BDGP Sequence Production Resources |
Search the DGRC for GH02938
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 29 |
Well: | 38 |
Vector: | pOT2 |
Associated Gene/Transcript | CG1537-RA |
Protein status: | GH02938.pep: gold |
Preliminary Size: | 981 |
Sequenced Size: | 830 |
Gene | Date | Evidence |
---|---|---|
CG1537 | 2002-01-01 | Sim4 clustering to Release 2 |
CG1537 | 2002-05-01 | Blastp of sequenced clone |
CG1537 | 2003-01-01 | Sim4 clustering to Release 3 |
CG1537 | 2008-04-29 | Release 5.5 accounting |
CG1537 | 2008-08-15 | Release 5.9 accounting |
CG1537 | 2008-12-18 | 5.12 accounting |
830 bp (830 high quality bases) assembled on 2002-05-01
GenBank Submission: AY102654
> GH02938.complete CAGGGGCGACATTCGCAGCGGCAACGAAAGCGACAGCCATAGCATACCCA TCCATCTACCTATACACTTGCACATTGTCACCTGGCACCTGGCACCCATA CATACGCAGATCACCAACACAAACGCAGACACTGTTAAAAAGAGAGAGTG CGGGAGAGAGAATTCAAGAAAGTGATCAAGAAGGAAAGCTAGAAAGGCGG TGTGTGTGCGTTTGTGCGTTTGTGTGTTTGTGAATGCACGCCGGAAATGG CCAAATTAGTGACTTACATCTTCATCGTCAGCTCCCTGGTCCTCTGGTAC CTCCTGCTTTTCGGTGGCAGGGGCGTCAGAGGCGTGGAGGCCACCAACGG GCACGGGGGTCAGCTGGAGGGACGGGACTTTCATCACCATGGCGGCAGTC ACCACATTCGCCGTAACATTAACCATTGCTGGCGCCGTTACGATGGCTAC AATCTGCAGAACACTGTGGTCAACAAAAAGGAGCAGCTGAAGAAGCCCTA TGGCATATTGTGCAACTTCAAGTGCACCTGGTTCTTCACCGTCAGCTTCC CCACTTGCGAGTTCATCTACGATTATAAGTTATCCTGCGTGCTGTTCACT TCACTGCCCGACTGTACCAGCGTCCAGTGTACGCTTATGAATTACTTCGA TTAACTATGTTAGTGTATCTATTTAAGTATCTTTTTTTTGATAGCCTAAG TCTGATTAATACTAGATTTTATATGGACATGTAGTGCGATTTAGAAAGAA AGTATTATTAAATCAAAAGACCTAATTTATGAGAACGAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1537-RA | 902 | CG1537-RA | 110..898 | 1..789 | 3945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 10953932..10954347 | 416..1 | 2065 | 99.8 | Minus |
chrX | 22417052 | chrX | 10953286..10953530 | 787..543 | 1210 | 99.6 | Minus |
chrX | 22417052 | chrX | 10953590..10953722 | 545..413 | 665 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 10953286..10953527 | 546..787 | 99 | <- | Minus |
chrX | 10953590..10953722 | 413..545 | 100 | <- | Minus |
chrX | 10953936..10954347 | 1..412 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 1..408 | 247..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 1..408 | 247..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 1..408 | 247..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 1..408 | 247..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 1..408 | 247..654 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 1..784 | 4..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 1..784 | 4..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 83..869 | 1..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 1..784 | 4..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG1537-RA | 83..869 | 1..787 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11062027..11062268 | 546..787 | 100 | <- | Minus |
X | 11062331..11062463 | 413..545 | 100 | <- | Minus |
X | 11062677..11063088 | 1..412 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11062027..11062268 | 546..787 | 100 | <- | Minus |
X | 11062331..11062463 | 413..545 | 100 | <- | Minus |
X | 11062677..11063088 | 1..412 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11062027..11062268 | 546..787 | 100 | <- | Minus |
X | 11062331..11062463 | 413..545 | 100 | <- | Minus |
X | 11062677..11063088 | 1..412 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 10956060..10956301 | 546..787 | 100 | <- | Minus |
arm_X | 10956364..10956496 | 413..545 | 100 | <- | Minus |
arm_X | 10956710..10957121 | 1..412 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 11070125..11070366 | 546..787 | 100 | <- | Minus |
X | 11070429..11070561 | 413..545 | 100 | <- | Minus |
X | 11070775..11071186 | 1..412 | 100 | Minus |
Translation from 246 to 653
> GH02938.pep MAKLVTYIFIVSSLVLWYLLLFGGRGVRGVEATNGHGGQLEGRDFHHHGG SHHIRRNINHCWRRYDGYNLQNTVVNKKEQLKKPYGILCNFKCTWFFTVS FPTCEFIYDYKLSCVLFTSLPDCTSVQCTLMNYFD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20398-PA | 142 | GF20398-PA | 1..142 | 1..135 | 620 | 85.9 | Plus |
Dana\GF20399-PA | 149 | GF20399-PA | 72..136 | 59..128 | 138 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18884-PA | 138 | GG18884-PA | 1..138 | 1..135 | 707 | 97.1 | Plus |
Dere\GG18885-PA | 84 | GG18885-PA | 7..71 | 59..128 | 136 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17595-PA | 140 | GH17595-PA | 1..140 | 1..135 | 660 | 87.1 | Plus |
Dgri\GH17596-PA | 123 | GH17596-PA | 45..109 | 59..128 | 138 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG1537-PA | 135 | CG1537-PA | 1..135 | 1..135 | 760 | 100 | Plus |
CG1545-PB | 128 | CG1545-PB | 51..115 | 59..128 | 148 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16460-PA | 134 | GI16460-PA | 1..134 | 1..135 | 640 | 85.2 | Plus |
Dmoj\GI16462-PA | 86 | GI16462-PA | 9..73 | 59..128 | 138 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18314-PA | 133 | GL18314-PA | 1..133 | 1..135 | 654 | 89.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA13678-PA | 133 | GA13678-PA | 1..133 | 1..135 | 654 | 89.6 | Plus |
Dpse\GA13738-PA | 150 | GA13738-PA | 72..136 | 59..128 | 143 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM11267-PA | 135 | GM11267-PA | 1..135 | 1..135 | 723 | 99.3 | Plus |
Dsec\GM11268-PA | 161 | GM11268-PA | 84..148 | 59..128 | 141 | 37.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD16003-PA | 135 | GD16003-PA | 1..135 | 1..135 | 723 | 99.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ15938-PA | 141 | GJ15938-PA | 1..141 | 1..135 | 607 | 85.1 | Plus |
Dvir\GJ15939-PA | 173 | GJ15939-PA | 96..160 | 59..128 | 139 | 37.1 | Plus |
Translation from 246 to 653
> GH02938.hyp MAKLVTYIFIVSSLVLWYLLLFGGRGVRGVEATNGHGGQLEGRDFHHHGG SHHIRRNINHCWRRYDGYNLQNTVVNKKEQLKKPYGILCNFKCTWFFTVS FPTCEFIYDYKLSCVLFTSLPDCTSVQCTLMNYFD*