BDGP Sequence Production Resources |
Search the DGRC for GH03514
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 35 |
Well: | 14 |
Vector: | pOT2 |
Associated Gene/Transcript | VhaPPA1-1-RA |
Protein status: | GH03514.pep: gold |
Preliminary Size: | 2200 |
Sequenced Size: | 1326 |
Gene | Date | Evidence |
---|---|---|
CG7007 | 2001-01-01 | Release 2 assignment |
CG7007 | 2001-07-04 | Blastp of sequenced clone |
CG7007 | 2003-01-01 | Sim4 clustering to Release 3 |
VhaPPA1-1 | 2008-04-29 | Release 5.5 accounting |
VhaPPA1-1 | 2008-08-15 | Release 5.9 accounting |
VhaPPA1-1 | 2008-12-18 | 5.12 accounting |
1326 bp (1326 high quality bases) assembled on 2001-07-04
GenBank Submission: AY060235
> GH03514.complete TTTTTTCGCACGGAGCAGTCACCTGTCGGCCAAGAAAATACAATTACGCC TGCAATTCGACAGTGAACAAATAGCAAGATGGCGGCCCAAATACGCACCG TGGTGTCCCAAACGTTCCTGTGGCTCTTCCTCGCCGTGGCCACCATCCTG ACCCTGTACTTCGTGATGACGGGCAAGGGCGAGCGGGTGAGCGTGGGCTG GTTCCTGGCCTCCTCAAACCCGTACATGTGGGCCTGCCTGGGCATCGGAC TCTCCGTCTCGCTGTCCGTCGTGGGCGCCGCCCTGGGCATCCATACGACG GGCACGAGCATCGTGGGCGGTGGTGTGAAGGCGCCCCGCATCAAGACCAA GAATCTGATCTCGGTCATCTTCTGCGAGGCCGTGGCCATCTACGGCCTGA TCACCGCCATCGTTCTGTCCGGCCAGCTGGAGCAGTTCTCGATGGAGACG GCCCTTTCGCAGGCGGCTATTCAGAACACGAACTGGTTCTCCGGCTACCT CATCTTCGGTGCTGGCCTGGCTGTCGGCCTGGTCAATCTGTTCTGCGGCA TTGCTGTGGGCATTGTGGGTTCGGGTGCCGCCCTCTCGGACGCCGCCAAT GCCGCCCTGTTCGTCAAGATCCTTATTGTGGAGATCTTCGGTTCGGCCAT CGGTCTGTTCGGCCTCATCGTGGGCATCTACATGACCTCCAAGTCCAAGA TGGGCGACAAGGAGTAGGCGCCGTCGCCAGCCATGCAGTCCTTCGCCACT CCATTATCATCACGAAGAACAACACACATCAGAGCATTCCCCCATCCCCA TGCAGACACGCACGACATCAGTGTTTGTGTATTTTTTTGGAAATTACGAC TCGCTATACGCAGTTACTGCTTGCAGGAGACGCCCGACAAACCGAAATCC GATCAGCCGTAACGCTTTAAACTAGGACTTAGTTACTCATTAAGATGATA GTTGGTTAAGTTGGCAGTTGGTTTTCACGCCTCGCACGCTCGCAGTCACC AGCATCACTCAATCGACTGTGGAGTGTGCACGGTGTGAAAACGACCGTGA TTTGTTTATTTCATTTCTTTGCCAAACGAAAGACATCGTGTGTGTGTGTC TGTGTTTGATTTTAAGCAGTTTGTTATGTTTGTTTCTACGCTGGCTCTTC AAAGGCTAATTTAAAATGTATTATATTTACTACCGCAAAACGATAAACTT GTATATTTCAAGCTACTGTTTGAGGCAGCAGTTGTAGATGGTTGCACAGT CGCATTATTATTATTATAGAAAGTATTCCATATTAAAACAAATAAAATAT AAAAAAAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaPPA1-1-RA | 1628 | VhaPPA1-1-RA | 254..1554 | 1..1301 | 6505 | 100 | Plus |
VhaPPA1-1.b | 1624 | VhaPPA1-1.b | 250..1550 | 1..1301 | 6505 | 100 | Plus |
VhaPPA1-1.a | 1491 | VhaPPA1-1.a | 177..1473 | 1..1301 | 6420 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 10727855..10728535 | 739..59 | 3375 | 99.7 | Minus |
chr3R | 27901430 | chr3R | 10726977..10727537 | 1300..740 | 2775 | 99.6 | Minus |
chr3R | 27901430 | chr3R | 10724304..10724454 | 693..543 | 395 | 84.1 | Minus |
chr3R | 27901430 | chr3R | 10724574..10724801 | 423..196 | 345 | 76.8 | Minus |
chr3R | 27901430 | chr3R | 10728594..10728652 | 59..1 | 295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 14903212..14903892 | 739..59 | 3405 | 100 | Minus |
3R | 32079331 | 3R | 14902329..14902890 | 1301..740 | 2810 | 100 | Minus |
