BDGP Sequence Production Resources |
Search the DGRC for GH03163
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 31 |
Well: | 63 |
Vector: | pOT2 |
Associated Gene/Transcript | cindr-RH |
Protein status: | GH03163.pep: gold |
Preliminary Size: | 3441 |
Sequenced Size: | 2303 |
Gene | Date | Evidence |
---|---|---|
CG31012 | 2000-02-14 | Blastp of sequenced clone |
CG1408 | 2001-01-01 | Release 2 assignment |
CG15544 | 2001-01-01 | Release 2 assignment |
CG31012 | 2003-01-01 | Sim4 clustering to Release 3 |
CG31012 | 2008-04-29 | Release 5.5 accounting |
CG31012 | 2008-08-15 | Release 5.9 accounting |
CG31012 | 2008-12-18 | 5.12 accounting |
2303 bp (2303 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145614
> GH03163.complete ATTTACGTTATTGAAATATTTTCGTCGTCGCGGCAAAACGGCGAGGAGTA ATCGGTAATCATTTTTCTTGGCTCACTGTGTTGCACCGATCAACGAGCCA CCGAGTGCCACACAGATTACGCAGAATCAGAGGAAGGTCAGCAACACCGC CAGCACCACCAGCCACATGACCACAACGAACTCAAGCAATTCCAGCACCA CCTCGGTGACCACGCAGCAGCAGAAGGAGCAGATCGGAGGCAGTTCCTCC ACCACATCGAAGGTGTACATCAAGAAGACCGGGAGCAGTAGCAATAGCAC TACCAGCAGCACCACCACAGCTTCCTCTTCGGCGGGTCGCAAGGAGAGCT TTGGTTCCCGTGACTCCCTGAACGATATCCTTAGTGAAACGGGTCTGCCC ACCGGCAATGTGGCTGCCCAAAGGAAATCCCTGGAGAACAAGAACCTGGA CCTGACTAAGCCACCTGGAGTGGGAGCATCAGTGTCCATTGGACAGCAGC GGAGCAGCACCTCTAGTGCCACCACCTCCTCAGCCACTACAGTAGCCACT GGACTAACCTCATCATCAGTGAGCAAGTCCATGGAGAACATGCTGGACGA GAAGGTCAAGTCGCCACCACCGCCGGTGCTCAGCAAGAAGCCCAGTGTGC CGCTCAAGAAAACTCCCACCGGCGGAGTTCCTATGACTGGTAACCTTTTG GGCGGCAAGAAAAAGAATACCGAGGGAAAGCTCACCACTGCCGTGTCCCA TGATTTGGCGGATGGTCTTGCGGCCAGCAAGATGCTTTCAGGTGCTAATC AACTACCTGAATCTGGAGCAGCTGGCAATGTGGTGATCCGGAGAGCTGCC ACGATTGCAGTGGAGGATACAGATTTCGATCGCGTGGAGAGGGCTTCCAT ACTCACGGATATGCGGCAAGGAAGGGTCAAGGCGCCAAAGAGACGTCCAC CATCGGCGGCTATCAATGTGCTGGGCGAAAGTAATAACAATTCCGTATAT GTAAATGGCAGTGGAATGTCCGGATCTGGTGGAGCAGGAAGTGCCAGTGA GTTGAGTGAAGATGGCGGTGCTGGAGGGAAGACTTCTGATGACAATTCCA CCGGCGAGGAACCACAGTTGGCCAAACCCAAGCCACGTGAGTGGGAGAAG AAGAAGGCGCCTTGGATGGAGGAGCTGAAGGCCTCGCAGGTCACCAGGAA AAAGACCTCACCCAGTGTGGAGCCACGAGGAGCTTCGGTGGCCGAAAGGA CATCCAAACTCTTTGCGGCCGAGCAAGCTGTCAGCAGCAATAGCAGCAGT ATCACAACGAAAGTCCAATCTTCAGCGGTGACCTCCTCCATGTTTGTGGA GAACTCAACGACCAGCAGCTCGGTGATCACCAGTAGCTCCCACACCACCA CCAACGATGCCATCATGTCGCGCAGCTTGTCGGCTGCCAAAGTCCAAACC GCCAGCAGCGACGAGGAGACGAGAGCCACAAGGCCAAACAGTCTAGCTAT ACGAAATCAACGAAGTGTTTCGCCTCTGGTAAAGAGCTCCAATGCCAGCA GCTCGCAGTCCCAGGAGGAGAAGCCCACCAGCCAGCTGAACAACCACCAG GATGCCAGTTCCTCAAGGGTGGCCCAATTGGAGCAACGGGTGGATAAGCT GGAGGGGCTGGTGCTAAACCAACAGCGAACCATTGAGGAGCTGGTAAATG CCCTGAAATCGGAAGCTGAACGCGTCAAGATTTTGAGGAGCGAACTGGAC AAATACGCGCAGTGCGTGACGCAAGTTTGAGCCTAGTTGAATCGCCTTTT AGCTAGCTTTTGAATACTTGATTTTTAGCGTCTGCTGAACTCTACAATAT ACCCAGGCCTAAAAGCGTAGAACGTAGTAGAGTAGAGACCGAACCCAAGA CAATCCCAAATATCTGTACTCTGTGTTCTGTACTTATATACCAGAATGAT CTATCCAAAACCACTAGCGATCAATCGTTTTTGCATGCCAAAACCGTTTC GTTTTTCGCTACAATACTTTGTATTCCCCTGTATATCTGATAATTTCGAT AAGTATTTTTTATACACTCGTACATTCCGAAGAGCAAAAGGGTGTGATTT CTTTTAGCTGCTTTCGATTGCGATTTGTTTTGTTTATTCGATTTATGATT ATTTTTTAAAGATGTATTAAAGTTATGAGTAAACTGTACTATAAACTATA TACCTAACGAGAGAGAAACATACAAAGTTCGATGGAGTCGATGATGATGC CTAAAACTTAAGCAATACCAATAAATAATGCAAATAAAAAAAAAAAAAAA AAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG31012-RB | 2309 | CG31012-RB | 23..2309 | 1..2287 | 11435 | 100 | Plus |
