BDGP Sequence Production Resources |
Search the DGRC for GH02722
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 27 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | CG12123-RA |
Protein status: | GH02722.pep: gold |
Preliminary Size: | 1209 |
Sequenced Size: | 1081 |
Gene | Date | Evidence |
---|---|---|
CG12123 | 2001-01-01 | Release 2 assignment |
CG12123 | 2001-11-09 | Blastp of sequenced clone |
CG12123 | 2003-01-01 | Sim4 clustering to Release 3 |
CG12123 | 2008-04-29 | Release 5.5 accounting |
CG12123 | 2008-08-15 | Release 5.9 accounting |
CG12123 | 2008-12-18 | 5.12 accounting |
1081 bp (1081 high quality bases) assembled on 2001-11-09
GenBank Submission: AY069038
> GH02722.complete CGGTGGCCACACTTTTGTTATTAACATTTCTGTTCAACAAAAACATTAAT AAACATTAGTAAAAGTGCAATTGTTAGTGCAATAAAGACAGTTCATATAC AGAAACGTAGTCGAGAGCAGCTGGTGACCTCCACCGGTGACATAGTAGCC TGTGCAATTTAACTAATAAGATTAGGATTTACTTAGTATCTTTTTTTTTT AAATTTAACGCTTCCGATGTCGGATTCGCTGATCATTTGCGTTTCCGACT ACTGGCGGCGATGTCATTACCACAATCGTCAAAATCGTGAAGCCGGCGAC GCCTGGCCAGAAGCCAAACCGCTGCGGAGGCTGTGCATCGATGTGGACGC CATCAATGGTAATTACTATCTTCGCGAGTTCCTGCACCAGCACGTGCTTG CCCAGAGCCTTATGCACAATCATGGTGTCCAGCTGGTCTGGCTGCAATTC GAGGAACCGGAGAAGCACACCATTGACTACAAATTCGCCGACATGCTGGC ACACACGCTGTGGGAGCGCATCGAGGTGGAGCACCTCATGTCCTGGCTGT CCACACTGGGCGGCGGATTCTCCGCCCTTGGCGAGCAGTTCGAGCGATGT GCGAAAACGGCTGGCAAGATTTCGCTGCAGCAGTTAAAGATTGGCATGCG ACTCGGTGATCCCTTCCTGCAGACGCGCTGCAAGCTCTACTACAGCATTT CGCTAATCCAGCGTGGTCAACTACGGATGGCGAAGCATTTGATCCGACAG CAGTATAAGTTTGCGAGTAGAAACATCGAGAAGGATGTGCGCCTGATGCG GATGTGTCTGGGCATTTGGCGGCGACTTAGCTACGAGTACGAGCAGCGAA GACTGCGGAAAGGTGGCAACTAAGTTGGACTTGGAACCGCAGATTATTTC GATCAAAAAACTAAAAATTGTAAATTGCATTAGGTGGTCACGATTCGAGC GTCGATCGTGTTTTTTTTCCTCTTTTGTTAAGCAAAAGTCAAATATAGTT TTCAATTTATTTATTTAATATGTAATTGTATATACGTAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12123-RA | 1050 | CG12123-RA | 14..1050 | 1..1037 | 5185 | 100 | Plus |
CG1440.a | 2281 | CG1440.a | 2244..2281 | 1043..1006 | 190 | 100 | Minus |
CG1440-RC | 2382 | CG1440-RC | 2345..2382 | 1043..1006 | 190 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
copia | 5143 | copia DMCOPIA 5143bp Derived from X02599 (g7740) (Rel. 49, Last updated, Version 4). | 207..259 | 984..1034 | 116 | 71.7 | Plus |
17.6 | 7439 | 17.6 DMIS176 7439bp AKA(J01060,J01061) Derived from X01472 (g8142) (Rel. 36, Last updated, Version 2). | 969..1049 | 1032..955 | 109 | 63 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 8332993..8333430 | 601..1037 | 99 | <- | Minus |
chrX | 8333489..8334088 | 1..600 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 1..657 | 217..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 1..657 | 217..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 1..657 | 217..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 1..657 | 217..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 1..657 | 217..873 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 1..1037 | 1..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 1..1037 | 1..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 8..1044 | 1..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 1..1037 | 1..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG12123-RA | 8..1044 | 1..1037 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8441247..8441683 | 601..1037 | 100 | <- | Minus |
