GH02702.pep: gold |
Preliminary Size: | 3123 |
Sequenced Size: | 3070 |
Gene | Date | Evidence |
---|---|---|
CG2446 | 2001-01-01 | Release 2 assignment |
CG2446 | 2002-07-14 | Blastp of sequenced clone |
CG2446 | 2003-01-01 | Sim4 clustering to Release 3 |
CG2446 | 2008-04-29 | Release 5.5 accounting |
CG2446 | 2008-08-15 | Release 5.9 accounting |
CG2446 | 2008-12-18 | 5.12 accounting |
3070 bp (3070 high quality bases) assembled on 2002-07-14
GenBank Submission: BT001379
> GH02702.complete AGATAGAACGACAACTCCTGTTCCCGGTTCGTCGTCGTTCGTCATTCCCA TATTCGCTTCTCGTATTCCCTCCCATTCCCATTCGCAATCCCAATTCCCA ATTCCCGTCACACGAGTTAGCAGCACATCGCACAGCTGCATCGCTCCGCT CCGATCCTTTTTAATTTTTTGTTGTGCCTTCGGTGGCGTGCTCATTTCGA GAACAGAGTAACCCCTTTTTATTTGTCAGTTGTCAACGGCGCCCCTGCAG GCAGAAAGCAGAAACTGAAACAGCAGAGGAAGAAGAAGAAGCAGCACAGC ACGGGCACAGCACGAAGCACGCAGCACAGCACAAGCACAGAGGCGAAGCG AAGCAAAGCAAAGCAGAGGCAACACAGAAAAACAGCAAAGCATTGGAGTA GTTGTTTGGATGTGGACGGAAAGGAAGACTGGCGGCGACTAACTAAAAGT ACGTTGACAGGAGCAGCTCGGAACGGACAGGAAAAGCAGGAGACTAAACA GTAAGCAATAAATTGATTTGGCGTATAGTAGCTTACACCAAAGTACATAT ATTGCCGCATATATAGCCAGCCGGTCACTTGCGGATCAGCCAACGTCCTG GGCCCCAAGGCGATAGATACCACGATAAGGAGATACAGCGATACCACCAA TCATTAGCAGGCGACAACGACACATCCGCATCCGCAGAAGATGTCCAACG GCAAGGCGACGGTCTCGTTCTTCGAGACCGGGAGCACCAAACAGTTCGAG TACTGCTACCAGCTCTATCCCCAGGTTCTTAAGCTAAAGGCCGAGAAGCG CTGCAAGAAGCCGCAAGAGCTGATCCGCCTGGATCAGTGGTATCAGAATG AACTGCCCAAATTGATTAAGGCACGCGGCAAGGACGCGCATATGGTATAC GATGAGCTCGTCCAGTCGATGAAGTGGAAGCAGTCGCGCGGCAAATTCTA TCCGCAGCTATCCTACCTGGTCAAGGTCAACACACCGCGCGCCGTCATCC AGGAGACAAAGAAGGCCTTCCGCAAGCTGCCCAATCTGGAGCAGGCGATC ACAGCTTTATCGAACCTCAAGGGCGTTGGCACCACAATGGCCAGTGCACT GCTGGCAGCCGCAGCTCCCGATTCGGCACCATTCATGGCCGACGAGTGCC TGATGGCCATACCAGAGATCGAGGGCATCGATTACACCACCAAGGAGTAC CTCAACTTCGTCAATCACATTCAGGCCACCGTGGAGCGCCTCAATGCGGA GGTGGGCGGGGATACGCCGCACTGGTCGCCTCATCGCGTGGAGCTGGCCC TCTGGTCACACTATGTGGCCAATGATCTCAGTCCCGAGATGCTCGACGAT ATGCCGCCGCCTGGATCCGGCGCCTCCACTGGCACCGGTTCACTCAGCAC AAACGGCAACAGCAGCAAGGTGCTCGATGGCGACGATACCAACGATGGTG TGGGTGTTGATTTGGACGACGAAAGCCAAGGAGCAGGCGGTCGCAACACT GCTACAGAATCGGAGACAGAGAATGAGAACACCAACCCGGCTGCTCTGAC GCCTCTACAGTCGGGCGAGGCCAAGAACAACGCAGCTGCCGTTGGCGCCG CCCTGCAGGACGGTGACTCCAACTTTGTTTCGAACGATTCCACCTCCCAG GAGCCGATCATCGATGACAACGATGGCACCACACAGACAACGGCCACCAC TTCCACAGAGGACGGTGAGCCCATCGCCCTAGACATTGGCATTGGCATCG GTTCGAGTGGAACACCGCTCGCCTCGGACTCTGAAAGCAATCAGGAGGCG CCGCCCAAGACCAACAGCCTGCCCATCCTGACTCCCACACAGCACTCGAG CCAGAATCAGAATCAAAAGCAGTCGCCGAGCCAGCCCCACAAAACTAACA ATTCGATCACCAACAACGGTCAGCCTGCTCCTTTGGCAGAAGAGGAAGCG GTTACAGCAGCACCACAGCCAGCCAGCAAAGCGACTGCAGCACCAGCCAA TGGAAATGGTAACGGGAACGGCGTCCTGGGCGACGAGGATGAGGATGAGG CGGAGGACGAGGAGGAAGATGAGCTGGACGAGGAGGAGGATAATGAGGCG GAGCTAGAGGCTGACGAGAGCAATAGCAGCAACGGCATTGTGAGGGACAG TAAACTGCAGCAGCTGGCGGCGAACAAGGCGGTGGATGCGGTTTCACCGG TAGCAGCGGGTGCAGACTCGGCACCAGCCATTGGACAGAAGCGTACTGCC CTGCACTGCGATATGGAGCTGAAGAACGCCGGCGGAGTGGGTGTGGGCGT GGGGGAGAAGTCACCGGATCTAAAGAAACTGCGCAGCGAATGAGGCGGAG GTGAGGAAACGAAATACGGATACGGATGCGGATGCGGGTCAGAAACGGGG ATCGGTTCGGCTCGGCACGTTTCGGTTCGCCGCGTATCCGGTGGAAAGAC ATATGTATGTAGTGCAGTTGAGTCGACATAGAGACATAGAGCAACATTAC CTACACTTTACCACAACAACATTCAAGAAATTCTACTATTAAGCAACTAA CTATACATACATATAATATATTATATATATATATATATACACATATATAT ATATATATATACAACATATAACGAGATGCGAACACCCAACACACTCCACT CTCATACACACAACACAGACACACACAACCCGACATAACATGAACATAAC CGATCAGATCAGAGCGGAATATAGGATCCCGATCCAGAAGGCAGTAAGCA GCACCACAAACAACATTTCAATAGCATAGAAAGCGCGCCAAGATGAAGAA TCAGAAGAATCCGATCAAGAATCCGAAGAACAAGCAGCAGAATCAGCAGC AACAGAGAGTTCAGAATGCAGCGTTAACGTAATTTAACTAAAACGAAAAG CAAATGCATACATGAATAGTAACTACAAAACAAGATCAGATGGAAATCGA TATTTTTACACAGTCAAAAGGAACATTTAAATATAAAGAAATTTACAAAT GCCGCAGTTGCCCACTACATACAAAAAACAAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Amun.ab | 3785 | Amun.ab | 217..3286 | 1..3070 | 15215 | 99.7 | Plus |
