BDGP Sequence Production Resources |
Search the DGRC for GH03058
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 30 |
Well: | 58 |
Vector: | pOT2 |
Associated Gene/Transcript | CG11796-RB |
Protein status: | GH03058.pep: gold |
Preliminary Size: | 1646 |
Sequenced Size: | 1507 |
Gene | Date | Evidence |
---|---|---|
CG11796 | 2001-01-01 | Release 2 assignment |
CG11796 | 2001-07-04 | Blastp of sequenced clone |
CG11796 | 2003-01-01 | Sim4 clustering to Release 3 |
CG11796 | 2008-04-29 | Release 5.5 accounting |
CG11796 | 2008-08-15 | Release 5.9 accounting |
CG11796 | 2008-12-18 | 5.12 accounting |
1507 bp (1507 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047523
> GH03058.complete AGATCGACGGAACGAAGAAATCTATATCGCGTGCGAGGAGAGGATTTGCA TAAATTGAGTCTGAGTGATAATGGTAAATGAGACGATGGGACATGTGGTG GCTATGTGGTTATGTAACAGCCCTTTAGTGCGAATTAAATGGACTTTAAA GAGTTCTCAAACAGGATTTATAACAAATACTGTCTAACAAAAGCGGATAA ACCAATGATAATTATACAGACTTTCTAAGGATCCATTTCAAGGTGATCTA ATTCTAATGACTTCTATTATTTCTTTTTAACTACCAACAGACCAGCTATA CTGACAAAGGAACCAAACCTGAAGCCGGCAAATTTCTAAGCTTTGATCAC TTAACCTTCTACGTTGGCAACGCCAAGCAGGCGGCCAGCTACTATACCAC TCGACTGGGCTTCGAACCACTTGGCTATCAGGGATTAGACCGGGGAGCGA CGCTTCGCCAAGCATGCCGTCCGCCAGAACAAGATCGTCTTTGTGTTCGT CTCCGCCTACACGCCGGATGACGAGGAGCATGGACTCCACCTGATGCGCC ACGGCGACGGTGTCAAGGATGTAGCCTTCGAAGTGGAGGATTTGAATGCC ATTTTCACACTGGCCGTGTCCCGTGGGGCCGAAGTGGTCCGCGACATCTG GGAGGAGAGCGATGATCAGGGATTCGTGAGATTCGCTACCATCAAGACGT ACGGCGACACTACCCACACTTTCGTGGAGCGCAATGGGTACGCTGGAGAT TTCCTGCCTGGATTCCAGCGGTCGCCCAAAGATGTCCTTCTAAACGGATT GCCCTCCACCAAGCTGAACTTCATTGATCACGTGGTGGGCAACCAGCCGG ATCTGCAGATGGAGAGCGTGGCCTCCTGGTACGAGAGAATCCTGCAGTTC CACCGCTTCTGGTCCGTGGATGACTCGCAGATTCACACGGAATACTCCGC CCTGCGGTCCATCGTGATGGCAAACTACGAGGAGACGGTGAAGATGCCGA TCAATGAGCCAGCCAATGGGAAAAAGAAGTCACAGATCCAGGAGTACGTG GAGTACTACGGCGGCGGTGGTGTCCAGCACATTGCTCTTAATACGGATGA CATTATCGAGGCGGTGAGCAACCTAAAGGCTCGAGGAACCGAGTTCCTGA CCATCCCATCCTCGTACTACGAGATCCTTCAGGAGCAGCTCTCGCACAGC CGCACCAAGATCAAGGAGGACATGGAGGTCTTGAAGAAGTTGAACATTTT GATTGACTTCGACGAGAACGGATATCTGCTGCAGATCTTCACAAAGAACT GCCAGGATAGACCGACCCTCTTCCTGGAAGTTATCCAACGCTACAATCAC AATGGATTTGGCGCTGGCAACTTTAAGTCCTTGTTCACGGCCATTGAAAT TGAACAAGCCAAGCGAGGAAACTTGTGAATCAAATGTGATCAAATTGAGA ACTAACAAAATCAATAATAAATGAAATGGTCTAAACTGAAAAAAAAAAAA AAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG11796-RB | 1516 | CG11796-RB | 23..1516 | 1..1492 | 7415 | 99.8 | Plus |
CG11796-RA | 1301 | CG11796-RA | 97..1301 | 290..1492 | 5970 | 99.8 | Plus |
CG5872-RA | 2012 | CG5872-RA | 1694..1833 | 1493..1354 | 700 | 100 | Minus |
CG5872-RA | 2012 | CG5872-RA | 1897..2012 | 1354..1239 | 580 | 100 | Minus |
CG11796-RA | 1301 | CG11796-RA | 25..97 | 1..73 | 365 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 20427373..20428028 | 1354..699 | 3280 | 100 | Minus |
chr3L | 24539361 | chr3L | 20428086..20428469 | 699..318 | 1855 | 99.5 | Minus |
chr3L | 24539361 | chr3L | 20428537..20428853 | 317..1 | 1585 | 100 | Minus |
chr3L | 24539361 | chr3L | 20427175..20427309 | 1488..1354 | 675 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 20438364..20439019 | 1354..699 | 3280 | 100 | Minus |
3L | 28110227 | 3L | 20439077..20439460 | 699..318 | 1855 | 99.5 | Minus |
3L | 28110227 | 3L | 20439528..20439844 | 317..1 | 1585 | 100 | Minus |
3L | 28110227 | 3L | 20438161..20438300 | 1493..1354 | 700 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 20431464..20432119 | 1354..699 | 3280 | 100 | Minus |
3L | 28103327 | 3L | 20432177..20432560 | 699..318 | 1865 | 99.4 | Minus |
3L | 28103327 | 3L | 20432628..20432944 | 317..1 | 1585 | 100 | Minus |
3L | 28103327 | 3L | 20431261..20431400 | 1493..1354 | 700 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 20427175..20427309 | 1354..1488 | 100 | <- | Minus |
chr3L | 20427374..20428027 | 700..1353 | 100 | <- | Minus |
chr3L | 20428086..20428469 | 318..699 | 99 | <- | Minus |
