BDGP Sequence Production Resources |
Search the DGRC for GH03119
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 31 |
Well: | 19 |
Vector: | pOT2 |
Associated Gene/Transcript | und-RA |
Protein status: | GH03119.pep: gold |
Preliminary Size: | 1640 |
Sequenced Size: | 1643 |
Gene | Date | Evidence |
---|---|---|
CG4008 | 2001-01-01 | Release 2 assignment |
CG4008 | 2001-07-04 | Blastp of sequenced clone |
CG4008 | 2003-01-01 | Sim4 clustering to Release 3 |
und | 2008-04-29 | Release 5.5 accounting |
und | 2008-08-15 | Release 5.9 accounting |
und | 2008-12-18 | 5.12 accounting |
1643 bp (1643 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047525
> GH03119.complete TCCACAGCACGTTTTACAGCACTGGCCTCTGACACCTCGTGTTTTTGTTC TTTTCTCCGCATCGCCATCGCCAGGCAAGAGTGCGCGCTACATTTTCGTT TATTTCATCGTTCAGCCAGCAACCAAGGCACTGCGAAATGTCTGCAACCG AGACTCTGAATGTGGAGGCGGCAACGCCCGAGATCGGCGAGGAGGTCAAG AAACAAAAGAAGCCCAAGCCGAACAACAAGAAGCTCCGCCAAGAAGCGGC AGCCAAAATAGCCTCCGGAGAAGGCGGCGACGAGGAGCTGACCACAAACG GAGATGCCAAACCGGCAACACCGGCCGCTCAGCCGGCAAAGAAGAAGGGG AACAAGGGCAAGAAAAGCGGTCAGACTGATCCGCCCACCATACCCATTGC TAAGCTTTATCCGGACGGCAACTTCCCCGAGGGCGAGATCGTGGAGCACC CCACGCCCAAGGATATGCCCGACGATCGTACGGCCAAGGACCGATTCACA TCGGAGGAGAAGCGTGCTCTGGACCGTATCAACACGGACATCTACCAGGA ATTGCGCCAGGCGGCTGAGGCCCATCGTCAGACGCGTCAGTATATGCAGC GCTACATTAAGCCGGGCATGACCATGATCCAAATCTGCGAGGAGCTGGAG AACACTGCTCGGCGCCTGATCGGCGAAAATGGTCTGGAGGCTGGTTTGGC CTTCCCGACTGGTTGCTCTCTTAACCATTGCGCCGCCCACTACACGCCCA ATGCCGGAGACCCCACTGTACTGCAGTACGACGATGTGTGCAAGATTGAT TTTGGTACCCATATCAAGGGGCGGATCATTGATTGCGCCTTCACCCTGAC CTTCAACAACAAGTACGACAAGTTGCTGCAGGCCGTCAAGGAGGCCACCA ACACGGGCATCAGAGAGGCGGGCATCGATGTGCGCCTATGCGACATCGGC GCCGCTATCCAGGAGGTCATGGAGTCGTACGAGATCGAGTTGGACGGCAA AACATATCCCATCAAGGCGATTCGCAACTTAAATGGACACTCCATCAGCC CGTACCGCATTCATGCTGGAAAAACGGTGCCCATTGTGAAAGGCGGAGAG TCCACTCGCATGGAGGAGGATGAATTCTACGCCATTGAGACGTTCGGCTC GACGGGTCGCGGTCTGGTCCATGACGATATGGACTGCTCGCATTACATGA AGAACTTTGATCTGCCGTTTGTGCCGCTGCGCCTGCAGTCATCCAAGCAG CTGCTTGGCACCATCAACAAAAACTTCGGCACCCTGGCCTTCTGCAAGCG TTGGCTGGACCGCGCCGGTGCCACGAAGTACCAGATGGCTCTCAAGGATC TGTGCGACAAGGGCATTGTGGAGGCTTATCCGCCGTTGTGCGACATTAAG GGCTGCTACACGGCTCAGTACGAACACACAATTATGCTGCGACCCACCTG CAAAGAAGTCGTTTCCCGTGGCGACGACTACTAGTGGGATGAGGAACTGG ACAGTGACCGATTTTCGGCGATGTATGGCTTGCATTATATACGGTTTTTG ATATAAGTTCATTCTATTGTTGATTTTTTGTGAGCATGCGCCAACCGAAT TATATATACAATGTATTATGCTCAGAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 9762673..9763488 | 242..1057 | 4080 | 100 | Plus |
chr2L | 23010047 | chr2L | 9763609..9764177 | 1057..1625 | 2845 | 100 | Plus |
chr2L | 23010047 | chr2L | 9762331..9762573 | 1..243 | 1215 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 9763834..9764649 | 242..1057 | 4080 | 100 | Plus |
2L | 23513712 | 2L | 9764770..9765340 | 1057..1627 | 2855 | 100 | Plus |
