BDGP Sequence Production Resources |
Search the DGRC for GH02822
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 28 |
Well: | 22 |
Vector: | pOT2 |
Associated Gene/Transcript | TM9SF4-RA |
Protein status: | GH02822.pep: gold |
Preliminary Size: | 174 |
Sequenced Size: | 2441 |
Gene | Date | Evidence |
---|---|---|
CG7364 | 2001-01-01 | Release 2 assignment |
CG16861 | 2001-01-01 | Release 2 assignment |
CG7364 | 2001-09-19 | Blastp of sequenced clone |
CG7364 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7364 | 2008-04-29 | Release 5.5 accounting |
CG7364 | 2008-08-15 | Release 5.9 accounting |
CG7364 | 2008-12-18 | 5.12 accounting |
2441 bp (2441 high quality bases) assembled on 2001-09-19
GenBank Submission: AY058275
> GH02822.complete AATTGCCAGCAGGGAGACGCAGAAACTACATTATATATACAAAATATATA GTTTCTAGCGGAATTTCTGCCAACAAAAGGGGTCCAGTGGTTACTTCACT AGCACTCCCACACACCACCAACAATGCAGTCCGGGGCTCTGGCTAGGCCA TGTCTGGCGATAGTCCTGCTGGCGGGCGTCGTCCTGGTGGCCGACTCCTT CTACGTGCCCGGCGTGGCGCCGGTGGAGTTCGTACAAGACCAAAAGATCG ACGTGAAAGCCGTGAAGATGACTAGCAGCCGCACCCAGCTGCCATATCAG TACTACTCTCTTAGGTTCTGCTATCCCAAGAATGGCACGCTCATCTTTAA GTCAGAGAATTTGGGTGAAGTTCTGCGCGGCGACCGAATCGTCAATACGC CTTACGAGGTGCGGATGAACCAGCAGGTCAACTGCCGGCTGTTGTGCAAC CAGAAGGACAGACCGCTCACTTGGAGTAAAGAGGACTCCGCACTGGTTGC GGAGCGCATCCAGCACGAGTACTTTGTGCATCTGCTCGTGGACAATCTGC CGGTGGCCACGCGCATCGTCAGCGTTAACAATCCCGCGGAGGTGACCTAC GAGCACGGGTATCGTCTAGGCCAAGTGGACGGGGACAACATCTACATCAA TAACCACCTGAAGTTTATCCTATCCTACCACATGCACTCCAAGGATAAGT ATCGTGTGGTTGGCTTTGAGGTGGAAACCGTTTCGGTCAGTCACAAAGAG CTGAAATTCCATGGGGACACCTGCAACTTCCCAGACAGCGCCCGACCGCA GCTGGTCAATCCGAACGGAGAGACGCAGCTATATTTCACGTACTCTGTGG AGTGGAAGGAGTCCAAGGTGAGCTGGGCCTCACGATGGGACATCTACCTT GGCATGCGCGATGTCCAGATCCATTGGTTCAGCATCATCAACTCGCTAGT GGTGGTCTTCTTCCTGTCTGGCATTCTCACTATGATTATGATTCGCACCC TGCGTCGAGACATTGCCCGCTACAATACGGATGACAATATTGAAGATACA TTGGAGGAGACCGGTTGGAAGCTTGTGCATGGAGACGTATTCCGTCCGCC CAAGAATACTAGGCTGTTTTCCGCGATTATCGGCAGTGGCATTCAGATCT TCTTTATGGCCCTCATCACCATCTTCTTTGCCATGTTGGGCATGCTGTCG CCATCGTCGCGTGGCGCGCTCATGACCTCGGGCATTTTTATGTACGTTTT CATGGGCACTATTGCAGGATACTATGCTGCCCGTCTCTACAAAACAATGA AGGGTCGCGAGTGGAAGCGGGCCGCCTTTCTCACCGCTACTCTGTATCCA GGCATTGTCTTTGGCACTGGATTCTTCTTGAACTTTTTTATTTGGGACAA GTCGTCTAGCGGTGCCGTTCCCTTTACCACCATGATCTCACTGCTGCTGC TATGGTTTGGCATCTCTGTGCCCCTGGTCTACCTGGGCTTTTATTTGGGA TACCGCAAGCAACCCTACCAGCATCCAGTGCGAACCAATATGATTCCGCG ACAAGTGCCCACACAGCACTGGTACATGAATGCGGTTTTAAGCACTCTGA TGGCGGGCATCTTGCCCTTTGGCGCCGTCTTCATTGAACTCTTCTTTGTG TTCACGGCCATCTGGCAGAATCAGTTCTACTACCTGTTTGGCTTTCTATT CTTGGTGTTTTGCATCTTAGTCGTAAGCTGTGCCCAGATCTCTATAGTAA