Clone GH03322 Report

Search the DGRC for GH03322

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:33
Well:22
Vector:pOT2
Associated Gene/TranscriptCG42259-RA
Protein status:GH03322.pep: gold
Sequenced Size:832

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG42259-RA 2009-04-16 Manual selection by Sue Celniker

Clone Sequence Records

GH03322.complete Sequence

832 bp assembled on 2013-02-04

GenBank Submission: BT150073.1

> GH03322.complete
AAATCTACATCTTGGACCAACACTTCGAGCGAGGGAAGTCCAAAATGTAG
GAGTTCGATGCTCTATTGGTGTTTATAATTTTATGTATTTTGTGTAAAAG
TAACCTATGTATAAATCCGTGTAAGTAGCTTTACGATCTGGAAATTCCGT
ATTACGCCAGTGTTCAGATTCTTCCTGCCCACTGCGCACAGTGGGTATAA
AAGCGCGGTGGCAGTGAGCTCATCGATTCAGTTTAATTTGGATGCTCCGC
ACGACTCGACGATGCTTCACTCAAACTATCTTTTTCTGATCGGCGGTTGC
TGCCTGGTTTTCGCTGTCTCAGCGCAGATTCCCATCACGCCGCGACGTTG
CCCGGCGAACGAGACTTTCCTGGCCTGTGGTCCCGATTGTCAAACGGAGT
GCGCCACGCTAGGAAAGCCCTGTCTGGTCAGGCACATCCGATGTCCAGAT
GGATGCTACTGCAACAAGGGCTTCGCGAGGAACGCCGCGGGCACGTGCAT
CCCCCTTCGGCGGTGCAACGAAGGCGGCTACGGAAACTGAATTAACTGAG
CATACTGTCAAATTAGAAGCAGCTGAAACACTGAAAATGGCAAGACAATA
AAGTTCACTGGCATTGTGTATGGCGCCTACAATGCAATGATAATGAGGCC
ACAGCATGGCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH03322.complete Blast Records

Blast to d_melanogaster_OreR.fa performed 2019-03-15 14:14:18
Subject Length Description Subject Range Query Range Score Percent Strand
chrX 22417052 chrX 940208..940544 1..337 1685 100 Plus
chrX 22417052 chrX 940620..940944 338..662 1610 99.7 Plus
Blast to na_all.dmel.RELEASE6 performed 2019-03-15 14:14:16
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1046224..1046560 1..337 1685 100 Plus
X 23542271 X 1046636..1046963 338..665 1640 100 Plus
Blast to na_te.dros performed 2019-03-15 14:14:17
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\Tom 7060 Dana\Tom DNTOMRETA 7060bp Derived from Z24451 (Rel. 44, Last updated, Version 6). 6110..6174 127..62 120 66.7 Minus
Dbif\P-element_O 2986 Dbif\P-element_O P_O 2986bp Derived from X71634. 2769..2801 88..56 111 81.8 Minus

GH03322.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-15 14:14:58 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
chrX 940208..940544 1..337 100 -> Plus
chrX 940620..940944 338..662 99   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2013-04-26 11:15:58 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
CG42259-RA 1..279 262..540 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 00:25:12 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
CG42259-RA 1..279 262..540 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-26 20:55:54 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
CG42259-RA 1..279 262..540 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2013-04-26 11:15:58 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
CG42259-RA 1..662 1..662 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 00:25:12 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
CG42259-RA 1..662 1..662 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 20:55:54 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
CG42259-RA 1..662 1..662 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:14:58 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
X 1046224..1046560 1..337 100 -> Plus
X 1046636..1046960 338..662 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:14:58 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
X 1046224..1046560 1..337 100 -> Plus
X 1046636..1046960 338..662 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-15 14:14:58 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
X 1046224..1046560 1..337 100 -> Plus
X 1046636..1046960 338..662 100   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 00:25:12 Download gff for GH03322.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 940257..940593 1..337 100 -> Plus
arm_X 940669..940993 338..662 100   Plus

GH03322.hyp Sequence

Translation from 261 to 539

> GH03322.hyp
MLHSNYLFLIGGCCLVFAVSAQIPITPRRCPANETFLACGPDCQTECATL
GKPCLVRHIRCPDGCYCNKGFARNAAGTCIPLRRCNEGGYGN*

GH03322.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 17:43:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG42259-PB 92 CG42259-PB 1..92 1..92 530 100 Plus
CG42259-PA 92 CG42259-PA 1..92 1..92 530 100 Plus

GH03322.pep Sequence

Translation from 261 to 539

> GH03322.pep
MLHSNYLFLIGGCCLVFAVSAQIPITPRRCPANETFLACGPDCQTECATL
GKPCLVRHIRCPDGCYCNKGFARNAAGTCIPLRRCNEGGYGN*

GH03322.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:13:28
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF22128-PA 93 GF22128-PA 20..90 19..89 289 74.6 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:13:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG12828-PA 93 GG12828-PA 1..93 1..92 332 74.2 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:13:29
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH11993-PA 90 GH11993-PA 2..87 4..87 258 61.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:33:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG42259-PB 92 CG42259-PB 1..92 1..92 530 100 Plus
CG42259-PA 92 CG42259-PA 1..92 1..92 530 100 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:13:30
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI15615-PA 96 GI15615-PA 23..92 20..89 296 75.7 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:13:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA22705-PA 91 GA22705-PA 12..91 8..87 286 63.7 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:13:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM19112-PA 92 GM19112-PA 1..92 1..92 447 93.5 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:13:31
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD24198-PA 97 GD24198-PA 1..74 1..74 363 93.2 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:13:32
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\GJ15220-PA 94 GJ15220-PA 23..90 22..89 264 72.1 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:13:33
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE16660-PA 93 GE16660-PA 1..93 1..92 363 74.2 Plus