CG31012.d | 3219 | CG31012.d | 1005..3213 | 80..2288 | 11045 | 100 | Plus |
CG31012-RC | 4119 | CG31012-RC | 1753..3961 | 80..2288 | 11045 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 26647393..26648989 | 689..2285 | 7985 | 100 | Plus |
chr3R | 27901430 | chr3R | 26646716..26647327 | 80..691 | 3060 | 100 | Plus |
chr3R | 27901430 | chr3R | 26644934..26645017 | 1..84 | 405 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 30824954..30826553 | 689..2288 | 8000 | 100 | Plus |
3R | 32079331 | 3R | 30824277..30824888 | 80..691 | 3060 | 100 | Plus |
3R | 32079331 | 3R | 30822495..30822578 | 1..84 | 405 | 98.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 30565785..30567384 | 689..2288 | 8000 | 100 | Plus |
3R | 31820162 | 3R | 30565108..30565719 | 80..691 | 3060 | 100 | Plus |
3R | 31820162 | 3R | 30563326..30563409 | 1..84 | 405 | 98.8 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 26644934..26645013 | 1..80 | 100 | -> | Plus |
chr3R | 26646717..26647325 | 81..689 | 100 | -> | Plus |
chr3R | 26647394..26648989 | 690..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31012-RD | 208..1908 | 80..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cindr-RD | 208..1908 | 80..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cindr-RC | 949..2649 | 80..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31012-RD | 208..1908 | 80..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cindr-RC | 949..2649 | 80..1780 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31012-RB | 23..2307 | 1..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cindr-RB | 23..2307 | 1..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cindr-RB | 23..2307 | 1..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG31012-RB | 23..2307 | 1..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
cindr-RB | 23..2307 | 1..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30822495..30822574 | 1..80 | 100 | -> | Plus |
3R | 30824278..30824886 | 81..689 | 100 | -> | Plus |
3R | 30824955..30826550 | 690..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30822495..30822574 | 1..80 | 100 | -> | Plus |
3R | 30824278..30824886 | 81..689 | 100 | -> | Plus |
3R | 30824955..30826550 | 690..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30822495..30822574 | 1..80 | 100 | -> | Plus |
3R | 30824278..30824886 | 81..689 | 100 | -> | Plus |
3R | 30824955..30826550 | 690..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 26648217..26648296 | 1..80 | 100 | -> | Plus |
arm_3R | 26650000..26650608 | 81..689 | 100 | -> | Plus |
