Clone GH02866 Report

Search the DGRC for GH02866

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:28
Well:66
Vector:pOT2
Associated Gene/TranscriptCG6758-RA
Protein status:GH02866.pep: gold
Preliminary Size:1300
Sequenced Size:2411

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG6758 2001-01-01 Release 2 assignment
CG6758 2003-01-01 Sim4 clustering to Release 3
CG6758 2005-02-28 Blastp of sequenced clone
CG6758 2008-04-29 Release 5.5 accounting
CG6758 2008-08-15 Release 5.9 accounting
CG6758 2008-12-18 5.12 accounting

Clone Sequence Records

GH02866.complete Sequence

2411 bp (2411 high quality bases) assembled on 2005-02-28

GenBank Submission: BT021444

> GH02866.complete
ACACTGTTCGCAGCTACTGTTTATGTTATAATTTATTTTTGTTGTATAAA
AACCCGAAAATCATCTGGAGTTCAAGCCAGCATATAAGTTCAGCGACTTA
AAATCATTCGCTGCCTATTGCTGCTTCTGTGGTGCAGCATCCGAGGGTGA
AGCACACCACGAAAGCCACGAAGAAAGGGGGCAGCAAGGACATCACAAAG
GATGGACGCGAGCAGATACAAGGTCGACGGCGAGAACGACAATTGCGGGG
CGACCTTGGCCGCTGTAAATCTGAATGTCCTTCCCGATGAGATACTGGAG
TTCATATTCACCTACCTGCCACCCTACGGCGACTTGGAGCACTGCAGCCT
GGTGTGCAAGCGATGGCACGCCATTGTGAAGAACCTTGTGCGTCGTTCCA
GACACAATCTCGAGAAGGGCCTCATCGACTTTCGACTGCGCTGGGAGGTG
TTTTCCCAGCAGACAGTCAATGGCGGGGCAGGAGCACTATTATCCTTTAT
TGCCGGAAGATTTGCTCATTCGGCTGTGCGGCAAGACAACTCCATGTACG
TATTCGGCGGTGGATCCTCGTCGGACACCACCTTCAACGATCTGTGGCGC
TTTGATTTGACGCACATGCGGTGGGCGCGGCCAGTGGCCACAGGAACCTA
TCCCTCGCCCAAGGGCAGTGCATCAATGGTGGCGTGGCGGAACCAGCTGA
TACTCTTTGGCGGATGGCGATACCCCTCGCTACATCCGCCCTACCAACCA
TGGTGCTTATTTGACGAGCTGCACTACTACGATCTTGGAAAGAACCGTTG
GCTGCTGCGAAGCTCCCTATCTTCCCCACCACCGATGGCTGGACACTCGG