3R | 32079331 | 3R | 14899657..14899807 | 693..543 | 395 | 84.1 | Minus |
3R | 32079331 | 3R | 14899927..14900154 | 423..196 | 345 | 76.8 | Minus |
3R | 32079331 | 3R | 14903951..14904009 | 59..1 | 295 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 14644043..14644723 | 739..59 | 3405 | 100 | Minus |
3R | 31820162 | 3R | 14643160..14643721 | 1301..740 | 2810 | 100 | Minus |
3R | 31820162 | 3R | 14640488..14640638 | 693..543 | 395 | 84.1 | Minus |
3R | 31820162 | 3R | 14640758..14640849 | 423..332 | 325 | 90.2 | Minus |
3R | 31820162 | 3R | 14644782..14644840 | 59..1 | 295 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 10726977..10727537 | 740..1300 | 99 | <- | Minus |
chr3R | 10727855..10728534 | 60..739 | 99 | <- | Minus |
chr3R | 10728594..10728652 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 1..639 | 79..717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 1..639 | 79..717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 1..639 | 79..717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 1..639 | 79..717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 1..639 | 79..717 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 66..1365 | 1..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 66..1365 | 1..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 66..1365 | 1..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 66..1365 | 1..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
VhaPPA1-1-RA | 53..1352 | 1..1300 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14902330..14902890 | 740..1300 | 100 | <- | Minus |
3R | 14903212..14903891 | 60..739 | 100 | <- | Minus |
3R | 14903951..14904009 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14902330..14902890 | 740..1300 | 100 | <- | Minus |
3R | 14903212..14903891 | 60..739 | 100 | <- | Minus |
3R | 14903951..14904009 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14902330..14902890 | 740..1300 | 100 | <- | Minus |
3R | 14903212..14903891 | 60..739 | 100 | <- | Minus |
3R | 14903951..14904009 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 10728052..10728612 | 740..1300 | 100 | <- | Minus |
arm_3R | 10728934..10729613 | 60..739 | 100 | <- | Minus |
arm_3R | 10729673..10729731 | 1..59 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 14643161..14643721 | 740..1300 | 100 | <- | Minus |
3R | 14644043..14644722 | 60..739 | 100 | <- | Minus |
3R | 14644782..14644840 | 1..59 | 100 | Minus |
Translation from 78 to 716
> GH03514.pep MAAQIRTVVSQTFLWLFLAVATILTLYFVMTGKGERVSVGWFLASSNPYM WACLGIGLSVSLSVVGAALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCE AVAIYGLITAIVLSGQLEQFSMETALSQAAIQNTNWFSGYLIFGAGLAVG LVNLFCGIAVGIVGSGAALSDAANAALFVKILIVEIFGSAIGLFGLIVGI YMTSKSKMGDKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17169-PA | 212 | GF17169-PA | 1..212 | 1..212 | 1040 | 97.6 | Plus |
Dana\GF17172-PA | 196 | GF17172-PA | 15..194 | 29..208 | 565 | 68.3 | Plus |
Dana\GF13808-PA | 159 | GF13808-PA | 5..159 | 43..205 | 226 | 35.5 | Plus |
