BDGP Sequence Production Resources |
Search the DGRC for GH03502
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 35 |
Well: | 2 |
Vector: | pOT2 |
Associated Gene/Transcript | Ppcs-RA |
Protein status: | GH03502.pep: gold |
Preliminary Size: | 2160 |
Sequenced Size: | 2174 |
Gene | Date | Evidence |
---|---|---|
CG5629 | 2000-02-14 | Blastp of sequenced clone |
CG5629 | 2003-01-01 | Sim4 clustering to Release 3 |
CG5629 | 2008-04-29 | Release 5.5 accounting |
CG5629 | 2008-08-15 | Release 5.9 accounting |
CG5629 | 2008-12-18 | 5.12 accounting |
2174 bp (2174 high quality bases) assembled on 2000-02-14
GenBank Submission: AF132150
> GH03502.complete CCAACGCGTTTTTTTTTTTTGGCCTGCACTTTGAACCCCGAGGTTTCGTG CGAATAAAGATACGGATTTGAGTGCGCCTGTCCACATTCCCGCTCGTCCC GCTCCGCCATCCATCGCTGCCTATCGCATTTTCGGTTCAGAATCCCGCGG ACCTTGCTGCCGTGCACATCGCATCGCATTTCCACAGCTGCGTTTTTCAG CATTTTCGTTCGCTCTCTCTCTCTCCGGTTTTTCAGAGCGCTCCGTTCCG CTCTCCCGCTCGCGCGCGCTCCCCTTAACGGTTCCATTGATAAGCAGCGC CACCCGCAGCCCCTGCCCCGCCCCCCTGCCACGCATATTCCGCCCTTCGC ATTTCGGAAACTGCAAAAAAAAACCAAACCAAAGCAAAGCAAAAGCAAAT CAATCAATTAAGATAGTACGCCGAATAGTGCAGTGCGTGTGTTAATTAAT TTTGGTTGCCATTTCGCACATTCTGTATTTATTAATTGGCAGTGCATAGC TTCCGGCGGAAGAGGGCAACTTTCCGTTCATTTTCGAGCTTCCGTTTGTC GGCCAATTAGCAGCAGGTCGACAAAGAAAAAGCAAAAACAAGCGTAAAGG ATAAGCCAACATGACGCACTGGGAGGACTTCTACAACACGCACCTGCCGC CCGCGGACTTCGAGGACAATCGCTCCCTGCTCAAGGAGTTCTGCGAACGG CACAACAAGCTCCAGAATCGCATCGTCCTCGTCACGTCCGGTGGCACCAC AGTTCCCCTGGAGCACAATACGGTGCGGTTTGTGGACAATTTTAGTGCTG GAACGCGTGGCTCCGCCTCGGCGGAATACTTCCTCGACCACGACTATGCC GTGATTTTCATGCATCGCCACAAGTCGCTGGAGCCCTTCACGCGCCACTT CACCGGCCAGCAGTTCTTCGACATGCTGGACATTGCGGACAACAGCCAGA GTTCGACGATAGCCATCAAACCGGATTCGGTGGACGTGTTTGCTCCGGTG CTGGCCAAATACAAGATAGCCCGCGAAACGCAGATGATCCTGTACGTGAA CTTCACCAGCGTGGTGGACTACATGTGGCTGCTCCGCGCCGCCTGCGAGT GCCTGGCCGCCTTCGAGGAGCGAGCCGTGCTCTACCTAGCCGCAGCCGTA TCCGATTTCTACATACCCGAGGACATGATGCCCACCCACAAAATGCAATC AGGAGATGGAGCGCCGACGATTTCGCTGCAGCTGGTGCCAAAAATGCTGG CCCCCCTCGCCAGTTTGTGGGTCCCGCACGCCTTTGTGGTGTCCTTTAAA CTGGAAACGGACGAGAGCCTATTGATTGTGAAGGCACGTGACAGTCTCAA CAAATACAAGCACAAGCTGGTCATTGCCAATGTGCTGCAGACACGCAAGC ATCGCGTGGTGTTCGTCACGCCCACAGATTCCTACGAGCTGCATTTGACT CGCGAACAGACGCTGCAAGGACTCGAGATCGAGGAGCCCATCGTGGCCGA TGTGGTGCAAAAGCACGGCGAGTTCATCAGTAACGCTCAACAGCGCCAAT GACCGTTGTCGATGCGCCGGAGGCCACAGACGCAGCATCAGCAGCACCAC CACCAACAACTGGCCACCGGTGACGAGGACGAGGATGGCGGCGATCTTGA TCGGGATCCATATTGCGTGACCAGCTCGCATTATTGCCGTGTTCTGAATC CGGGCACGCCAGGCTTTGCCCGCAAATATTGAGCAGGTTATAGTCCATAG TGTATACTGGCATGTGGATGACAGACATTTACATTCGATTCATCCTTGCC CTTGGACTTTGAGTTCCCGCCACAATTTAGCTATCTATTTATGGTCGCGC CTCATAATTGAGGTGGCACCGCTCCATTAGTCCATTATCCTGTTGTTATT ATTATTTTGGTATTAGTTAATGTATTGGCCCTATTGTTGTCCTGAGAAAT GATGTCACTTGTATGTATCCGCCATTCCCTTGGCTCCTTTTCTTATCTTC CTTTGTCTGCCGGCACGTTTATGTCATCGAGTATACGCAGCGTGTTGCGC AGACATCAATAAGCGATTTTGATTTATGTTTGTGACAGAGCTTATGATGC TTATACATTTAATGAAGCATCGATCGATCCGGCGAACTGGAATTTAAATC CCAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 14971113..14971847 | 736..1 | 3540 | 99 | Minus |
chr3R | 27901430 | chr3R | 14964981..14965629 | 2152..1504 | 3245 | 100 | Minus |