CCACGGTACATGGCGATCGGATGGTAGTTTTTGGTGGTTACCAGATCAAA
GACGATTTCAATGTGAACTCGAACGACACATGGGTACTGGATCTGCCGGA
GCAGCGCTGGTGGCAGCCGCTCTTTGTGGGCAACACGCGACCCAGTCCGC
GATACGGACAAATACAGGTGGAGTTGGGAAGGAACCATCTGCTGATCGTG
GGAGGATGTGGCGGTGCCAATCGCGTGTACACTGATGCCTGGCTGCTGGA
CATGACCAGGGATGTATGGAGCTGGAAGTCTATTGCTGTGCGCAACAAGC
GCTTTGGAGCCGTCCACATGTGGTGCAATCCCGGTTGCAAGGTCAACAAC
TACCTGGTGGTCGTGGGCCCATCGCCCAACATGCCGCAGGACTTCCAAAT
GATGAAGCAAAGCAGAGTCCCCGTCGTTGGAGGCCGTGGACCTCCGCCGC
CGAATCCTCTTCAAAATGTACCTCCAAGGGGATACCGGATACCAGTTCCG
GATCGTCGACTAGGTGGAGGTGGATTGGGTGGACCTGGCCAAAATCGCGG
AGGAAACATCCGTCCTGGAGTGGGAGGTGCAGCAGCTGCACTGGGTCCTC
AAGAACAGTATTTGGCTAACCGGAGAGCAATTCTTAATCAACACATGCAG
CAAGCGCAGCAATTCCTGCACAACAGCAATGTGAACAATAATAACAATAA
TTACCAACCGCGCTCGGGAAGATTGAGTGATCTGCATGCCCCGCCAGCTG
CGGCTGCAGCTGCTTCTCCTCCATCCCCGCCAGTGCGACCAAATGCTCCG
CCATCTCCCGCCGACGGCGATGTGGATGCCGCACAGCGTTTGCAAAGAAA
TTTAGCTCTAAGGTGTCGTGATAATGAACCTAGGCTACCAAAACGTTTCG
ATGAGCTCTATGAGGATCCCTTTCGAATGGCCGCCTTCAATGTGCCCACA
CGATCGCGGAGTGCTTCGCGGGATCACAACGAGCGAATACGACGCATGGA
GGAGAAGATGAACGCCATTCGCAATTCGCGACGCAGCGCACCGGCGGCCG
CCCAAGTGGAACCACAACCGCTGCGCGCACCCTCGCCCAAACGATTGCGC
TGCAATGTGCAATCCCTGTTCGTGTGTGACATCTCCGGCATTTTGGACAG
CAGCGAACCCGCCCTCGAGTGGGTGGAATACAAAAACTTCGGAGTGCTTA
AGGGTGCTCCGGATCGGCTAATCCTCTCGAGCCTCATTGCTGGCAACGGC
GAGCTCATCCTCTTCGGGGGCGTGCACAAGGAGACACTAACGGACATCAC
ACATCATGTGTCCAATTCCATACACTTCCTGAGTGTGCCACGTGATATTA
TCTAAGCTCTGAACCGACGCCCGTCCTAGTCCAACGTTACGCGGATAGCA
CTTTGTTGCTGGTAACCCCACTTCCCAAATCCTTCAAAGTTCGGCGTAAG
AGGTTCATTTAGGCATTAAATTGAGTGTAATGAAGAATATGTTTTATGAT
TATAAACGATTATTTACTAGTGGATCTCAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAA

GH02866.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 17:42:25
Subject Length Description Subject Range Query Range Score Percent Strand
CG6758-RA 2470 CG6758-RA 93..2470 1..2378 11890 100 Plus
CG11170-RB 1302 CG11170-RB 1245..1302 2378..2321 290 100 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 12:48:10
Subject Length Description Subject Range Query Range Score Percent Strand
chr2R 21145070 chr2R 18061901..18063283 383..1765 6855 99.7 Plus
chr2R 21145070 chr2R 18063337..18063952 1763..2378 2990 99 Plus
chr2R 21145070 chr2R 18061461..18061842 1..382 1895 99.7 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:28:41 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 12:48:08
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 22175376..22176758 383..1765 6915 100 Plus
2R 25286936 2R 22176813..22177428 1763..2378 3080 100 Plus
2R 25286936 2R 22174936..22175317 1..382 1910 100 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 19:32:28
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25260384 2R 22176575..22177957 383..1765 6915 100 Plus
2R 25260384 2R 22178012..22178627 1763..2378 3080 100 Plus
2R 25260384 2R 22176135..22176516 1..382 1910 100 Plus
Blast to na_te.dros performed on 2019-03-15 12:48:08 has no hits.

GH02866.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 12:49:19 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
chr2R 18061461..18061842 1..382 99 -> Plus
chr2R 18061901..18063282 383..1764 99 -> Plus
chr2R 18063339..18063952 1765..2378 99   Plus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:09:01 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 1..2004 202..2205 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 16:10:09 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 1..2004 202..2205 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-03 21:49:56 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 1..2004 202..2205 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 16:54:55 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 1..2004 202..2205 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:09:50 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 1..2004 202..2205 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-10 19:02:33 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 31..2408 1..2378 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 16:10:08 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 29..2406 1..2378 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 21:49:56 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 15..2392 1..2378 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 16:54:55 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 31..2408 1..2378 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:09:50 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
CG6758-RA 15..2392 1..2378 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:49:19 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22174936..22175317 1..382 100 -> Plus
2R 22175376..22176757 383..1764 100 -> Plus
2R 22176815..22177428 1765..2378 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:49:19 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22174936..22175317 1..382 100 -> Plus
2R 22175376..22176757 383..1764 100 -> Plus
2R 22176815..22177428 1765..2378 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 12:49:19 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22174936..22175317 1..382 100 -> Plus
2R 22175376..22176757 383..1764 100 -> Plus
2R 22176815..22177428 1765..2378 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 21:49:56 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 18062441..18062822 1..382 100 -> Plus
arm_2R 18062881..18064262 383..1764 100 -> Plus
arm_2R 18064320..18064933 1765..2378 100   Plus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 13:30:04 Download gff for GH02866.complete
Subject Subject Range Query Range Percent Splice Strand
2R 22176135..22176516 1..382 100 -> Plus
2R 22176575..22177956 383..1764 100 -> Plus
2R 22178014..22178627 1765..2378 100   Plus

GH02866.pep Sequence

Translation from 201 to 2204

> GH02866.pep
MDASRYKVDGENDNCGATLAAVNLNVLPDEILEFIFTYLPPYGDLEHCSL
VCKRWHAIVKNLVRRSRHNLEKGLIDFRLRWEVFSQQTVNGGAGALLSFI
AGRFAHSAVRQDNSMYVFGGGSSSDTTFNDLWRFDLTHMRWARPVATGTY
PSPKGSASMVAWRNQLILFGGWRYPSLHPPYQPWCLFDELHYYDLGKNRW
LLRSSLSSPPPMAGHSATVHGDRMVVFGGYQIKDDFNVNSNDTWVLDLPE
QRWWQPLFVGNTRPSPRYGQIQVELGRNHLLIVGGCGGANRVYTDAWLLD
MTRDVWSWKSIAVRNKRFGAVHMWCNPGCKVNNYLVVVGPSPNMPQDFQM
MKQSRVPVVGGRGPPPPNPLQNVPPRGYRIPVPDRRLGGGGLGGPGQNRG
GNIRPGVGGAAAALGPQEQYLANRRAILNQHMQQAQQFLHNSNVNNNNNN
YQPRSGRLSDLHAPPAAAAAASPPSPPVRPNAPPSPADGDVDAAQRLQRN
LALRCRDNEPRLPKRFDELYEDPFRMAAFNVPTRSRSASRDHNERIRRME
EKMNAIRNSRRSAPAAAQVEPQPLRAPSPKRLRCNVQSLFVCDISGILDS
SEPALEWVEYKNFGVLKGAPDRLILSSLIAGNGELILFGGVHKETLTDIT
HHVSNSIHFLSVPRDII*