Amun.w | 4564 | Amun.w | 1261..3883 | 448..3070 | 12980 | 99.6 | Plus |
Amun.m | 3867 | Amun.m | 564..3186 | 448..3070 | 12980 | 99.6 | Plus |
Amun.w | 4564 | Amun.w | 728..1176 | 1..449 | 2245 | 100 | Plus |
Amun.m | 3867 | Amun.m | 31..479 | 1..449 | 2245 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 11602039..11603590 | 3029..1484 | 7635 | 99.6 | Minus |
chrX | 22417052 | chrX | 11603989..11605028 | 1487..448 | 5185 | 99.9 | Minus |
chrX | 22417052 | chrX | 11605779..11606227 | 449..1 | 2245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 11710783..11712369 | 3070..1484 | 7800 | 99.4 | Minus |
X | 23542271 | X | 11712768..11713807 | 1487..448 | 5200 | 100 | Minus |
X | 23542271 | X | 11714558..11715006 | 449..1 | 2245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 11718881..11720467 | 3070..1484 | 7800 | 99.4 | Minus |
X | 23527363 | X | 11720866..11721905 | 1487..448 | 5200 | 100 | Minus |
X | 23527363 | X | 11722656..11723104 | 449..1 | 2245 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6723..6916 | 2747..2945 | 134 | 58.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 11602045..11602462 | 2612..3023 | 98 | == | Minus |
chrX | 11602523..11602983 | 2091..2551 | 100 | == | Minus |
chrX | 11603040..11603587 | 1487..2034 | 100 | <- | Minus |
chrX | 11603990..11605026 | 450..1486 | 99 | <- | Minus |
chrX | 11605779..11605835 | 393..449 | 100 | == | Minus |
chrX | 11605937..11606227 | 1..291 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2446-RC | 1..1653 | 691..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amun-RC | 1..1653 | 691..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amun-RI | 1..1653 | 691..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2446-RC | 1..1653 | 691..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amun-RL | 1..1653 | 691..2343 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2446-RD | 25..3016 | 1..2992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amun-RD | 25..3053 | 1..3029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amun-RD | 25..3053 | 1..3029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG2446-RD | 25..3016 | 1..2992 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Amun-RD | 25..3053 | 1..3029 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11710824..11712366 | 1487..3029 | 100 | <- | Minus |
X | 11712769..11713805 | 450..1486 | 100 | <- | Minus |
X | 11714558..11715006 | 1..449 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11710824..11712366 | 1487..3029 | 100 | <- | Minus |
X | 11712769..11713805 | 450..1486 | 100 | <- | Minus |
X | 11714558..11715006 | 1..449 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11710824..11712366 | 1487..3029 | 100 | <- | Minus |
X | 11712769..11713805 | 450..1486 | 100 | <- | Minus |
X | 11714558..11715006 | 1..449 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 11604857..11606399 | 1487..3029 | 100 | <- | Minus |
arm_X | 11606802..11607838 | 450..1486 | 100 | <- | Minus |
arm_X | 11608591..11609039 | 1..449 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11718922..11720464 | 1487..3029 | 100 | <- | Minus |
X | 11720867..11721903 | 450..1486 | 100 | <- | Minus |
X | 11722656..11723104 | 1..449 | 100 | Minus |
Translation from 690 to 2342
