Clone GH03217 Report

Search the DGRC for GH03217

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:32
Well:17
Vector:pOT2
Associated Gene/TranscriptCG32095-RA
Protein status:GH03217.pep: gold
Preliminary Size:4600
Sequenced Size:1487

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG32095 2001-09-19 Blastp of sequenced clone
CG32095 2003-01-01 Sim4 clustering to Release 3
CG32095 2008-04-29 Release 5.5 accounting
CG32095 2008-08-15 Release 5.9 accounting
CG32095 2008-12-18 5.12 accounting

Clone Sequence Records

GH03217.complete Sequence

1487 bp (1487 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058280

> GH03217.complete
CTCTGGAATTAATCAACCGCAATTTAAACGATGCGCTGGCCAAGTTGAAA
AACAGCAAACACAATAACTTGCAGGATGTTAAGCTAAAGATGGCCCGCCT
GATACGAATCCACTTGAAGCACGTTGAAACTACTGTGCTCTTGCTCAGGC
GGAGGACGCAGCAGAGGACCAGGCGGCGGTTTAGGATGCTGCGCACGTTT
TTTATGCGCCAGATGATGGAGATGCACTCGAACTACCTGCACACTTACGC
CATGCTGCGCCTGAAGCATTCCCAAGTCGTGGACACGGAATCGGAAACCA
GCGATGTCGATGAAGAACCACACGACAAGATTGGCGTGCCCTGCACCTTT
CCCAGCTTCGATTCCCATTTCTTTGAGCATGTGATTCCCGAGCTGAGCGA
GGAGGACTTTCTCAACACACTCCATGTGACACGGGGAACCTTTGAGACCT
TGTGCAAGCAACTTTCTCCCACTCTGCGGACGTCAGATGAACTGACTCAA
AGAGAGCCAGCAATTTCTACCGAAAAGTGTGTGGCTCTGGCTCTGAACTT
CCTGGCCAGCGGCGAGCGGCTCTCTTTGATTGCCGAGAGATTTTCTCTGC
CCCGTCCAAGGACCATCAAGTGTTTAAAGGTCTTTTGCAACGCCGTTATG
TCCACTTTGGGGCGGGCGCTTCGCCAATTGCCCCAGAATCCAGTGGACTG
CAATAGTGTGGCCAAGGGGTTCCAGCGTGAAAGCAACATGCCCGCCGCAC
TCGTCGGCGTCCTTGGCGTCTGCTCCATTCCCATCCGATCCACTGGCGAG
GCCAAGAACTCGATACTGCGCATGGAGTATCTGCTCGACGATCGAATGCT
CTTTCGGGAGCTGCAATTGGGATGTGGCTTGCGTGCCACCCTGGGACCCA
TGTTTTCCCACGCACCCAATACTCTTACCGCAATCCCTGAATTCCGCATT
AATTCCCGACTAGTTCCGGCCTTTGTCTTGGCCCCGGTGTACCAGAATTA
TCCACTGCGTCCCTGGCTTTTGCAGCGCTATACTGATCCGACAGCTCCGC
ACGAGCACGACTTCAACGAGGTTGCCGAGCACCTGCAGGAATTGAGTGAC
TGCGCACTGCATCGCCTCATGTCCCGCTGGAGCTTCCTTAGCCAACCCCT
GGACATTAGCTTCCATACGGCCTCGTGCATCATCACAGCAGCCGCAGTAT
TGCACAATCTACTGGAAGAACTGAGCGAACCACACATGCTTGAGTGGGGC
AACTCGGTGGACGTGTCCAAATTCCGGGCAGAGCCGCTGTCAGATTCAGT
CAGCGAGGACGCCGAGTCTCATGCGGCGCTAGAAGTGAGAGATTTCCTAG
CCAGAACTATAAGCTCCACTGAAATATAAGGCATAGAAATCGATGTGCAA
CCACCGACTTCTCATATACATAAATACTGTAGAGATAAGGACTAAAATAA
AACCAAATTAAGTTACATTAAAAAAAAAAAAAAAAAA

GH03217.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:24:32
Subject Length Description Subject Range Query Range Score Percent Strand
CG32095-RA 1467 CG32095-RA 1..1467 3..1469 7335 100 Plus
RpL10Ab-RA 949 RpL10Ab-RA 888..949 1476..1415 295 98.3 Minus
Blast to d_melanogaster_OreR.fa performed 2019-03-15 17:09:11
Subject Length Description Subject Range Query Range Score Percent Strand
chr3L 24539361 chr3L 11815060..11816526 1469..3 7335 100 Minus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:29:21 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 17:09:09
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11824200..11825673 1476..3 7355 99.9 Minus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:47:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28103327 3L 11817300..11818773 1476..3 7355 99.9 Minus
Blast to na_te.dros performed on 2019-03-15 17:09:09 has no hits.

