BDGP Sequence Production Resources |
Search the DGRC for GH03051
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 30 |
Well: | 51 |
Vector: | pOT2 |
Associated Gene/Transcript | Gclm-RA |
Protein status: | GH03051.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1257 |
Gene | Date | Evidence |
---|---|---|
CG4919 | 2001-01-01 | Release 2 assignment |
CG4919 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4919 | 2003-01-10 | Blastp of sequenced clone |
Gclm | 2008-04-29 | Release 5.5 accounting |
Gclm | 2008-08-15 | Release 5.9 accounting |
Gclm | 2008-12-18 | 5.12 accounting |
1257 bp (1257 high quality bases) assembled on 2003-01-10
GenBank Submission: BT003312
> GH03051.complete CAGCAGAATTTATTTCTCTCTCCACACTTCGGTGCAAAGTGTATTTAAGT GGCCAAGCGGTCGGTGCTCGAGAACACACGCGTTTCACACACCTGAGAGG GCTGCAGTTGTCTGGACGGTCGCGAAAGTAGCAGATACCAAATAAGGAGA ACACTTGTCACCATGATACCGACCATAACGAAGAAGTACCAGAACGTGGT GATTAGCACGGGCAACATCATCGCCACGGAACTGGGACAGCGCAAATCGA ACGAGGAGCTGTACGACGGCCTGAAGATAACGCTCCACACCGACTCGACT GCGGAGCGCGTGGTGGTTGAAAAGGAGATCGACGAGCTGCATGGGCGGGT GCAAAGGGCCACCCAGGAGTTGACCACCCGCTTGACGGAGAATGGACGGA ATGAGATAAGTATCGGTGCCAAGATATTCCTCAATCGCCACTCCACAGAG TCTGTGAATCAGGCGGTGGAGGAGCTGCTCCACATACTTAGTGTGACGCA CGTGGACAATGTGGTGTTGGCCTACCACCCGAATGCGGTTGCCACCGCAA CGCCGGTGGCCACAACCAAACCGCCCTGTTCCGAGGATTCCAACGTCAGC AGGGCTACAAACTGGAGCCAGCGCAATGGAAAGGAAGGAGTGGCAGAGCT GAAGGAACTGTACAAAACACTGGAGCAATATGCCCTCAAGCAGCAGATTA CACAGCTGGGAATTGCCGATCTGGATGCGGCGGCGCTGGAGGAGCTACAC AACAGCGCACAGGTTGTGCCCACAATTGCCCAGGTCAACCTGTCTACGTG CTGCGTGGTGCCACCAGAACTGCAGGAGTTCTGCACCGCTCACGACATCC AACTGAACACGCACAGCGATCCCGAGCTCCTGCTGCCCGTGGAGCAGTTC GACGGACTGGTCCCTGGCTACACAATCGACTGGACACTGCGTTACCAGGT GCATGTCCGCTGCCGGGGCGTTCTCACCGCCAAGGGCTACATCGTGGGCG CGTCGAGGTCGAGCGTTTAGTTTTAAGTAACTCCCACATACAGATGCTAG GCTATAGTTTTAATGTTTGTAATGTATGCTGTGTACAGTGGTGTACTTAT TGTTTGTTATACAAAACCCAAATTGATGATTCGAAGCCGATCGATTCACT TTGCTGTAAACGATTTTAAAATACTTATTCTGAACATAAAGCGTTTCAAA AACGACAATTGGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gclm-RA | 1522 | Gclm-RA | 16..1230 | 1..1215 | 6075 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 18508809..18510021 | 1213..1 | 5990 | 99.6 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 22685298..22686512 | 1215..1 | 6075 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 22426129..22427343 | 1215..1 | 6075 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 18508809..18510021 | 1..1213 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 1..858 | 163..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 1..858 | 163..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 1..858 | 163..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 1..858 | 163..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 1..858 | 163..1020 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 16..1228 | 1..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 16..1228 | 1..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 1..1211 | 3..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 16..1228 | 1..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Gclm-RA | 1..1211 | 3..1213 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22685300..22686512 | 1..1213 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22685300..22686512 | 1..1213 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22685300..22686512 | 1..1213 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 18511022..18512234 | 1..1213 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 22426131..22427343 | 1..1213 | 100 | Minus |
Translation from 162 to 1019
> GH03051.pep MIPTITKKYQNVVISTGNIIATELGQRKSNEELYDGLKITLHTDSTAERV VVEKEIDELHGRVQRATQELTTRLTENGRNEISIGAKIFLNRHSTESVNQ AVEELLHILSVTHVDNVVLAYHPNAVATATPVATTKPPCSEDSNVSRATN WSQRNGKEGVAELKELYKTLEQYALKQQITQLGIADLDAAALEELHNSAQ VVPTIAQVNLSTCCVVPPELQEFCTAHDIQLNTHSDPELLLPVEQFDGLV PGYTIDWTLRYQVHVRCRGVLTAKGYIVGASRSSV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18002-PA | 294 | GF18002-PA | 1..293 | 1..284 | 1159 | 79.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12498-PA | 285 | GG12498-PA | 1..284 | 1..284 | 1394 | 92.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH21780-PA | 294 | GH21780-PA | 1..290 | 1..284 | 1060 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Gclm-PB | 285 | CG4919-PB | 1..285 | 1..285 | 1455 | 100 | Plus |
Gclm-PA | 285 | CG4919-PA | 1..285 | 1..285 | 1455 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI21925-PA | 295 | GI21925-PA | 1..292 | 1..284 | 1044 | 72.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL24293-PA | 225 | GL24293-PA | 52..212 | 124..282 | 644 | 76.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA18525-PA | 305 | GA18525-PA | 1..292 | 1..282 | 1122 | 74.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM23630-PA | 285 | GM23630-PA | 1..285 | 1..285 | 1448 | 96.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD18440-PA | 285 | GD18440-PA | 1..285 | 1..285 | 1469 | 97.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10701-PA | 296 | GJ10701-PA | 1..291 | 1..282 | 1068 | 72 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11954-PA | 294 | GK11954-PA | 1..292 | 1..284 | 1134 | 76.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE24018-PA | 285 | GE24018-PA | 1..284 | 1..284 | 1419 | 93.7 | Plus |
Translation from 162 to 1019
> GH03051.hyp MIPTITKKYQNVVISTGNIIATELGQRKSNEELYDGLKITLHTDSTAERV VVEKEIDELHGRVQRATQELTTRLTENGRNEISIGAKIFLNRHSTESVNQ AVEELLHILSVTHVDNVVLAYHPNAVATATPVATTKPPCSEDSNVSRATN WSQRNGKEGVAELKELYKTLEQYALKQQITQLGIADLDAAALEELHNSAQ VVPTIAQVNLSTCCVVPPELQEFCTAHDIQLNTHSDPELLLPVEQFDGLV PGYTIDWTLRYQVHVRCRGVLTAKGYIVGASRSSV*