arm_3R | 26650677..26652272 | 690..2285 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 30565109..30565717 | 81..689 | 100 | -> | Plus |
3R | 30565786..30567381 | 690..2285 | 100 | Plus | |
3R | 30563326..30563405 | 1..80 | 100 | -> | Plus |
Translation from 166 to 1779
> GH03163.hyp MTTTNSSNSSTTSVTTQQQKEQIGGSSSTTSKVYIKKTGSSSNSTTSSTT TASSSAGRKESFGSRDSLNDILSETGLPTGNVAAQRKSLENKNLDLTKPP GVGASVSIGQQRSSTSSATTSSATTVATGLTSSSVSKSMENMLDEKVKSP PPPVLSKKPSVPLKKTPTGGVPMTGNLLGGKKKNTEGKLTTAVSHDLADG LAASKMLSGANQLPESGAAGNVVIRRAATIAVEDTDFDRVERASILTDMR QGRVKAPKRRPPSAAINVLGESNNNSVYVNGSGMSGSGGAGSASELSEDG GAGGKTSDDNSTGEEPQLAKPKPREWEKKKAPWMEELKASQVTRKKTSPS VEPRGASVAERTSKLFAAEQAVSSNSSSITTKVQSSAVTSSMFVENSTTS SSVITSSSHTTTNDAIMSRSLSAAKVQTASSDEETRATRPNSLAIRNQRS VSPLVKSSNASSSQSQEEKPTSQLNNHQDASSSRVAQLEQRVDKLEGLVL NQQRTIEELVNALKSEAERVKILRSELDKYAQCVTQV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cindr-PJ | 941 | CG31012-PJ | 405..941 | 1..537 | 2621 | 100 | Plus |
cindr-PI | 537 | CG31012-PI | 1..537 | 1..537 | 2621 | 100 | Plus |
cindr-PH | 537 | CG31012-PH | 1..537 | 1..537 | 2621 | 100 | Plus |
cindr-PG | 694 | CG31012-PG | 158..694 | 1..537 | 2621 | 100 | Plus |
cindr-PF | 692 | CG31012-PF | 156..692 | 1..537 | 2621 | 100 | Plus |
Translation from 166 to 1779
> GH03163.pep MTTTNSSNSSTTSVTTQQQKEQIGGSSSTTSKVYIKKTGSSSNSTTSSTT TASSSAGRKESFGSRDSLNDILSETGLPTGNVAAQRKSLENKNLDLTKPP GVGASVSIGQQRSSTSSATTSSATTVATGLTSSSVSKSMENMLDEKVKSP PPPVLSKKPSVPLKKTPTGGVPMTGNLLGGKKKNTEGKLTTAVSHDLADG LAASKMLSGANQLPESGAAGNVVIRRAATIAVEDTDFDRVERASILTDMR QGRVKAPKRRPPSAAINVLGESNNNSVYVNGSGMSGSGGAGSASELSEDG GAGGKTSDDNSTGEEPQLAKPKPREWEKKKAPWMEELKASQVTRKKTSPS VEPRGASVAERTSKLFAAEQAVSSNSSSITTKVQSSAVTSSMFVENSTTS SSVITSSSHTTTNDAIMSRSLSAAKVQTASSDEETRATRPNSLAIRNQRS VSPLVKSSNASSSQSQEEKPTSQLNNHQDASSSRVAQLEQRVDKLEGLVL NQQRTIEELVNALKSEAERVKILRSELDKYAQCVTQV*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF22925-PA | 884 | GF22925-PA | 357..871 | 18..532 | 1704 | 78.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG11778-PA | 895 | GG11778-PA | 367..882 | 17..532 | 2149 | 96.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14216-PA | 951 | GH14216-PA | 397..951 | 32..537 | 1109 | 53.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
cindr-PJ | 941 | CG31012-PJ | 405..941 | 1..537 | 2621 | 100 | Plus |
cindr-PI | 537 | CG31012-PI | 1..537 | 1..537 | 2621 | 100 | Plus |
cindr-PH | 537 | CG31012-PH | 1..537 | 1..537 | 2621 | 100 | Plus |
cindr-PG | 694 | CG31012-PG | 158..694 | 1..537 | 2621 | 100 | Plus |
cindr-PF | 692 | CG31012-PF | 156..692 | 1..537 | 2621 | 100 | Plus |
cindr-PE | 848 | CG31012-PE | 312..848 | 1..537 | 2621 | 100 | Plus |
cindr-PB | 537 | CG31012-PB | 1..537 | 1..537 | 2621 | 100 | Plus |
cindr-PD | 635 | CG31012-PD | 99..635 | 1..537 | 2621 | 100 | Plus |
cindr-PC | 882 | CG31012-PC | 346..882 | 1..537 | 2621 | 100 | Plus |