2L | 23513712 | 2L | 9763492..9763734 | 1..243 | 1215 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 9762331..9762573 | 1..243 | 100 | -> | Plus |
chr2L | 9762675..9763487 | 244..1056 | 100 | -> | Plus |
chr2L | 9763609..9764177 | 1057..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 1..1347 | 138..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 1..1347 | 138..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 1..1347 | 138..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 1..1347 | 138..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 1..1347 | 138..1484 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 148..1772 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 148..1772 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 148..1772 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 148..1772 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
und-RA | 124..1748 | 1..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9763492..9763734 | 1..243 | 100 | -> | Plus |
2L | 9763836..9764648 | 244..1056 | 100 | -> | Plus |
2L | 9764770..9765338 | 1057..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9763492..9763734 | 1..243 | 100 | -> | Plus |
2L | 9763836..9764648 | 244..1056 | 100 | -> | Plus |
2L | 9764770..9765338 | 1057..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9763492..9763734 | 1..243 | 100 | -> | Plus |
2L | 9763836..9764648 | 244..1056 | 100 | -> | Plus |
2L | 9764770..9765338 | 1057..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 9763492..9763734 | 1..243 | 100 | -> | Plus |
arm_2L | 9763836..9764648 | 244..1056 | 100 | -> | Plus |
arm_2L | 9764770..9765338 | 1057..1625 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 9763492..9763734 | 1..243 | 100 | -> | Plus |
2L | 9763836..9764648 | 244..1056 | 100 | -> | Plus |
2L | 9764770..9765338 | 1057..1625 | 100 | Plus |
Translation from 137 to 1483
> GH03119.hyp MSATETLNVEAATPEIGEEVKKQKKPKPNNKKLRQEAAAKIASGEGGDEE LTTNGDAKPATPAAQPAKKKGNKGKKSGQTDPPTIPIAKLYPDGNFPEGE IVEHPTPKDMPDDRTAKDRFTSEEKRALDRINTDIYQELRQAAEAHRQTR QYMQRYIKPGMTMIQICEELENTARRLIGENGLEAGLAFPTGCSLNHCAA HYTPNAGDPTVLQYDDVCKIDFGTHIKGRIIDCAFTLTFNNKYDKLLQAV KEATNTGIREAGIDVRLCDIGAAIQEVMESYEIELDGKTYPIKAIRNLNG HSISPYRIHAGKTVPIVKGGESTRMEEDEFYAIETFGSTGRGLVHDDMDC SHYMKNFDLPFVPLRLQSSKQLLGTINKNFGTLAFCKRWLDRAGATKYQM ALKDLCDKGIVEAYPPLCDIKGCYTAQYEHTIMLRPTCKEVVSRGDDY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
und-PC | 448 | CG4008-PC | 1..448 | 1..448 | 2378 | 100 | Plus |
und-PB | 448 | CG4008-PB | 1..448 | 1..448 | 2378 | 100 | Plus |
und-PA | 448 | CG4008-PA | 1..448 | 1..448 | 2378 | 100 | Plus |
CG10576-PD | 391 | CG10576-PD | 58..333 | 171..443 | 233 | 26.9 | Plus |
CG10576-PC | 391 | CG10576-PC | 58..333 | 171..443 | 233 | 26.9 | Plus |
Translation from 137 to 1483
