BDGP Sequence Production Resources |
Search the DGRC for GH02773
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 27 |
Well: | 73 |
Vector: | pOT2 |
Associated Gene/Transcript | Reg-2-RA |
Protein status: | GH02773.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 890 |
Gene | Date | Evidence |
---|---|---|
CG3200 | 2001-01-01 | Release 2 assignment |
CG3200 | 2002-06-13 | Blastp of sequenced clone |
CG3200 | 2003-01-01 | Sim4 clustering to Release 3 |
Reg-2 | 2008-04-29 | Release 5.5 accounting |
Reg-2 | 2008-08-15 | Release 5.9 accounting |
Reg-2 | 2008-12-18 | 5.12 accounting |
890 bp (890 high quality bases) assembled on 2002-06-13
GenBank Submission: AY122086
> GH02773.complete TTCGACGAGAGTCGAAAGTCAAGAGTTCTCGAGCGGCATTTCAGAGATTT CAGGCAAAATGCGCAGCCTCAGCCGCTTTCGCCTCATAACCTTCGATGTG ACCAACACTCTGCTCCAATTCCGAACCACTCCCGGCAAGCAGTACGGCGA GATTGGAGCCCTGTTCGGAGCCCGATGCGACAACAACGAGCTGGCCAAGA ACTTCAAGGCCAACTGGTACAAGATGAACCGCGATTATCCCAACTTTGGG CGCGACACGAATCCCCAGATGGAATGGCAGCAATGGTGGCGTAAGCTGAT AGCAGGAACTTTTGCGGAGAGTGGAGCGGCCATTCCCGACGAGAAGCTGC ACAACTTCTCCAACCACCTAATTGAGCTATACAAAACCTCCATTTGCTGG CAGCCATGCAACGGCAGCGTGGAACTCCTTCAGCAGCTCCGCAAGGAGTT GAAGCCGGAGAAGTGCAAGCTGGGTGTGATAGCCAACTTCGATCCTCGGC TGCCGACTCTGCTGCAGAACACCAAGCTGGATCAGTACCTGGACTTTGCA ATTAACTCGTACGAGGTGCAGGCCGAGAAGCCCGACCCCCAAATCTTTCA AAAGGCAATGGAGAAGTCGGGTCTGAAGAACCTCAAGCCGGAGGAGTGCC TTCACATTGGGGATGGTCCCACCACTGATTATCTGGCCGCCAAGGAACTG GGCTGGCACTCGGCGCTGGTGCACGAGAAGAGCTACGCATATCTGGTCAA GAAATACGGCGAGGACATCGATCGAGATCATGTCTTCCCCAGTCTCTACG ACTTCCACAAAAAGATCTCCGACGGCGCAGTTGTCTGGTGATTGATTGTG CACACATTAAATTAGTAACACCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Reg-2-RA | 1232 | Reg-2-RA | 236..1109 | 1..874 | 4370 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 605009..605576 | 869..302 | 2750 | 98.9 | Minus |
chr3L | 24539361 | chr3L | 606185..606403 | 219..1 | 1035 | 98.2 | Minus |
chr3L | 24539361 | chr3L | 606041..606131 | 306..216 | 455 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 605006..605572 | 306..872 | 98 | <- | Minus |
chr3L | 606042..606130 | 217..305 | 100 | <- | Minus |
chr3L | 606188..606403 | 1..216 | 98 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 1..783 | 59..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 1..783 | 59..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 1..783 | 59..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 1..783 | 59..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 1..783 | 59..841 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 1..872 | 1..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 12..883 | 1..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 12..883 | 1..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 1..872 | 1..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Reg-2-RA | 12..883 | 1..872 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 605165..605731 | 306..872 | 100 | <- | Minus |
3L | 606197..606285 | 217..305 | 100 | <- | Minus |
3L | 606343..606558 | 1..216 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 605165..605731 | 306..872 | 100 | <- | Minus |