TGACTTATTTCCAGCTCTGCGGTGAGGACTACCGCTGGTGGTGGCGCAGT TTTGTTGTGTCTGGCGGCTCGGCTGTTTATGTACTTTTTTATAGCATCTT CTACTTTTTCACAAAGCTGGAGATCACAGAGTTCATACCGACGCTGCTCT ACCTGGGCTATACGGGTCTTATGGTGCTCACATTTTGGCTGCTAACTGGC TCGATTGGCTTCTTCGCCGCCTACGTTTTCATTCTAAGAATCTACGGAGC TGTGAAGATCGACTAAGCTGTGTCACCCACTCGTCACGCTGTACACCAAA CTATCCTTGCAATATCATTCGATCATAAATATATTTATAGAGCAACTGAA CCCAGTCTCGTCCAGCTGCAGAAATCAATATAAACAAAACGGAAACTAAG CGAAAACTCGACGACTCAGCCATGTGAGCTAACTTCCCCTTCTTGTCCCC AGCTGCAGAAAGTCACCCACTAAGTAACCATTTACTAAGTCAAAACGCTA AATTCAGCAAGTACGTTTTGGAACCCCGGAAGTGACTCGATTTGCAGGAG CGTGAGCGTTGCGTTTTAGAATCAATCTAGAAATGCCTAATTTATATATG TATGTAAAGAATCTAATCTAAGCAACTGATATAAAACAAACAAAAATCAA ATAAACTAAGCTTAATGTACGACAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 13770046..13771283 | 127..1364 | 6190 | 100 | Plus |
chr2L | 23010047 | chr2L | 13772094..13772602 | 1915..2423 | 2545 | 100 | Plus |
chr2L | 23010047 | chr2L | 13771352..13771580 | 1364..1592 | 1145 | 100 | Plus |
chr2L | 23010047 | chr2L | 13771643..13771829 | 1591..1777 | 935 | 100 | Plus |
chr2L | 23010047 | chr2L | 13771894..13772036 | 1775..1917 | 715 | 100 | Plus |
chr2L | 23010047 | chr2L | 13769830..13769958 | 1..129 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13771334..13772571 | 127..1364 | 6190 | 100 | Plus |
2L | 23513712 | 2L | 13773382..13773891 | 1915..2424 | 2550 | 100 | Plus |
2L | 23513712 | 2L | 13772640..13772868 | 1364..1592 | 1145 | 100 | Plus |
2L | 23513712 | 2L | 13772931..13773117 | 1591..1777 | 935 | 100 | Plus |
2L | 23513712 | 2L | 13773182..13773324 | 1775..1917 | 715 | 100 | Plus |
2L | 23513712 | 2L | 13771118..13771246 | 1..129 | 645 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 13771334..13772571 | 127..1364 | 6190 | 100 | Plus |
2L | 23513712 | 2L | 13773382..13773891 | 1915..2424 | 2550 | 100 | Plus |
2L | 23513712 | 2L | 13772640..13772868 | 1364..1592 | 1145 | 100 | Plus |
2L | 23513712 | 2L | 13772931..13773117 | 1591..1777 | 935 | 100 | Plus |
2L | 23513712 | 2L | 13773182..13773324 | 1775..1917 | 715 | 100 | Plus |
2L | 23513712 | 2L | 13771118..13771246 | 1..129 | 645 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 13769830..13769958 | 1..129 | 100 | -> | Plus |
chr2L | 13770049..13771283 | 130..1364 | 100 | -> | Plus |
chr2L | 13771353..13771580 | 1365..1592 | 100 | -> | Plus |
chr2L | 13771645..13771828 | 1593..1776 | 100 | -> | Plus |
chr2L | 13771896..13772034 | 1777..1915 | 100 | -> | Plus |