> GH03119.pep MSATETLNVEAATPEIGEEVKKQKKPKPNNKKLRQEAAAKIASGEGGDEE LTTNGDAKPATPAAQPAKKKGNKGKKSGQTDPPTIPIAKLYPDGNFPEGE IVEHPTPKDMPDDRTAKDRFTSEEKRALDRINTDIYQELRQAAEAHRQTR QYMQRYIKPGMTMIQICEELENTARRLIGENGLEAGLAFPTGCSLNHCAA HYTPNAGDPTVLQYDDVCKIDFGTHIKGRIIDCAFTLTFNNKYDKLLQAV KEATNTGIREAGIDVRLCDIGAAIQEVMESYEIELDGKTYPIKAIRNLNG HSISPYRIHAGKTVPIVKGGESTRMEEDEFYAIETFGSTGRGLVHDDMDC SHYMKNFDLPFVPLRLQSSKQLLGTINKNFGTLAFCKRWLDRAGATKYQM ALKDLCDKGIVEAYPPLCDIKGCYTAQYEHTIMLRPTCKEVVSRGDDY*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22806-PA | 444 | GF22806-PA | 1..444 | 1..448 | 2012 | 92.2 | Plus |
Dana\GF21352-PA | 460 | GF21352-PA | 65..460 | 56..448 | 1459 | 68.2 | Plus |
Dana\GF10449-PA | 394 | GF10449-PA | 58..333 | 171..443 | 242 | 27.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG10053-PA | 448 | GG10053-PA | 1..448 | 1..448 | 2381 | 98.4 | Plus |
Dere\GG14116-PA | 391 | GG14116-PA | 58..326 | 171..436 | 238 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH25144-PA | 458 | GH25144-PA | 1..458 | 1..448 | 2008 | 85.4 | Plus |
Dgri\GH15010-PA | 394 | GH15010-PA | 58..333 | 171..443 | 239 | 27.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
und-PC | 448 | CG4008-PC | 1..448 | 1..448 | 2378 | 100 | Plus |
und-PB | 448 | CG4008-PB | 1..448 | 1..448 | 2378 | 100 | Plus |
und-PA | 448 | CG4008-PA | 1..448 | 1..448 | 2378 | 100 | Plus |
CG10576-PD | 391 | CG10576-PD | 58..333 | 171..443 | 233 | 26.9 | Plus |
CG10576-PC | 391 | CG10576-PC | 58..333 | 171..443 | 233 | 26.9 | Plus |
CG10576-PA | 391 | CG10576-PA | 58..333 | 171..443 | 233 | 26.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI20096-PA | 449 | GI20096-PA | 1..449 | 1..448 | 2041 | 89.1 | Plus |
Dmoj\GI13173-PA | 390 | GI13173-PA | 58..324 | 171..436 | 230 | 28.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18932-PA | 429 | GL18932-PA | 1..429 | 1..448 | 1802 | 80.7 | Plus |
Dper\GL16317-PA | 391 | GL16317-PA | 58..333 | 171..443 | 238 | 28.3 | Plus |
Dper\GL24799-PA | 318 | GL24799-PA | 11..260 | 194..443 | 190 | 26.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17851-PA | 461 | GA17851-PA | 1..461 | 1..448 | 2037 | 87.4 | Plus |
Dpse\GA10407-PA | 391 | GA10407-PA | 58..333 | 171..443 | 238 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17682-PA | 448 | GM17682-PA | 1..448 | 1..448 | 2413 | 100 | Plus |
Dsec\GM13901-PA | 391 | GM13901-PA | 58..326 | 171..436 | 237 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23627-PA | 448 | GD23627-PA | 1..448 | 1..448 | 2413 | 100 | Plus |
Dsim\GD13178-PA | 391 | GD13178-PA | 58..326 | 171..436 | 236 | 28.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ13491-PA | 456 | GJ13491-PA | 1..456 | 1..448 | 2023 | 86.2 | Plus |
Dvir\GJ11948-PA | 394 | GJ11948-PA | 17..333 | 135..443 | 236 | 25.7 | Plus |