3L | 606197..606285 | 217..305 | 100 | <- | Minus |
3L | 606343..606558 | 1..216 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 605165..605731 | 306..872 | 100 | <- | Minus |
3L | 606197..606285 | 217..305 | 100 | <- | Minus |
3L | 606343..606558 | 1..216 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 605165..605731 | 306..872 | 100 | <- | Minus |
arm_3L | 606197..606285 | 217..305 | 100 | <- | Minus |
arm_3L | 606343..606558 | 1..216 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 605165..605731 | 306..872 | 100 | <- | Minus |
3L | 606197..606285 | 217..305 | 100 | <- | Minus |
3L | 606343..606558 | 1..216 | 100 | Minus |
Translation from 1 to 840
> GH02773.hyp STRVESQEFSSGISEISGKMRSLSRFRLITFDVTNTLLQFRTTPGKQYGE IGALFGARCDNNELAKNFKANWYKMNRDYPNFGRDTNPQMEWQQWWRKLI AGTFAESGAAIPDEKLHNFSNHLIELYKTSICWQPCNGSVELLQQLRKEL KPEKCKLGVIANFDPRLPTLLQNTKLDQYLDFAINSYEVQAEKPDPQIFQ KAMEKSGLKNLKPEECLHIGDGPTTDYLAAKELGWHSALVHEKSYAYLVK KYGEDIDRDHVFPSLYDFHKKISDGAVVW*
Translation from 58 to 840
> GH02773.pep MRSLSRFRLITFDVTNTLLQFRTTPGKQYGEIGALFGARCDNNELAKNFK ANWYKMNRDYPNFGRDTNPQMEWQQWWRKLIAGTFAESGAAIPDEKLHNF SNHLIELYKTSICWQPCNGSVELLQQLRKELKPEKCKLGVIANFDPRLPT LLQNTKLDQYLDFAINSYEVQAEKPDPQIFQKAMEKSGLKNLKPEECLHI GDGPTTDYLAAKELGWHSALVHEKSYAYLVKKYGEDIDRDHVFPSLYDFH KKISDGAVVW*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF10059-PA | 260 | GF10059-PA | 1..260 | 1..260 | 1291 | 89.6 | Plus |
Dana\GF19357-PA | 249 | GF19357-PA | 8..249 | 1..260 | 407 | 34.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14654-PA | 260 | GG14654-PA | 1..260 | 1..260 | 1360 | 95.8 | Plus |
Dere\GG18712-PA | 246 | GG18712-PA | 10..220 | 3..221 | 369 | 36.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16592-PA | 262 | GH16592-PA | 1..262 | 1..260 | 1106 | 74.4 | Plus |
Dgri\GH17703-PA | 252 | GH17703-PA | 8..252 | 1..260 | 428 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Reg-2-PA | 260 | CG3200-PA | 1..260 | 1..260 | 1412 | 100 | Plus |
CG15912-PA | 246 | CG15912-PA | 10..246 | 3..260 | 366 | 34 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI12439-PA | 261 | GI12439-PA | 1..261 | 1..260 | 1174 | 82 | Plus |
Dmoj\GI16110-PA | 262 | GI16110-PA | 8..262 | 1..260 | 416 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL20848-PA | 260 | GL20848-PA | 1..260 | 1..260 | 1303 | 90.8 | Plus |
Dper\GL20262-PA | 251 | GL20262-PA | 8..223 | 1..224 | 430 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA16604-PA | 260 | GA16604-PA | 1..260 | 1..260 | 1303 | 90.8 | Plus |
Dpse\GA14022-PA | 251 | GA14022-PA | 8..223 | 1..224 | 430 | 39.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14270-PA | 260 | GM14270-PA | 1..260 | 1..260 | 1385 | 98.1 | Plus |
Dsec\GM12350-PA | 246 | GM12350-PA | 10..246 | 3..260 | 377 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13525-PA | 205 | GD13525-PA | 1..205 | 56..260 | 1088 | 97.6 | Plus |
Dsim\GD16695-PA | 246 | GD16695-PA | 10..246 | 3..260 | 373 | 33.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12337-PA | 261 | GJ12337-PA | 1..261 | 1..260 | 1180 | 81.2 | Plus |
Dvir\GJ15763-PA | 251 | GJ15763-PA | 8..251 | 1..260 | 424 | 34.9 | Plus |