BDGP Sequence Production Resources |
Search the DGRC for GH02759
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 27 |
Well: | 59 |
Vector: | pOT2 |
Associated Gene/Transcript | Sod2-RA |
Protein status: | GH02759.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 911 |
Gene | Date | Evidence |
---|---|---|
CG8905 | 2001-01-01 | Release 2 assignment |
CG8905 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8905 | 2003-02-17 | Blastp of sequenced clone |
Sod2 | 2008-04-29 | Release 5.5 accounting |
Sod2 | 2008-08-15 | Release 5.9 accounting |
Sod2 | 2008-12-18 | 5.12 accounting |
911 bp (911 high quality bases) assembled on 2003-02-17
GenBank Submission: BT004505
> GH02759.complete ATCTCTAGCAGTAAATTGTTCAAATAGAACAAGCGAAATAACGAGAACGT AAGCCTTGTTTTATTTGATATAAAATCTGATATCGGGACTTAGCCTTATT AGCAGTCGAATAAAACGCAGATATGTTCGTGGCCCGTAAAATTTCGCAAA CTGCAAGCCTGGCGGTGCGTGGCAAGCACACCCTACCGAAGCTGCCCTAC GACTATGCCGCCCTGGAGCCTATCATCTGCCGGGAGATCATGGAGCTGCA TCACCAGAAGCACCACCAGACCTACGTCAACAATCTAAATGCCGCCGAGG AGCAGCTGGAGGAGGCCAAGTCGAAGAGCGACACCACCAAGCTGATTCAG CTGGCTCCTGCCCTGCGTTTCAATGGCGGTGGCCACATCAACCACACCAT CTTCTGGCAGAACCTCTCGCCCAACAAGACCCAGCCCAGCGATGATCTGA AGAAGGCCATCGAGTCGCAGTGGAAGAGCCTCGAGGAGTTCAAAAAGGAG CTGACCACGCTGACCGTGGCGGTCCAGGGCTCCGGCTGGGGCTGGCTGGG CTTCAACAAGAAGTCGGGCAAACTGCAACTGGCCGCCCTGCCCAACCAGG ATCCCCTGGAGGCCTCCACCGGCCTGATCCCGCTCTTCGGCATCGATGTC TGGGAGCACGCCTACTATCTGCAGTACAAGAACGTGCGTCCCTCCTACGT GGAGGCCATCTGGGACATCGCCAACTGGGATGACATCTCGTGCCGCTTCC AGGAGGCCAAGAAGCTCGGTTGCTAAGCACAGCCGGCGATTGCGTATGTT TAATCTATAAGCATCTGCGGATCGGAGATCCTAAATTGTAGTCTAAGTTG CGGCTAATAAATTGGTACCAGCTAGCAACTAAAAAAAAAAAAAAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sod2-RA | 1072 | Sod2-RA | 42..923 | 1..882 | 4410 | 100 | Plus |
Sod2.a | 920 | Sod2.a | 90..869 | 103..882 | 3900 | 100 | Plus |
Sod2.b | 795 | Sod2.b | 73..795 | 158..880 | 3615 | 100 | Plus |
Sod2.a | 920 | Sod2.a | 42..89 | 1..48 | 240 | 100 | Plus |
Sod2.b | 795 | Sod2.b | 25..72 | 1..48 | 240 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 12660965..12661121 | 1..157 | 100 | Minus | |
chr2R | 12660126..12660848 | 158..880 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 1..654 | 123..776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 1..654 | 123..776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 1..654 | 123..776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 1..654 | 123..776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 1..654 | 123..776 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 1..877 | 4..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 25..904 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 5..884 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 1..877 | 4..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Sod2-RA | 5..884 | 1..880 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16772916..16773638 | 158..880 | 100 | <- | Minus |
2R | 16773755..16773911 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16772916..16773638 | 158..880 | 100 | <- | Minus |
2R | 16773755..16773911 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16772916..16773638 | 158..880 | 100 | <- | Minus |
2R | 16773755..16773911 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 12660421..12661143 | 158..880 | 100 | <- | Minus |
arm_2R | 12661260..12661416 | 1..157 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 16774115..16774837 | 158..880 | 100 | <- | Minus |
2R | 16774954..16775110 | 1..157 | 100 | Minus |
Translation from 122 to 775
> GH02759.hyp MFVARKISQTASLAVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQT YVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLSP NKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGK LQLAALPNQDPLEASTGLIPLFGIDVWEHAYYLQYKNVRPSYVEAIWDIA NWDDISCRFQEAKKLGC*
Translation from 122 to 775
> GH02759.pep MFVARKISQTASLAVRGKHTLPKLPYDYAALEPIICREIMELHHQKHHQT YVNNLNAAEEQLEEAKSKSDTTKLIQLAPALRFNGGGHINHTIFWQNLSP NKTQPSDDLKKAIESQWKSLEEFKKELTTLTVAVQGSGWGWLGFNKKSGK LQLAALPNQDPLEASTGLIPLFGIDVWEHAYYLQYKNVRPSYVEAIWDIA NWDDISCRFQEAKKLGC*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF13446-PA | 208 | GF13446-PA | 1..208 | 1..217 | 1038 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22242-PA | 217 | GG22242-PA | 1..217 | 1..217 | 1149 | 98.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH22701-PA | 215 | GH22701-PA | 1..214 | 1..215 | 1047 | 89.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sod2-PB | 217 | CG8905-PB | 1..217 | 1..217 | 1159 | 100 | Plus |
Sod2-PA | 217 | CG8905-PA | 1..217 | 1..217 | 1159 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18488-PA | 217 | GI18488-PA | 1..216 | 1..215 | 1059 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL11797-PA | 218 | GL11797-PA | 1..216 | 1..215 | 1049 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21401-PB | 218 | GA21401-PB | 1..216 | 1..215 | 1051 | 88.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20031-PA | 217 | GM20031-PA | 1..217 | 1..217 | 1157 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25515-PA | 217 | GD25515-PA | 1..217 | 1..217 | 1157 | 99.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ21350-PA | 217 | GJ21350-PA | 1..217 | 1..216 | 1028 | 86.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15671-PA | 217 | GK15671-PA | 1..215 | 1..215 | 1046 | 87.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Sod2-PA | 217 | GE14035-PA | 1..217 | 1..217 | 1144 | 97.2 | Plus |