Dana\GF25265-PA | 157 | GF25265-PA | 14..157 | 49..205 | 203 | 32.5 | Plus |
Dana\GF19671-PA | 180 | GF19671-PA | 26..174 | 45..202 | 203 | 33.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG20968-PA | 212 | GG20968-PA | 1..212 | 1..212 | 1050 | 98.6 | Plus |
Dere\GG20990-PA | 208 | GG20990-PA | 27..205 | 29..207 | 560 | 67 | Plus |
Dere\GG10820-PA | 159 | GG10820-PA | 5..159 | 43..205 | 221 | 34.3 | Plus |
Dere\GG15505-PA | 158 | GG15505-PA | 14..157 | 49..205 | 214 | 33.5 | Plus |
Dere\GG22236-PA | 158 | GG22236-PA | 6..158 | 43..205 | 204 | 33.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH19517-PA | 212 | GH19517-PA | 1..212 | 1..212 | 942 | 93.4 | Plus |
Dgri\GH19519-PA | 207 | GH19519-PA | 10..207 | 13..210 | 655 | 66.2 | Plus |
Dgri\GH22892-PA | 161 | GH22892-PA | 7..161 | 43..205 | 214 | 33.7 | Plus |
Dgri\GH10920-PA | 173 | GH10920-PA | 20..172 | 42..206 | 202 | 32.1 | Plus |
Dgri\GH16652-PA | 161 | GH16652-PA | 12..161 | 45..205 | 197 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaPPA1-1-PB | 212 | CG7007-PB | 1..212 | 1..212 | 1050 | 100 | Plus |
VhaPPA1-1-PA | 212 | CG7007-PA | 1..212 | 1..212 | 1050 | 100 | Plus |
VhaPPA1-2-PB | 212 | CG7026-PB | 31..209 | 29..207 | 623 | 67.6 | Plus |
Vha16-1-PB | 159 | CG3161-PB | 5..159 | 43..205 | 251 | 34.3 | Plus |
Vha16-1-PA | 159 | CG3161-PA | 5..159 | 43..205 | 251 | 34.3 | Plus |
Vha16-1-PD | 159 | CG3161-PD | 5..159 | 43..205 | 251 | 34.3 | Plus |
Vha16-1-PC | 159 | CG3161-PC | 5..159 | 43..205 | 251 | 34.3 | Plus |
Vha16-4-PA | 155 | CG9013-PA | 17..155 | 54..205 | 231 | 34.2 | Plus |
Vha16-3-PB | 158 | CG32090-PB | 15..158 | 49..205 | 231 | 31.6 | Plus |
Vha16-3-PA | 158 | CG32090-PA | 15..158 | 49..205 | 231 | 31.6 | Plus |
Vha16-5-PA | 193 | CG6737-PA | 42..187 | 48..202 | 229 | 34.4 | Plus |
Vha16-2-PA | 158 | CG32089-PA | 11..157 | 46..205 | 222 | 30.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI22994-PA | 212 | GI22994-PA | 1..212 | 1..212 | 936 | 92 | Plus |
Dmoj\GI22996-PA | 207 | GI22996-PA | 3..205 | 5..208 | 661 | 68.1 | Plus |
Dmoj\GI21278-PA | 159 | GI21278-PA | 8..159 | 46..205 | 225 | 34.4 | Plus |
Dmoj\GI13313-PA | 175 | GI13313-PA | 5..174 | 28..206 | 208 | 30.9 | Plus |
Dmoj\GI11612-PA | 158 | GI11612-PA | 17..158 | 51..205 | 193 | 32.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21698-PA | 212 | GL21698-PA | 1..212 | 1..212 | 933 | 93.4 | Plus |
Dper\GL21700-PA | 207 | GL21700-PA | 22..206 | 24..208 | 673 | 72.4 | Plus |
Dper\GL20293-PA | 159 | GL20293-PA | 7..159 | 45..205 | 218 | 34.8 | Plus |
Dper\GL26032-PA | 182 | GL26032-PA | 27..177 | 43..202 | 208 | 35.2 | Plus |
Dper\GL10498-PA | 165 | GL10498-PA | 5..165 | 33..205 | 207 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20025-PA | 212 | GA20025-PA | 1..212 | 1..212 | 933 | 93.4 | Plus |
Dpse\GA26375-PA | 207 | GA26375-PA | 22..206 | 24..208 | 673 | 72.4 | Plus |