GH02866.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-15 15:48:14
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF11651-PA 664 GF11651-PA 1..664 1..667 3017 88.1 Plus
Dana\GF22052-PA 971 GF22052-PA 246..426 101..288 189 29.1 Plus
Dana\GF19570-PA 1483 GF19570-PA 71..282 103..307 155 27.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-15 15:48:15
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG22168-PA 666 GG22168-PA 1..666 1..667 3478 98.4 Plus
Dere\GG12733-PA 975 GG12733-PA 250..430 101..288 195 29.6 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-15 15:48:16
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH23072-PA 684 GH23072-PA 9..684 12..667 2504 75.2 Plus
Dgri\GH12418-PA 985 GH12418-PA 259..440 101..288 187 29.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:07:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG6758-PA 667 CG6758-PA 1..667 1..667 3613 100 Plus
CG3711-PE 975 CG3711-PE 250..430 101..288 190 29.1 Plus
CG3711-PD 998 CG3711-PD 250..430 101..288 190 29.1 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-15 15:48:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI21140-PA 687 GI21140-PA 30..687 21..667 2528 78 Plus
Dmoj\GI15003-PA 968 GI15003-PA 242..423 101..288 189 30.2 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-15 15:48:18
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL11785-PA 722 GL11785-PA 1..410 1..403 1749 82.9 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-15 15:48:19
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA19840-PC 676 GA19840-PC 1..676 1..667 2777 85.5 Plus
Dpse\GA19840-PB 676 GA19840-PB 1..676 1..667 2777 85.5 Plus
Dpse\GA19840-PA 676 GA19840-PA 1..676 1..667 2777 85.5 Plus
Dpse\GA17633-PA 982 GA17633-PA 256..437 101..288 183 28.9 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-15 15:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM15889-PA 666 GM15889-PA 1..666 1..667 3502 98.8 Plus
Dsec\GM19013-PA 974 GM19013-PA 249..429 101..288 196 29.1 Plus
Dsec\GM24640-PA 359 GM24640-PA 79..283 111..305 153 23 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-15 15:48:20
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD15446-PA 68 GD15446-PA 1..50 1..50 274 98 Plus
Dsim\GD16450-PA 974 GD16450-PA 249..429 101..288 196 29.1 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-15 15:48:21
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ20987-PA 682 GJ20987-PA 9..682 12..667 2514 77.3 Plus
Dvir\GJ15361-PA 966 GJ15361-PA 240..421 101..288 187 29.6 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-15 15:48:22
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK19639-PA 686 GK19639-PA 30..686 22..667 2604 79.5 Plus
Dwil\GK10175-PA 937 GK10175-PA 210..391 101..288 189 29.5 Plus
Dwil\GK13582-PA 1497 GK13582-PA 69..280 103..307 159 27.8 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-15 15:48:23
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE14161-PA 666 GE14161-PA 1..666 1..667 3456 97.8 Plus
Dyak\GE16559-PA 984 GE16559-PA 258..439 101..288 184 29.5 Plus

GH02866.hyp Sequence

Translation from 201 to 2204

> GH02866.hyp
MDASRYKVDGENDNCGATLAAVNLNVLPDEILEFIFTYLPPYGDLEHCSL
VCKRWHAIVKNLVRRSRHNLEKGLIDFRLRWEVFSQQTVNGGAGALLSFI
AGRFAHSAVRQDNSMYVFGGGSSSDTTFNDLWRFDLTHMRWARPVATGTY
PSPKGSASMVAWRNQLILFGGWRYPSLHPPYQPWCLFDELHYYDLGKNRW
LLRSSLSSPPPMAGHSATVHGDRMVVFGGYQIKDDFNVNSNDTWVLDLPE
QRWWQPLFVGNTRPSPRYGQIQVELGRNHLLIVGGCGGANRVYTDAWLLD
MTRDVWSWKSIAVRNKRFGAVHMWCNPGCKVNNYLVVVGPSPNMPQDFQM
MKQSRVPVVGGRGPPPPNPLQNVPPRGYRIPVPDRRLGGGGLGGPGQNRG
GNIRPGVGGAAAALGPQEQYLANRRAILNQHMQQAQQFLHNSNVNNNNNN
YQPRSGRLSDLHAPPAAAAAASPPSPPVRPNAPPSPADGDVDAAQRLQRN
LALRCRDNEPRLPKRFDELYEDPFRMAAFNVPTRSRSASRDHNERIRRME
EKMNAIRNSRRSAPAAAQVEPQPLRAPSPKRLRCNVQSLFVCDISGILDS
SEPALEWVEYKNFGVLKGAPDRLILSSLIAGNGELILFGGVHKETLTDIT
HHVSNSIHFLSVPRDII*

GH02866.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:31:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG6758-PA 667 CG6758-PA 1..667 1..667 3613 100 Plus
CG3711-PE 975 CG3711-PE 250..430 101..288 190 29.1 Plus
CG3711-PD 998 CG3711-PD 250..430 101..288 190 29.1 Plus