BDGP Sequence Production Resources |
Search the DGRC for GH03475
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 34 |
Well: | 75 |
Vector: | pOT2 |
Associated Gene/Transcript | CG4390-RA |
Protein status: | GH03475.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1022 |
Gene | Date | Evidence |
---|---|---|
CG4390 | 2001-01-01 | Release 2 assignment |
CG4390 | 2002-05-15 | Blastp of sequenced clone |
CG4390 | 2003-01-01 | Sim4 clustering to Release 3 |
CG4390 | 2008-04-29 | Release 5.5 accounting |
CG4390 | 2008-08-15 | Release 5.9 accounting |
CG4390 | 2008-12-18 | 5.12 accounting |
1022 bp (1022 high quality bases) assembled on 2002-05-15
GenBank Submission: AY118729
> GH03475.complete CACACTGTTTTCTTATCGCTTGTTATTTTTAGATCGTCAAAAAACAAAAC ATGACGCTCGAACAGCTGTCCGCAAATAAGTGCTTCGAGGGCGAGCAACG CGTGTATCGCCATCGCTCGGACACCTTGAAGTGCGACATGACCTTTGGCG TCTTCCTGCCGCCGGCCGCTTTGGAGGGTAAACCGTGTCCGGTGCTGTTC TTCCTCAGCGGACTGACCTGCACGCATGAGAACTTCATCCAGAAGAGCGG ATTCCAGCAGCACGCCGCCCGCCACAACCTGATCGTCGTCAATCCGGACA CTTCGCCCAGGGGCGTGGAAATTGCCGGCCAAGATGATGCATACGACTTT GGAAGCGGGGCTGGATTCTATGTGGATGCAAAGGAGGAGCCGTGGTCGAA GCACTACAAGATGTACAGCTATGTGACCCAGGAGCTGGTGGATGTGGTCA ATGCCAATCTGCCCGTGGTTCCCGGTAAACGCGGTATATTCGGCCACAGT ATGGGCGGCCACGGAGCCCTGATCTGCGCGCTTAAGAATCCCGGGCTGTA CCAGTCGGTGTCCGCTTTTGCGCCGATTGCCAATCCCACCGAGTGCCCGT GGGGCAAGAAGGCCTTTGCCGGCTATCTGGGCTCCAATCCGGATGACTGG GCCCTGTGGGATGCCACGCATCTGGTGTCGCAGTACGAGAGCACTCCGCA GGAGCTCTTCATCGACCAAGGTGCAGCAGACAACTTCCTGGCCGGCAAGC AGCTGCTGCCGGAGAACCTGCTGGCTGCCGCAGATGGCAATGATCACATC CAGACCATCTTCAAGCAGCGCGAGGGATACGATCACAGCTACTTCTACAT CGCCACGTTCGTCGCCGAACACATCGCCTACCATGCCGCCCTGCTCACAG CTTCCGCTTGATGATATTCCGCTTGTACATAATCGTTGGTTTCCACCGAA ACCATAATTCAACGTAAATTTGGCAGTAAATAAACCAATTTCGACTGAGC TTCTAAAAAAAAAAAAAAAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 15880361..15881317 | 48..1004 | 99 | <- | Minus |
chr3R | 15881385..15881432 | 1..47 | 97 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 130..993 | 48..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 130..993 | 48..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 130..993 | 48..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 130..993 | 48..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RB | 130..993 | 48..911 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RA | 28..1031 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RA | 28..1031 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RA | 28..1031 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RA | 28..1031 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG4390-RA | 3..1006 | 1..1004 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20056418..20057374 | 48..1004 | 100 | <- | Minus |
3R | 20057442..20057488 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20056418..20057374 | 48..1004 | 100 | <- | Minus |
3R | 20057442..20057488 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 20056418..20057374 | 48..1004 | 100 | <- | Minus |
3R | 20057442..20057488 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 15882140..15883096 | 48..1004 | 100 | <- | Minus |
arm_3R | 15883164..15883210 | 1..47 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19797249..19798205 | 48..1004 | 100 | <- | Minus |
3R | 19798273..19798319 | 1..47 | 100 | Minus |
Translation from 50 to 910
> GH03475.pep MTLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGKPCPVLF FLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDF GSGAGFYVDAKEEPWSKHYKMYSYVTQELVDVVNANLPVVPGKRGIFGHS MGGHGALICALKNPGLYQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDW ALWDATHLVSQYESTPQELFIDQGAADNFLAGKQLLPENLLAAADGNDHI QTIFKQREGYDHSYFYIATFVAEHIAYHAALLTASA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17336-PA | 327 | GF17336-PA | 44..327 | 1..285 | 1292 | 83.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15619-PA | 330 | GG15619-PA | 45..330 | 1..286 | 1491 | 95.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH23926-PA | 285 | GH23926-PA | 1..285 | 1..284 | 1299 | 83.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG4390-PA | 286 | CG4390-PA | 1..286 | 1..286 | 1541 | 100 | Plus |
CG4390-PB | 330 | CG4390-PB | 45..330 | 1..286 | 1541 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI10052-PA | 285 | GI10052-PA | 1..285 | 1..284 | 1285 | 82.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL12516-PA | 338 | GL12516-PA | 51..336 | 1..285 | 1285 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA27533-PA | 338 | GA27533-PA | 51..336 | 1..285 | 1287 | 82.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM17704-PA | 328 | GM17704-PA | 45..328 | 1..284 | 1520 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20081-PA | 328 | GD20081-PA | 45..328 | 1..284 | 1528 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23787-PA | 285 | GJ23787-PA | 1..285 | 1..284 | 1249 | 80 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22793-PA | 285 | GK22793-PA | 1..285 | 1..284 | 1324 | 83.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE25088-PA | 330 | GE25088-PA | 45..330 | 1..286 | 1501 | 96.9 | Plus |
Translation from 50 to 910
> GH03475.hyp MTLEQLSANKCFEGEQRVYRHRSDTLKCDMTFGVFLPPAALEGKPCPVLF FLSGLTCTHENFIQKSGFQQHAARHNLIVVNPDTSPRGVEIAGQDDAYDF GSGAGFYVDAKEEPWSKHYKMYSYVTQELVDVVNANLPVVPGKRGIFGHS MGGHGALICALKNPGLYQSVSAFAPIANPTECPWGKKAFAGYLGSNPDDW ALWDATHLVSQYESTPQELFIDQGAADNFLAGKQLLPENLLAAADGNDHI QTIFKQREGYDHSYFYIATFVAEHIAYHAALLTASA*