X | 8441742..8442341 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8441247..8441683 | 601..1037 | 100 | <- | Minus |
X | 8441742..8442341 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8441247..8441683 | 601..1037 | 100 | <- | Minus |
X | 8441742..8442341 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 8335280..8335716 | 601..1037 | 100 | <- | Minus |
arm_X | 8335775..8336374 | 1..600 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 8449345..8449781 | 601..1037 | 100 | <- | Minus |
X | 8449840..8450439 | 1..600 | 100 | Minus |
Translation from 216 to 872
> GH02722.hyp MSDSLIICVSDYWRRCHYHNRQNREAGDAWPEAKPLRRLCIDVDAINGNY YLREFLHQHVLAQSLMHNHGVQLVWLQFEEPEKHTIDYKFADMLAHTLWE RIEVEHLMSWLSTLGGGFSALGEQFERCAKTAGKISLQQLKIGMRLGDPF LQTRCKLYYSISLIQRGQLRMAKHLIRQQYKFASRNIEKDVRLMRMCLGI WRRLSYEYEQRRLRKGGN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12123-PA | 218 | CG12123-PA | 1..218 | 1..218 | 1174 | 100 | Plus |
Translation from 216 to 872
> GH02722.pep MSDSLIICVSDYWRRCHYHNRQNREAGDAWPEAKPLRRLCIDVDAINGNY YLREFLHQHVLAQSLMHNHGVQLVWLQFEEPEKHTIDYKFADMLAHTLWE RIEVEHLMSWLSTLGGGFSALGEQFERCAKTAGKISLQQLKIGMRLGDPF LQTRCKLYYSISLIQRGQLRMAKHLIRQQYKFASRNIEKDVRLMRMCLGI WRRLSYEYEQRRLRKGGN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22585-PA | 220 | GF22585-PA | 1..215 | 1..215 | 863 | 76.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG19052-PA | 218 | GG19052-PA | 1..218 | 1..218 | 994 | 86.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12506-PA | 217 | GH12506-PA | 2..215 | 4..215 | 716 | 65.4 | Plus |
Dgri\GH11788-PA | 228 | GH11788-PA | 3..221 | 5..215 | 630 | 56.6 | Plus |
Dgri\GH16878-PA | 228 | GH16878-PA | 3..221 | 5..215 | 621 | 56.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG12123-PA | 218 | CG12123-PA | 1..218 | 1..218 | 1174 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14859-PA | 224 | GI14859-PA | 2..217 | 4..215 | 760 | 67.1 | Plus |
Dmoj\GI12021-PA | 232 | GI12021-PA | 2..219 | 4..212 | 679 | 60.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20249-PA | 242 | GL20249-PA | 1..226 | 1..214 | 791 | 69.5 | Plus |
Dper\GL19744-PA | 226 | GL19744-PA | 1..213 | 1..214 | 716 | 65.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26966-PA | 242 | GA26966-PA | 1..226 | 1..214 | 798 | 69 | Plus |
Dpse\GA28923-PA | 226 | GA28923-PA | 1..213 | 1..214 | 720 | 66.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM21366-PA | 218 | GM21366-PA | 1..218 | 1..218 | 1086 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16118-PA | 218 | GD16118-PA | 1..218 | 1..218 | 1081 | 91.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ19522-PA | 223 | GJ19522-PA | 2..216 | 4..215 | 742 | 68.4 | Plus |
Dvir\GJ13291-PA | 228 | GJ13291-PA | 3..222 | 5..215 | 642 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19894-PA | 229 | GK19894-PA | 1..219 | 5..211 | 692 | 61.5 | Plus |
Dwil\GK24491-PA | 247 | GK24491-PA | 1..216 | 5..211 | 656 | 57.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE17456-PA | 218 | GE17456-PA | 1..218 | 1..218 | 1002 | 85.8 | Plus |