chr3R | 27901430 | chr3R | 14969459..14969903 | 1180..736 | 2180 | 99.3 | Minus |
chr3R | 27901430 | chr3R | 14966073..14966259 | 1366..1180 | 935 | 100 | Minus |
chr3R | 27901430 | chr3R | 14965864..14966005 | 1506..1365 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 19147135..19147870 | 736..1 | 3680 | 100 | Minus |
3R | 32079331 | 3R | 19140995..19141644 | 2153..1504 | 3250 | 100 | Minus |
3R | 32079331 | 3R | 19145481..19145925 | 1180..736 | 2225 | 100 | Minus |
3R | 32079331 | 3R | 19142088..19142274 | 1366..1180 | 935 | 100 | Minus |
3R | 32079331 | 3R | 19141879..19142020 | 1506..1365 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 18887966..18888701 | 736..1 | 3680 | 100 | Minus |
3R | 31820162 | 3R | 18881826..18882475 | 2153..1504 | 3250 | 100 | Minus |
3R | 31820162 | 3R | 18886312..18886756 | 1180..736 | 2225 | 100 | Minus |
3R | 31820162 | 3R | 18882919..18883105 | 1366..1180 | 935 | 100 | Minus |
3R | 31820162 | 3R | 18882710..18882851 | 1506..1365 | 710 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2267..2397 | 1476..1610 | 125 | 57 | Plus |
HMS-Beagle | 7062 | HMS-Beagle Beagle 7062bp | 1177..1228 | 1873..1926 | 120 | 76.4 | Plus |
invader3 | 5484 | invader3 INVADER3 5484bp | 5044..5084 | 1925..1884 | 117 | 78.6 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 14964981..14965628 | 1505..2152 | 100 | <- | Minus |
chr3R | 14965866..14966003 | 1367..1504 | 100 | <- | Minus |
chr3R | 14966073..14966258 | 1181..1366 | 100 | <- | Minus |
chr3R | 14969459..14969902 | 737..1180 | 99 | <- | Minus |
chr3R | 14971113..14971847 | 1..736 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5629-RB | 1..942 | 611..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcs-RA | 1..942 | 611..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcs-RC | 1..1122 | 611..1732 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5629-RB | 1..942 | 611..1552 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcs-RC | 1..1122 | 611..1732 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5629-RB | 38..2189 | 1..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcs-RA | 38..2189 | 1..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcs-RA | 41..2192 | 1..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG5629-RB | 38..2189 | 1..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ppcs-RA | 41..2192 | 1..2152 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19140996..19141643 | 1505..2152 | 100 | <- | Minus |
3R | 19141881..19142018 | 1367..1504 | 100 | <- | Minus |
3R | 19142088..19142273 | 1181..1366 | 100 | <- | Minus |
3R | 19145481..19145924 | 737..1180 | 100 | <- | Minus |
3R | 19147135..19147870 | 1..736 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19140996..19141643 | 1505..2152 | 100 | <- | Minus |
3R | 19141881..19142018 | 1367..1504 | 100 | <- | Minus |
3R | 19142088..19142273 | 1181..1366 | 100 | <- | Minus |
3R | 19145481..19145924 | 737..1180 | 100 | <- | Minus |
3R | 19147135..19147870 | 1..736 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 19140996..19141643 | 1505..2152 | 100 | <- | Minus |