> GH02702.hyp MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQELIRLDQW YQNELPKLIKARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPR AVIQETKKAFRKLPNLEQAITALSNLKGVGTTMASALLAAAAPDSAPFMA DECLMAIPEIEGIDYTTKEYLNFVNHIQATVERLNAEVGGDTPHWSPHRV ELALWSHYVANDLSPEMLDDMPPPGSGASTGTGSLSTNGNSSKVLDGDDT NDGVGVDLDDESQGAGGRNTATESETENENTNPAALTPLQSGEAKNNAAA VGAALQDGDSNFVSNDSTSQEPIIDDNDGTTQTTATTSTEDGEPIALDIG IGIGSSGTPLASDSESNQEAPPKTNSLPILTPTQHSSQNQNQKQSPSQPH KTNNSITNNGQPAPLAEEEAVTAAPQPASKATAAPANGNGNGNGVLGDED EDEAEDEEEDELDEEEDNEAELEADESNSSNGIVRDSKLQQLAANKAVDA VSPVAAGADSAPAIGQKRTALHCDMELKNAGGVGVGVGEKSPDLKKLRSE *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Amun-PK | 550 | CG2446-PK | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PJ | 550 | CG2446-PJ | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PL | 550 | CG2446-PL | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PI | 550 | CG2446-PI | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PH | 550 | CG2446-PH | 1..550 | 1..550 | 2836 | 100 | Plus |
Translation from 690 to 2342
> GH02702.pep MSNGKATVSFFETGSTKQFEYCYQLYPQVLKLKAEKRCKKPQELIRLDQW YQNELPKLIKARGKDAHMVYDELVQSMKWKQSRGKFYPQLSYLVKVNTPR AVIQETKKAFRKLPNLEQAITALSNLKGVGTTMASALLAAAAPDSAPFMA DECLMAIPEIEGIDYTTKEYLNFVNHIQATVERLNAEVGGDTPHWSPHRV ELALWSHYVANDLSPEMLDDMPPPGSGASTGTGSLSTNGNSSKVLDGDDT NDGVGVDLDDESQGAGGRNTATESETENENTNPAALTPLQSGEAKNNAAA VGAALQDGDSNFVSNDSTSQEPIIDDNDGTTQTTATTSTEDGEPIALDIG IGIGSSGTPLASDSESNQEAPPKTNSLPILTPTQHSSQNQNQKQSPSQPH KTNNSITNNGQPAPLAEEEAVTAAPQPASKATAAPANGNGNGNGVLGDED EDEAEDEEEDELDEEEDNEAELEADESNSSNGIVRDSKLQQLAANKAVDA VSPVAAGADSAPAIGQKRTALHCDMELKNAGGVGVGVGEKSPDLKKLRSE *
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF21437-PA | 587 | GF21437-PA | 1..587 | 1..550 | 1712 | 70.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18840-PA | 548 | GG18840-PA | 1..548 | 1..550 | 2344 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH24559-PA | 570 | GH24559-PA | 1..383 | 1..374 | 1507 | 76.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Amun-PK | 550 | CG2446-PK | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PJ | 550 | CG2446-PJ | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PL | 550 | CG2446-PL | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PI | 550 | CG2446-PI | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PH | 550 | CG2446-PH | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PG | 550 | CG2446-PG | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PF | 550 | CG2446-PF | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PA | 550 | CG2446-PA | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PE | 550 | CG2446-PE | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PC | 550 | CG2446-PC | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PD | 550 | CG2446-PD | 1..550 | 1..550 | 2836 | 100 | Plus |
Amun-PB | 550 | CG2446-PB | 1..550 | 1..550 | 2836 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16319-PA | 587 | GI16319-PA | 1..378 | 1..374 | 1525 | 78.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL15233-PA | 468 | GL15233-PA | 1..277 | 1..283 | 1349 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA15368-PA | 552 | GA15368-PA | 1..552 | 1..550 | 1839 | 74.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM13052-PA | 549 | GM13052-PA | 1..549 | 1..550 | 2840 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15978-PA | 549 | GD15978-PA | 1..549 | 1..550 | 2840 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15659-PA | 578 | GJ15659-PA | 1..388 | 1..374 | 1492 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19790-PA | 568 | GK19790-PA | 1..416 | 1..411 | 1579 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17605-PA | 550 | GE17605-PA | 1..550 | 1..550 | 2362 | 95.5 | Plus |