cindr-PA | 545 | CG31012-PA | 1..536 | 1..536 | 2590 | 99.3 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 539..1019 | 2..488 | 217 | 21.8 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 403..880 | 2..483 | 201 | 20.9 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 594..1081 | 2..483 | 190 | 20 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 336..836 | 2..487 | 187 | 21.3 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 369..846 | 2..483 | 183 | 21.3 | Plus |
Muc68D-PB | 1514 | CG6004-PB | 302..780 | 2..483 | 178 | 20 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 989..1453 | 2..490 | 176 | 20.7 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 659..1133 | 5..490 | 172 | 21.6 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 1379..1853 | 5..490 | 170 | 21.5 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 589..1053 | 2..490 | 169 | 21.3 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 700..1213 | 5..490 | 168 | 21.2 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 1469..1933 | 2..490 | 168 | 21.4 | Plus |
Mur89F-PC | 2158 | CG4090-PC | 548..1008 | 2..486 | 168 | 21 | Plus |
Mur89F-PB | 2159 | CG4090-PB | 548..1008 | 2..486 | 168 | 21 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 380..893 | 5..490 | 167 | 22.1 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 1055..1533 | 4..490 | 166 | 21.2 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 175..653 | 4..490 | 164 | 21.3 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 221..733 | 3..490 | 164 | 21.6 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 780..1293 | 5..490 | 162 | 21.8 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 1100..1613 | 5..490 | 162 | 22 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 1581..2093 | 3..490 | 162 | 21 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 1501..2013 | 3..490 | 161 | 21.7 | Plus |
Muc68Ca-PA | 3135 | CG18331-PA | 1710..2173 | 2..490 | 161 | 20.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22123-PA | 591 | GI22123-PA | 29..582 | 29..536 | 1416 | 61 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL13519-PA | 663 | GL13519-PA | 131..650 | 18..532 | 1565 | 68.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA26879-PE | 561 | GA26879-PE | 22..561 | 18..537 | 1618 | 66.7 | Plus |
Dpse\GA26879-PD | 857 | GA26879-PD | 333..857 | 18..537 | 1585 | 68.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM12908-PA | 774 | GM12908-PA | 361..518 | 17..174 | 601 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD21548-PA | 892 | GD21548-PA | 348..879 | 1..532 | 2658 | 98.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24244-PA | 943 | GJ24244-PA | 371..930 | 26..532 | 1484 | 61.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14156-PA | 879 | GK14156-PA | 353..870 | 32..536 | 1452 | 66 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10904-PA | 903 | GE10904-PA | 359..890 | 1..532 | 2637 | 97.2 | Plus |