Dpse\GA16335-PA | 159 | GA16335-PA | 7..159 | 45..205 | 218 | 34.8 | Plus |
Dpse\GA21477-PA | 165 | GA21477-PA | 5..165 | 33..205 | 208 | 32.2 | Plus |
Dpse\GA25245-PA | 182 | GA25245-PA | 27..177 | 43..202 | 207 | 35.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25814-PA | 212 | GM25814-PA | 1..212 | 1..212 | 1057 | 99.5 | Plus |
Dsec\GM25816-PA | 208 | GM25816-PA | 27..205 | 29..207 | 564 | 67.6 | Plus |
Dsec\GM20869-PA | 159 | GM20869-PA | 5..159 | 43..205 | 221 | 34.3 | Plus |
Dsec\GM11483-PA | 191 | GM11483-PA | 35..185 | 43..202 | 201 | 34 | Plus |
Dsec\GM25274-PA | 158 | GM25274-PA | 7..157 | 45..205 | 199 | 30.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD20390-PA | 212 | GD20390-PA | 1..212 | 1..212 | 1057 | 99.5 | Plus |
Dsim\GD20392-PA | 208 | GD20392-PA | 27..205 | 29..207 | 564 | 67.6 | Plus |
Dsim\GD10321-PA | 159 | GD10321-PA | 5..159 | 43..205 | 221 | 34.3 | Plus |
Dsim\GD22230-PA | 191 | GD22230-PA | 35..185 | 43..202 | 201 | 34 | Plus |
Dsim\GD14308-PA | 165 | GD14308-PA | 7..164 | 45..205 | 200 | 31.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ24692-PA | 212 | GJ24692-PA | 1..212 | 1..212 | 938 | 92.5 | Plus |
Dvir\GJ24694-PA | 207 | GJ24694-PA | 26..205 | 29..208 | 652 | 71.7 | Plus |
Dvir\GJ20880-PA | 158 | GJ20880-PA | 5..158 | 44..205 | 216 | 33.3 | Plus |
Dvir\GJ11292-PA | 159 | GJ11292-PA | 6..158 | 32..205 | 208 | 32.8 | Plus |
Dvir\GJ11291-PA | 159 | GJ11291-PA | 10..159 | 45..205 | 196 | 33.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11008-PA | 212 | GK11008-PA | 1..212 | 1..212 | 940 | 93.4 | Plus |
Dwil\GK13787-PA | 209 | GK13787-PA | 5..206 | 11..208 | 679 | 68.8 | Plus |
Dwil\GK19648-PA | 159 | GK19648-PA | 5..159 | 43..205 | 223 | 34.9 | Plus |
Dwil\GK18316-PA | 184 | GK18316-PA | 38..180 | 51..204 | 203 | 34.4 | Plus |
Dwil\GK17171-PA | 160 | GK17171-PA | 3..159 | 44..205 | 196 | 33.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26419-PA | 212 | GE26419-PA | 1..212 | 1..212 | 1061 | 100 | Plus |
Dyak\GE26421-PA | 212 | GE26421-PA | 31..209 | 29..207 | 558 | 67 | Plus |
Dyak\Vha16-PA | 159 | GE24687-PA | 5..159 | 43..205 | 221 | 34.3 | Plus |
Dyak\GE14233-PA | 158 | GE14233-PA | 6..158 | 43..205 | 202 | 33.1 | Plus |
Dyak\GE21813-PA | 158 | GE21813-PA | 14..157 | 49..205 | 200 | 31.6 | Plus |
Translation from 78 to 716
> GH03514.hyp MAAQIRTVVSQTFLWLFLAVATILTLYFVMTGKGERVSVGWFLASSNPYM WACLGIGLSVSLSVVGAALGIHTTGTSIVGGGVKAPRIKTKNLISVIFCE AVAIYGLITAIVLSGQLEQFSMETALSQAAIQNTNWFSGYLIFGAGLAVG LVNLFCGIAVGIVGSGAALSDAANAALFVKILIVEIFGSAIGLFGLIVGI YMTSKSKMGDKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
VhaPPA1-1-PB | 212 | CG7007-PB | 1..212 | 1..212 | 1050 | 100 | Plus |
VhaPPA1-1-PA | 212 | CG7007-PA | 1..212 | 1..212 | 1050 | 100 | Plus |
VhaPPA1-2-PB | 212 | CG7026-PB | 31..209 | 29..207 | 623 | 67.6 | Plus |
Vha16-1-PB | 159 | CG3161-PB | 5..159 | 43..205 | 251 | 34.3 | Plus |
Vha16-1-PA | 159 | CG3161-PA | 5..159 | 43..205 | 251 | 34.3 | Plus |