3R | 19141881..19142018 | 1367..1504 | 100 | <- | Minus |
3R | 19142088..19142273 | 1181..1366 | 100 | <- | Minus |
3R | 19145481..19145924 | 737..1180 | 100 | <- | Minus |
3R | 19147135..19147870 | 1..736 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 14966718..14967365 | 1505..2152 | 100 | <- | Minus |
arm_3R | 14967603..14967740 | 1367..1504 | 100 | <- | Minus |
arm_3R | 14967810..14967995 | 1181..1366 | 100 | <- | Minus |
arm_3R | 14971203..14971646 | 737..1180 | 100 | <- | Minus |
arm_3R | 14972857..14973592 | 1..736 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 18881827..18882474 | 1505..2152 | 100 | <- | Minus |
3R | 18882712..18882849 | 1367..1504 | 100 | <- | Minus |
3R | 18882919..18883104 | 1181..1366 | 100 | <- | Minus |
3R | 18886312..18886755 | 737..1180 | 100 | <- | Minus |
3R | 18887966..18888701 | 1..736 | 100 | Minus |
Translation from 610 to 1551
> GH03502.hyp MTHWEDFYNTHLPPADFEDNRSLLKEFCERHNKLQNRIVLVTSGGTTVPL EHNTVRFVDNFSAGTRGSASAEYFLDHDYAVIFMHRHKSLEPFTRHFTGQ QFFDMLDIADNSQSSTIAIKPDSVDVFAPVLAKYKIARETQMILYVNFTS VVDYMWLLRAACECLAAFEERAVLYLAAAVSDFYIPEDMMPTHKMQSGDG APTISLQLVPKMLAPLASLWVPHAFVVSFKLETDESLLIVKARDSLNKYK HKLVIANVLQTRKHRVVFVTPTDSYELHLTREQTLQGLEIEEPIVADVVQ KHGEFISNAQQRQ*
Translation from 610 to 1551
> GH03502.pep MTHWEDFYNTHLPPADFEDNRSLLKEFCERHNKLQNRIVLVTSGGTTVPL EHNTVRFVDNFSAGTRGSASAEYFLDHDYAVIFMHRHKSLEPFTRHFTGQ QFFDMLDIADNSQSSTIAIKPDSVDVFAPVLAKYKIARETQMILYVNFTS VVDYMWLLRAACECLAAFEERAVLYLAAAVSDFYIPEDMMPTHKMQSGDG APTISLQLVPKMLAPLASLWVPHAFVVSFKLETDESLLIVKARDSLNKYK HKLVIANVLQTRKHRVVFVTPTDSYELHLTREQTLQGLEIEEPIVADVVQ KHGEFISNAQQRQ*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF18942-PA | 313 | GF18942-PA | 1..313 | 1..313 | 1685 | 99.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16174-PA | 313 | GG16174-PA | 1..313 | 1..313 | 1688 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18479-PA | 315 | GH18479-PA | 1..315 | 1..313 | 1622 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ppcs-PD | 313 | CG5629-PD | 1..313 | 1..313 | 1625 | 100 | Plus |
Ppcs-PC | 373 | CG5629-PC | 1..313 | 1..313 | 1625 | 100 | Plus |
Ppcs-PA | 313 | CG5629-PA | 1..313 | 1..313 | 1625 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI24057-PA | 313 | GI24057-PA | 1..313 | 1..313 | 1661 | 98.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL23707-PA | 313 | GL23707-PA | 1..313 | 1..313 | 1657 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA19016-PA | 313 | GA19016-PA | 1..313 | 1..313 | 1657 | 97.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10046-PA | 313 | GM10046-PA | 1..313 | 1..313 | 1655 | 98.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20133-PA | 313 | GD20133-PA | 1..313 | 1..313 | 1688 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23683-PA | 313 | GJ23683-PA | 1..313 | 1..313 | 1661 | 98.1 | Plus |
Dvir\GJ11210-PA | 62 | GJ11210-PA | 1..53 | 142..194 | 260 | 92.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14408-PA | 313 | GK14408-PA | 1..313 | 1..313 | 1654 | 97.4 | Plus |