BDGP Sequence Production Resources |
Search the DGRC for GH02974
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 29 |
Well: | 74 |
Vector: | pOT2 |
Associated Gene/Transcript | amx-RA |
Protein status: | GH02974.pep: gold |
Preliminary Size: | 1424 |
Sequenced Size: | 1440 |
Gene | Date | Evidence |
---|---|---|
CG12127 | 2000-02-14 | Blastp of sequenced clone |
CG2194 | 2001-01-01 | Release 2 assignment |
CG9022 | 2001-01-01 | Release 2 assignment |
CG9034 | 2001-01-01 | Release 2 assignment |
CG9060 | 2001-01-01 | Release 2 assignment |
CG12664 | 2001-01-01 | Release 2 assignment |
CG12666 | 2001-01-01 | Release 2 assignment |
CG8971 | 2001-01-01 | Release 2 assignment |
CG8989 | 2001-01-01 | Release 2 assignment |
CG12115 | 2001-01-01 | Release 2 assignment |
CG12118 | 2001-01-01 | Release 2 assignment |
CG12119 | 2001-01-01 | Release 2 assignment |
CG12120 | 2001-01-01 | Release 2 assignment |
CG12121 | 2001-01-01 | Release 2 assignment |
CG12122 | 2001-01-01 | Release 2 assignment |
CG12124 | 2001-01-01 | Release 2 assignment |
CG12127 | 2001-01-01 | Release 2 assignment |
CG12127 | 2003-01-01 | Sim4 clustering to Release 3 |
amx | 2008-04-29 | Release 5.5 accounting |
amx | 2008-08-15 | Release 5.9 accounting |
amx | 2008-12-18 | 5.12 accounting |
1440 bp (1440 high quality bases) assembled on 2000-02-14
GenBank Submission: AF181623
> GH02974.complete CCAATGGTCACAACTTAAATGGAAAGGATATTAGGATTAGATATTACTAA TTTGTTACGATGAGGGGAGAGGTATACTTATCTGTTTAGCCAATTTAATT GAGCCAAAACATATCTATAAACTATTCGATACGCTTTTTAAAGAAATTTC TCCTGAGCATTCGCGGTTGATATTTTCATGCCACGCGTATACGGTCACAC TCTCCCACCCCACTCATTTTCTTAAAGGGAAAAACAATAACATTTCCGGC GTATTCCCCGCTCTATCTGACCAAAATGAGGCTCCAACGACAGTGCATTG TGGTCAACATGCGATCGGCCATTGTCCTGATCATGATCTTCGTGCTGACG GGGATCAGGAACAGCGAAACGGCCAGCGGTGGCAACCAGATGGACTTATC GGACTCAAAAGGCGATCACAAGGATAACAGCAATGCGAGCAATGGCAATG GAAATGCCAACGATAACGAGGTGTATGTGCCGCCCCTGGTGTCCAGCATG GTGGCCAAGAGTGGAGGAGGTGCCGGTGGACTCCTGGACAACATAACCGC CTACAGCAGCAGCAGCAGTAGCAGTAGCAGCAATGGGAACAACAACATGC TATGCCCGTACGATAAGGAAACGCCCTGTGATCGCCTGCAGTTTCCCTGC ATCCGTTGCAACTACAATCATGGATGCATCTACGGCCGGGACTTGAATGT AACCTGCGAGGTGATCAACAATGTCCAGTGCCTGGGCGAACGGAGTTTCC AGCGACAAATGAATTGCCGATACTGCTACCAAACGGAAATGTGGCAACAG AGCTGTGGCCAGCGCTCCAGTTGCAACTCGGCGACGGATAAGCTATTCCG TACCAACTGCACCGTGCACCATGATGTGCTCTGCCTCGGCAATCGATCCT TTACCCGCAACCTGCGATGCAACTGGACGCAGGGCTATCGGTGGAGCACA GCCCTGCTGATTAGCCTCACGCTAGGGGGCTTTGGAGCCGATCGATTCTA CTTGGGCCACTGGCAGGAAGGGATTGGAAAGCTGTTCAGCTTTGGCGGCC TCGGCGTCTGGACCATCATCGATGTCCTGCTCATCTCGATGCATTATTTG GGGCCAGCGGATGGCTCACTTTACATATAGTTTAGTTTTACAGGGGTTAA TAGGTCATAAGCTAACTTTTCCATTACAGTGTACATAATAACGAATGCAA ATATGCAACCATTAGGAATAGCAAGATCTTCTCAAAAACGTGTACATAAT TAATTAGGAAATGTATTTTATTAATAATGCCAAAAGTTCTTTTTTGTATC TTTTATCTAGCACAATTCTTTGATCGTATCAATAAATAAGTGAAAGAGAA AATATAACCATCTCTTTCTCGTTCCTGTAAGATCAGACAAATTTGTAAAA ATAAATGGTTTGTTTCATTCAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