chr2L | 13772095..13772602 | 1916..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7364-RA | 1..1893 | 124..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TM9SF4-RA | 1..1893 | 124..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TM9SF4-RA | 1..1893 | 124..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7364-RA | 1..1893 | 124..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TM9SF4-RA | 1..1893 | 124..2016 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7364-RA | 32..2454 | 1..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TM9SF4-RA | 32..2454 | 1..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TM9SF4-RA | 24..2446 | 1..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7364-RA | 32..2454 | 1..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
TM9SF4-RA | 24..2446 | 1..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13771118..13771246 | 1..129 | 100 | -> | Plus |
2L | 13771337..13772571 | 130..1364 | 100 | -> | Plus |
2L | 13772641..13772868 | 1365..1592 | 100 | -> | Plus |
2L | 13772933..13773116 | 1593..1776 | 100 | -> | Plus |
2L | 13773184..13773322 | 1777..1915 | 100 | -> | Plus |
2L | 13773383..13773890 | 1916..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13771118..13771246 | 1..129 | 100 | -> | Plus |
2L | 13771337..13772571 | 130..1364 | 100 | -> | Plus |
2L | 13772641..13772868 | 1365..1592 | 100 | -> | Plus |
2L | 13772933..13773116 | 1593..1776 | 100 | -> | Plus |
2L | 13773184..13773322 | 1777..1915 | 100 | -> | Plus |
2L | 13773383..13773890 | 1916..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13771118..13771246 | 1..129 | 100 | -> | Plus |
2L | 13771337..13772571 | 130..1364 | 100 | -> | Plus |
2L | 13772641..13772868 | 1365..1592 | 100 | -> | Plus |
2L | 13772933..13773116 | 1593..1776 | 100 | -> | Plus |
2L | 13773184..13773322 | 1777..1915 | 100 | -> | Plus |
2L | 13773383..13773890 | 1916..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 13771118..13771246 | 1..129 | 100 | -> | Plus |
arm_2L | 13771337..13772571 | 130..1364 | 100 | -> | Plus |
arm_2L | 13772641..13772868 | 1365..1592 | 100 | -> | Plus |
arm_2L | 13772933..13773116 | 1593..1776 | 100 | -> | Plus |
arm_2L | 13773184..13773322 | 1777..1915 | 100 | -> | Plus |
arm_2L | 13773383..13773890 | 1916..2423 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 13771118..13771246 | 1..129 | 100 | -> | Plus |
2L | 13772933..13773116 | 1593..1776 | 100 | -> | Plus |
2L | 13773184..13773322 | 1777..1915 | 100 | -> | Plus |
2L | 13771337..13772571 | 130..1364 | 100 | -> | Plus |
2L | 13772641..13772868 | 1365..1592 | 100 | -> | Plus |
2L | 13773383..13773890 | 1916..2423 | 100 | Plus |
Translation from 123 to 2015