chr3L | 20428537..20428853 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RA | 1..1143 | 289..1428 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RA | 1..1143 | 289..1428 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RA | 1..1143 | 289..1428 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RA | 1..1143 | 289..1428 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RA | 1..1143 | 289..1428 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RB | 23..1512 | 1..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RB | 23..1512 | 1..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RB | 29..1518 | 1..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RB | 23..1512 | 1..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG11796-RB | 29..1518 | 1..1488 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20438166..20438300 | 1354..1488 | 100 | <- | Minus |
3L | 20438365..20439018 | 700..1353 | 100 | <- | Minus |
3L | 20439077..20439460 | 318..699 | 99 | <- | Minus |
3L | 20439528..20439844 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20438166..20438300 | 1354..1488 | 100 | <- | Minus |
3L | 20438365..20439018 | 700..1353 | 100 | <- | Minus |
3L | 20439077..20439460 | 318..699 | 99 | <- | Minus |
3L | 20439528..20439844 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20438166..20438300 | 1354..1488 | 100 | <- | Minus |
3L | 20438365..20439018 | 700..1353 | 100 | <- | Minus |
3L | 20439077..20439460 | 318..699 | 99 | <- | Minus |
3L | 20439528..20439844 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 20431266..20431400 | 1354..1488 | 100 | <- | Minus |
arm_3L | 20431465..20432118 | 700..1353 | 100 | <- | Minus |
arm_3L | 20432177..20432560 | 318..699 | 99 | <- | Minus |
arm_3L | 20432628..20432944 | 1..317 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 20431465..20432118 | 700..1353 | 100 | <- | Minus |
3L | 20432177..20432560 | 318..699 | 99 | <- | Minus |
3L | 20432628..20432944 | 1..317 | 100 | Minus | |
3L | 20431266..20431400 | 1354..1488 | 100 | <- | Minus |
Translation from 543 to 1427
> GH03058.pep MRHGDGVKDVAFEVEDLNAIFTLAVSRGAEVVRDIWEESDDQGFVRFATI KTYGDTTHTFVERNGYAGDFLPGFQRSPKDVLLNGLPSTKLNFIDHVVGN QPDLQMESVASWYERILQFHRFWSVDDSQIHTEYSALRSIVMANYEETVK MPINEPANGKKKSQIQEYVEYYGGGGVQHIALNTDDIIEAVSNLKARGTE FLTIPSSYYEILQEQLSHSRTKIKEDMEVLKKLNILIDFDENGYLLQIFT KNCQDRPTLFLEVIQRYNHNGFGAGNFKSLFTAIEIEQAKRGNL*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24132-PA | 402 | GF24132-PA | 109..402 | 1..294 | 1515 | 94.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG13309-PA | 380 | GG13309-PA | 87..380 | 1..294 | 1570 | 99 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH17018-PA | 387 | GH17018-PA | 94..387 | 1..294 | 1463 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hpd-PB | 294 | CG11796-PB | 1..294 | 1..294 | 1532 | 100 | Plus |
Hpd-PA | 380 | CG11796-PA | 87..380 | 1..294 | 1532 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11911-PA | 402 | GI11911-PA | 109..402 | 1..294 | 1487 | 93.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12777-PA | 350 | GL12777-PA | 57..350 | 1..294 | 1503 | 94.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA11203-PA | 381 | GA11203-PA | 88..381 | 1..294 | 1499 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM22213-PA | 380 | GM22213-PA | 87..380 | 1..294 | 1573 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12185-PA | 380 | GD12185-PA | 87..380 | 1..294 | 1571 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13785-PA | 380 | GJ13785-PA | 87..380 | 1..294 | 1490 | 93.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12342-PA | 380 | GK12342-PA | 87..380 | 1..294 | 1476 | 92.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE22742-PA | 380 | GE22742-PA | 87..380 | 1..294 | 1566 | 99 | Plus |
Translation from 543 to 1427
> GH03058.hyp MRHGDGVKDVAFEVEDLNAIFTLAVSRGAEVVRDIWEESDDQGFVRFATI KTYGDTTHTFVERNGYAGDFLPGFQRSPKDVLLNGLPSTKLNFIDHVVGN QPDLQMESVASWYERILQFHRFWSVDDSQIHTEYSALRSIVMANYEETVK MPINEPANGKKKSQIQEYVEYYGGGGVQHIALNTDDIIEAVSNLKARGTE FLTIPSSYYEILQEQLSHSRTKIKEDMEVLKKLNILIDFDENGYLLQIFT KNCQDRPTLFLEVIQRYNHNGFGAGNFKSLFTAIEIEQAKRGNL*