amx-RA | 1422 | amx-RA | 1..1422 | 1..1422 | 7110 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chrX | 22417052 | chrX | 9137733..9139154 | 1422..1 | 7020 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23542271 | X | 9245913..9247336 | 1424..1 | 7120 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
X | 23527363 | X | 9254011..9255434 | 1424..1 | 7120 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2418..2477 | 539..598 | 120 | 66.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chrX | 9137733..9139154 | 1..1422 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..855 | 276..1130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..855 | 276..1130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..855 | 276..1130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..855 | 276..1130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..855 | 276..1130 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
amx-RA | 1..1422 | 1..1422 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9245915..9247336 | 1..1422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9245915..9247336 | 1..1422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9245915..9247336 | 1..1422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_X | 9139948..9141369 | 1..1422 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
X | 9254013..9255434 | 1..1422 | 100 | Minus |
Translation from 275 to 1129
> GH02974.pep MRLQRQCIVVNMRSAIVLIMIFVLTGIRNSETASGGNQMDLSDSKGDHKD NSNASNGNGNANDNEVYVPPLVSSMVAKSGGGAGGLLDNITAYSSSSSSS SSNGNNNMLCPYDKETPCDRLQFPCIRCNYNHGCIYGRDLNVTCEVINNV QCLGERSFQRQMNCRYCYQTEMWQQSCGQRSSCNSATDKLFRTNCTVHHD VLCLGNRSFTRNLRCNWTQGYRWSTALLISLTLGGFGADRFYLGHWQEGI GKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF19095-PA | 282 | GF19095-PA | 1..282 | 1..284 | 1146 | 78.9 | Plus |
Dana\GF12097-PA | 183 | GF12097-PA | 24..158 | 149..284 | 214 | 36.2 | Plus |
Dana\GF15960-PA | 205 | GF15960-PA | 109..199 | 192..281 | 188 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG18987-PA | 285 | GG18987-PA | 1..285 | 1..284 | 1481 | 98.6 | Plus |
Dere\GG20778-PA | 178 | GG20778-PA | 59..153 | 192..284 | 214 | 44.2 | Plus |
Dere\GG17813-PA | 223 | GG17813-PA | 130..217 | 195..281 | 181 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH12700-PA | 275 | GH12700-PA | 1..275 | 1..284 | 1038 | 72.5 | Plus |
Dgri\GH21182-PA | 182 | GH21182-PA | 62..153 | 195..284 | 226 | 47.8 | Plus |
Dgri\GH17747-PA | 216 | GH17747-PA | 120..210 | 192..281 | 186 | 44 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
amx-PB | 284 | CG12127-PB | 1..284 | 1..284 | 1543 | 100 | Plus |
amx-PA | 284 | CG12127-PA | 1..284 | 1..284 | 1543 | 100 | Plus |
CG10795-PA | 178 | CG10795-PA | 59..153 | 192..284 | 218 | 44.2 | Plus |
CG11103-PB | 172 | CG11103-PB | 79..166 | 195..281 | 184 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI14465-PA | 268 | GI14465-PA | 1..268 | 1..284 | 1047 | 73.2 | Plus |