> GH02822.pep MQSGALARPCLAIVLLAGVVLVADSFYVPGVAPVEFVQDQKIDVKAVKMT SSRTQLPYQYYSLRFCYPKNGTLIFKSENLGEVLRGDRIVNTPYEVRMNQ QVNCRLLCNQKDRPLTWSKEDSALVAERIQHEYFVHLLVDNLPVATRIVS VNNPAEVTYEHGYRLGQVDGDNIYINNHLKFILSYHMHSKDKYRVVGFEV ETVSVSHKELKFHGDTCNFPDSARPQLVNPNGETQLYFTYSVEWKESKVS WASRWDIYLGMRDVQIHWFSIINSLVVVFFLSGILTMIMIRTLRRDIARY NTDDNIEDTLEETGWKLVHGDVFRPPKNTRLFSAIIGSGIQIFFMALITI FFAMLGMLSPSSRGALMTSGIFMYVFMGTIAGYYAARLYKTMKGREWKRA AFLTATLYPGIVFGTGFFLNFFIWDKSSSGAVPFTTMISLLLLWFGISVP LVYLGFYLGYRKQPYQHPVRTNMIPRQVPTQHWYMNAVLSTLMAGILPFG AVFIELFFVFTAIWQNQFYYLFGFLFLVFCILVVSCAQISIVMTYFQLCG EDYRWWWRSFVVSGGSAVYVLFYSIFYFFTKLEITEFIPTLLYLGYTGLM VLTFWLLTGSIGFFAAYVFILRIYGAVKID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF23049-PA | 625 | GF23049-PA | 10..625 | 13..630 | 3210 | 97.1 | Plus |
Dana\GF14550-PA | 663 | GF14550-PA | 26..663 | 23..630 | 1348 | 41.9 | Plus |
Dana\GF10453-PA | 599 | GF10453-PA | 65..599 | 55..630 | 824 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG23874-PA | 630 | GG23874-PA | 1..630 | 1..630 | 3346 | 99.4 | Plus |
Dere\GG21552-PA | 659 | GG21552-PA | 22..659 | 23..630 | 1344 | 42.1 | Plus |
Dere\GG14121-PA | 592 | GG14121-PA | 58..592 | 55..630 | 832 | 34.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH11109-PA | 626 | GH11109-PA | 7..626 | 11..630 | 3090 | 92.4 | Plus |
Dgri\GH10847-PA | 659 | GH10847-PA | 19..659 | 21..630 | 1355 | 42.1 | Plus |
Dgri\GH15015-PA | 585 | GH15015-PA | 51..585 | 55..630 | 814 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TM9SF4-PB | 630 | CG7364-PB | 1..630 | 1..630 | 3328 | 100 | Plus |
TM9SF4-PA | 630 | CG7364-PA | 1..630 | 1..630 | 3328 | 100 | Plus |
TM9SF2-PB | 659 | CG9318-PB | 9..659 | 9..630 | 1356 | 41.8 | Plus |
TM9SF2-PA | 659 | CG9318-PA | 9..659 | 9..630 | 1356 | 41.8 | Plus |
TM9SF3-PA | 592 | CG10590-PA | 58..592 | 55..630 | 925 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18231-PA | 626 | GI18231-PA | 7..626 | 11..630 | 3117 | 93.4 | Plus |
Dmoj\GI19598-PA | 657 | GI19598-PA | 10..657 | 13..630 | 1380 | 43.1 | Plus |
Dmoj\GI13177-PA | 585 | GI13177-PA | 51..585 | 55..630 | 810 | 34.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21220-PA | 634 | GL21220-PA | 7..634 | 5..630 | 3203 | 95.1 | Plus |
Dper\GL19593-PA | 624 | GL19593-PA | 24..624 | 23..630 | 1188 | 38.8 | Plus |
Dper\GL11985-PA | 590 | GL11985-PA | 57..590 | 55..630 | 753 | 33 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20298-PA | 634 | GA20298-PA | 7..634 | 5..630 | 3199 | 94.9 | Plus |
Dpse\GA21696-PA | 661 | GA21696-PA | 24..661 | 23..630 | 1346 | 41.8 | Plus |