GH03217.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 17:10:01 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
chr3L 11815060..11816526 1..1469 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:10:07 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 1..1290 90..1379 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:10:01 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 1..1290 90..1379 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 02:27:51 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 1..1290 90..1379 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:40:54 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 1..1290 90..1379 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 21:27:22 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 1..1290 90..1379 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:01:02 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 1..1464 3..1466 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:10:01 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 1..1467 3..1469 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 02:27:51 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 58..1526 1..1469 99   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:40:54 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 1..1464 3..1466 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 21:27:22 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
CG32095-RA 58..1526 1..1469 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:10:01 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11824207..11825673 1..1469 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:10:01 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11824207..11825673 1..1469 99   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 17:10:01 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11824207..11825673 1..1469 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 02:27:51 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11817307..11818773 1..1469 99   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:18:27 Download gff for GH03217.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11817307..11818773 1..1469 99   Minus

GH03217.hyp Sequence

Translation from 2 to 1378

> GH03217.hyp
LELINRNLNDALAKLKNSKHNNLQDVKLKMARLIRIHLKHVETTVLLLRR
RTQQRTRRRFRMLRTFFMRQMMEMHSNYLHTYAMLRLKHSQVVDTESETS
DVDEEPHDKIGVPCTFPSFDSHFFEHVIPELSEEDFLNTLHVTRGTFETL
CKQLSPTLRTSDELTQREPAISTEKCVALALNFLASGERLSLIAERFSLP
RPRTIKCLKVFCNAVMSTLGRALRQLPQNPVDCNSVAKGFQRESNMPAAL
VGVLGVCSIPIRSTGEAKNSILRMEYLLDDRMLFRELQLGCGLRATLGPM
FSHAPNTLTAIPEFRINSRLVPAFVLAPVYQNYPLRPWLLQRYTDPTAPH
EHDFNEVAEHLQELSDCALHRLMSRWSFLSQPLDISFHTASCIITAAAVL
HNLLEELSEPHMLEWGNSVDVSKFRAEPLSDSVSEDAESHAALEVRDFLA
RTISSTEI*

GH03217.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:34:24
Subject Length Description Subject Range Query Range Score Percent Strand
CG32095-PA 429 CG32095-PA 1..429 30..458 2219 100 Plus

GH03217.pep Sequence

Translation from 89 to 1378

> GH03217.pep
MARLIRIHLKHVETTVLLLRRRTQQRTRRRFRMLRTFFMRQMMEMHSNYL
HTYAMLRLKHSQVVDTESETSDVDEEPHDKIGVPCTFPSFDSHFFEHVIP
ELSEEDFLNTLHVTRGTFETLCKQLSPTLRTSDELTQREPAISTEKCVAL
ALNFLASGERLSLIAERFSLPRPRTIKCLKVFCNAVMSTLGRALRQLPQN
PVDCNSVAKGFQRESNMPAALVGVLGVCSIPIRSTGEAKNSILRMEYLLD
DRMLFRELQLGCGLRATLGPMFSHAPNTLTAIPEFRINSRLVPAFVLAPV
YQNYPLRPWLLQRYTDPTAPHEHDFNEVAEHLQELSDCALHRLMSRWSFL
SQPLDISFHTASCIITAAAVLHNLLEELSEPHMLEWGNSVDVSKFRAEPL
SDSVSEDAESHAALEVRDFLARTISSTEI*

GH03217.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:33:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF20104-PA 436 GF20104-PA 1..436 4..429 1471 68.3 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG13882-PA 462 GG13882-PA 34..462 1..429 1998 91.8 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:33:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH14797-PA 404 GH14797-PA 1..404 34..429 1323 62.7 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 11:04:51
Subject Length Description Subject Range Query Range Score Percent Strand
CG32095-PA 429 CG32095-PA 1..429 1..429 2219 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI11852-PA 468 GI11852-PA 38..468 1..429 1331 59.8 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:33:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL20724-PA 459 GL20724-PA 39..459 1..429 1396 63.4 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA16674-PA 459 GA16674-PA 39..459 1..429 1401 63.6 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:33:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM24704-PA 429 GM24704-PA 1..429 1..429 2059 95.3 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:33:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD12772-PA 410 GD12772-PA 34..405 1..372 1794 95.7 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ13550-PA 472 GJ13550-PA 38..472 1..429 1309 61.4 Plus
Dvir\GJ14048-PA 359 GJ14048-PA 15..354 94..429 154 25.8 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:33:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK25178-PA 477 GK25178-PA 35..477 1..429 1406 62.4 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE20175-PA 429 GE20175-PA 1..429 1..429 1993 92.3 Plus