Dmoj\GI20469-PA | 183 | GI20469-PA | 60..154 | 192..284 | 220 | 45.3 | Plus |
Dmoj\GI15502-PA | 218 | GI15502-PA | 122..212 | 192..281 | 185 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18280-PA | 271 | GL18280-PA | 1..271 | 1..284 | 1118 | 79.6 | Plus |
Dper\GL11844-PA | 179 | GL11844-PA | 60..154 | 192..284 | 212 | 44.2 | Plus |
Dper\GL19845-PA | 219 | GL19845-PA | 123..213 | 192..281 | 187 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11421-PA | 282 | GA11421-PA | 1..249 | 1..262 | 971 | 75.6 | Plus |
Dpse\GA10564-PA | 179 | GA10564-PA | 60..154 | 192..284 | 212 | 44.2 | Plus |
Dpse\GA10761-PA | 219 | GA10761-PA | 123..213 | 192..281 | 187 | 42.9 | Plus |
Dpse\GA26125-PA | 78 | GA26125-PA | 1..58 | 12..71 | 175 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22327-PA | 286 | GM22327-PA | 1..286 | 1..284 | 1490 | 98.6 | Plus |
Dsec\GM15723-PA | 178 | GM15723-PA | 59..153 | 192..284 | 214 | 44.2 | Plus |
Dsec\GM17641-PA | 224 | GM17641-PA | 131..218 | 195..281 | 181 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD24561-PA | 285 | GD24561-PA | 1..285 | 1..284 | 1470 | 97.9 | Plus |
Dsim\GD25200-PA | 178 | GD25200-PA | 59..153 | 192..284 | 214 | 44.2 | Plus |
Dsim\GD17144-PA | 224 | GD17144-PA | 131..218 | 195..281 | 181 | 45.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18800-PA | 268 | GJ18800-PA | 1..268 | 1..284 | 1075 | 73.2 | Plus |
Dvir\GJ22319-PA | 182 | GJ22319-PA | 59..153 | 192..284 | 222 | 45.3 | Plus |
Dvir\GJ19261-PA | 220 | GJ19261-PA | 124..214 | 192..281 | 182 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK25793-PA | 269 | GK25793-PA | 1..269 | 1..284 | 1031 | 73.9 | Plus |
Dwil\GK10083-PA | 201 | GK10083-PA | 1..198 | 1..213 | 595 | 59.2 | Plus |
Dwil\GK20744-PA | 179 | GK20744-PA | 56..154 | 188..284 | 214 | 43.4 | Plus |
Dwil\GK25073-PA | 218 | GK25073-PA | 122..212 | 192..281 | 185 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE15460-PA | 283 | GE15460-PA | 1..283 | 1..284 | 1470 | 98.2 | Plus |
Dyak\GE13716-PA | 178 | GE13716-PA | 59..153 | 180..284 | 213 | 43.8 | Plus |
Dyak\GE17109-PA | 224 | GE17109-PA | 131..218 | 195..281 | 182 | 45.5 | Plus |
Translation from 275 to 1129
> GH02974.hyp MRLQRQCIVVNMRSAIVLIMIFVLTGIRNSETASGGNQMDLSDSKGDHKD NSNASNGNGNANDNEVYVPPLVSSMVAKSGGGAGGLLDNITAYSSSSSSS SSNGNNNMLCPYDKETPCDRLQFPCIRCNYNHGCIYGRDLNVTCEVINNV QCLGERSFQRQMNCRYCYQTEMWQQSCGQRSSCNSATDKLFRTNCTVHHD VLCLGNRSFTRNLRCNWTQGYRWSTALLISLTLGGFGADRFYLGHWQEGI GKLFSFGGLGVWTIIDVLLISMHYLGPADGSLYI*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
amx-PB | 284 | CG12127-PB | 1..284 | 1..284 | 1543 | 100 | Plus |
amx-PA | 284 | CG12127-PA | 1..284 | 1..284 | 1543 | 100 | Plus |
CG10795-PA | 178 | CG10795-PA | 59..153 | 192..284 | 218 | 44.2 | Plus |
CG11103-PB | 172 | CG11103-PB | 79..166 | 195..281 | 184 | 45.5 | Plus |