Dpse\GA10420-PA | 591 | GA10420-PA | 57..591 | 55..630 | 843 | 34.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15157-PA | 630 | GM15157-PA | 1..630 | 1..630 | 3337 | 99 | Plus |
Dsec\GM23311-PA | 659 | GM23311-PA | 22..659 | 23..630 | 1349 | 42.1 | Plus |
Dsec\GM13907-PA | 592 | GM13907-PA | 58..592 | 55..630 | 838 | 35.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23917-PA | 623 | GD23917-PA | 1..623 | 1..630 | 3279 | 97.9 | Plus |
Dsim\GD21683-PA | 659 | GD21683-PA | 22..659 | 23..630 | 1349 | 42.1 | Plus |
Dsim\GD13184-PA | 645 | GD13184-PA | 58..645 | 55..630 | 822 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18139-PA | 626 | GJ18139-PA | 7..626 | 11..630 | 3103 | 92.4 | Plus |
Dvir\GJ17423-PA | 657 | GJ17423-PA | 7..657 | 11..630 | 1367 | 41.1 | Plus |
Dvir\GJ11952-PA | 585 | GJ11952-PA | 51..585 | 55..630 | 832 | 34.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK18190-PA | 630 | GK18190-PA | 22..630 | 22..630 | 3163 | 96.6 | Plus |
Dwil\GK14911-PA | 665 | GK14911-PA | 19..665 | 13..630 | 1350 | 40.8 | Plus |
Dwil\GK16877-PA | 586 | GK16877-PA | 52..586 | 55..630 | 817 | 34.4 | Plus |
Dwil\GK15232-PA | 666 | GK15232-PA | 23..634 | 22..628 | 578 | 27.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18677-PA | 630 | GE18677-PA | 1..630 | 1..630 | 3325 | 98.4 | Plus |
Dyak\GE13546-PA | 659 | GE13546-PA | 13..659 | 14..630 | 1349 | 42 | Plus |
Dyak\GE20545-PA | 593 | GE20545-PA | 59..593 | 55..630 | 837 | 35.1 | Plus |
Translation from 123 to 2015
> GH02822.hyp MQSGALARPCLAIVLLAGVVLVADSFYVPGVAPVEFVQDQKIDVKAVKMT SSRTQLPYQYYSLRFCYPKNGTLIFKSENLGEVLRGDRIVNTPYEVRMNQ QVNCRLLCNQKDRPLTWSKEDSALVAERIQHEYFVHLLVDNLPVATRIVS VNNPAEVTYEHGYRLGQVDGDNIYINNHLKFILSYHMHSKDKYRVVGFEV ETVSVSHKELKFHGDTCNFPDSARPQLVNPNGETQLYFTYSVEWKESKVS WASRWDIYLGMRDVQIHWFSIINSLVVVFFLSGILTMIMIRTLRRDIARY NTDDNIEDTLEETGWKLVHGDVFRPPKNTRLFSAIIGSGIQIFFMALITI FFAMLGMLSPSSRGALMTSGIFMYVFMGTIAGYYAARLYKTMKGREWKRA AFLTATLYPGIVFGTGFFLNFFIWDKSSSGAVPFTTMISLLLLWFGISVP LVYLGFYLGYRKQPYQHPVRTNMIPRQVPTQHWYMNAVLSTLMAGILPFG AVFIELFFVFTAIWQNQFYYLFGFLFLVFCILVVSCAQISIVMTYFQLCG EDYRWWWRSFVVSGGSAVYVLFYSIFYFFTKLEITEFIPTLLYLGYTGLM VLTFWLLTGSIGFFAAYVFILRIYGAVKID*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
TM9SF4-PB | 630 | CG7364-PB | 1..630 | 1..630 | 3328 | 100 | Plus |
TM9SF4-PA | 630 | CG7364-PA | 1..630 | 1..630 | 3328 | 100 | Plus |
CG9318-PB | 659 | CG9318-PB | 9..659 | 9..630 | 1356 | 41.8 | Plus |
CG9318-PA | 659 | CG9318-PA | 9..659 | 9..630 | 1356 | 41.8 | Plus |
CG10590-PA | 592 | CG10590-PA | 58..592 | 55..630 | 925 | 35.1 | Plus |