BDGP Sequence Production Resources |
Search the DGRC for GH03554
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 35 |
Well: | 54 |
Vector: | pOT2 |
Associated Gene/Transcript | CG16941-RA |
Protein status: | GH03554.pep: gold |
Preliminary Size: | 4600 |
Sequenced Size: | 2558 |
Gene | Date | Evidence |
---|---|---|
CG16941 | 2001-01-01 | Release 2 assignment |
CG16941 | 2001-07-04 | Blastp of sequenced clone |
CG16941 | 2003-01-01 | Sim4 clustering to Release 3 |
CG16941 | 2008-04-29 | Release 5.5 accounting |
CG16941 | 2008-08-15 | Release 5.9 accounting |
CG16941 | 2008-12-18 | 5.12 accounting |
2558 bp (2558 high quality bases) assembled on 2001-07-04
GenBank Submission: AY047530
> GH03554.complete ATTTTCGGCTAAACAAGCGTTTTCTCATTTCTCAAAAAGCAATCAGATTT TATCAATAAAAGAGGACGATTTCACCAGCCATGGCAACTTTAGACGCGGA AGCCAACGAGGAGCAGTTCGGCAATGATCAGCCCAAGTCGATGTCGGGTC CAATCATTGGGATTATCTATCCGCCGCCGGAAGTTAGAAATATCGTTGAC AAGACCGCCAGTTTTGTGGCTCGCAATGGACCGGAATTCGAGGCGCGCAT CCGCCAAAATGAGCTGGGCAATCCAAAGTTTAACTTCTTAAATGGCGGAG ATCCCTACCACGCATACTACAGACACAAGGTCAACGAGTTCCGCGAGGGC AATGATGCCGGTATCACTGCCCTTGCCAGCATGAAGCAGCTGGCGGTGAC CAGTGCCGCCCAACAGCGCCAGCAAGAGCTTCTCAAGCAAGTGGTGGAGC AGCAGTTCGTACCAAAGGAACCTCCACCTGAATTCGAGTTCATAGCCGAT CCGCCCTCCATTTCGGCGCTGGATTTGGACATTGTGAAGCTAACTGCTCA ATTTGTGGCCCGTAACGGCCGACAGTTTCTGACCAATCTTATGAGCCGGG AGCAGCGTAACTTTCAGTTTGACTTCCTGCGACCCCAGCACTCGCTCTTC CAGTACTTTACCAAGTTGCTGGAGCAGTATACCAAGGTCTTGATACCTCC AAAGGATTTGCTGGGCAAACTGCGTTCCGAGAGCGCACCGGGCAGGAGCA GCATGAACCAGGTGCTGGAGCAGGTTAAATATCGGGCCAACTGGCAGCGT CACCAAGAAGCACAACGCCGCCGTGAGGAGGAGAAGATCGAAAGGGAGCG CGTGGCCTATGCCCAAATCGATTGGCATGACTTTGTGGTGGTGGAGACGG TGGACTATCAGCCATTCGAATCGGGCAACTTCCCGCCACCCACGAATCCC GACGAGGTAGGAGCCCGTGTGCTAATGGAAGAGCGTCTAATGGACGAAGA GGGCGATACAGAAATGCAGATCGAGTCGGACGACGAGGGCGACTCCCAGG CTAACAACCTATTGGACAGCGGTCTGAAACTCTCGCAAATGGAGAACCGT GTGGGTATACAAATGAAGAACGTATCGTCGTATGGCCAGCCGACTGGCCC CAAGAGAGACAACACCCAGGTGCAAGACATGGACGAAGCCTCTAGTGATG AGGACACTCCAACCACTAAGTTGCAGCCATCTGTTGCGCCAATGCTGCCG CCCACCCACGACAAAGTGGTGGTCAAGAAATACGATCCTAAGGCAACGCA ACCGAAGCAGGCGCCAATGCCTACGGATGAGTATCTCATCTCGCCGATTA CAGGAGAGAAAATACCGGCTTCCAAGGTCTCGGAGCACATGCGCATCGGT CTATTGGATCCACGCTGGGTGGAACAGCGAGACAAGCATACTGTGGAGAA AATCAATCAAGACAATGTGTTCGCCGCGGGCACTGCCATCGAGGCGAGTC TCAAGCAACTGGCTGAGCGTCGTACGGATATCTTTGGTGTGGGCGACGAG GAGACCGTCATTGGTAAGAAGCTCGGCGAAGAGGAGACGAAGAAGGACGA TCGCGTCACCTGGGACGGACACACGTCCAGCGTGGAGGCGGCCACGAGAG CAGCACGTGCAAATATCACTCTGGAGGAACAAATTCATCAAATCCACAAG GTTAAGGGACTGCTGCCCGACGAGGAGAAGGAGAAAATCGGCCCCAAACC GGTGGGCAACAAGGCGACGCTTTCAGCTCCGCCGCAGCCGTCAACCAAGT CGCAGCACAGTCACTCCAGCCAGAGTCAACACCACCAAGGTGGCGGAGGT GGTCACCACGGGCATCATAATCCTCATCATCACCATCCACCGCATCAGCA GGCGCCACCTCACCAGTCGCACCACCATCACCCGCCGCAGCAGCCTCAAC CGGTGATGCAGCTGATGCAACTGCGTCCAACCATGATGCAGCCGCCTTTT GGAGCTGGTGGTGGAGGCTACATGAACATGCAGCCTGGTGGAATCCCTCA GCAAATTGCACCTGCTCCACCTGTTGATATAATGGAGGAGGAGCCGCCTT CTAAAAAGATTCGAAGCGAGGACAACCTGATTCCAGAAGCAGACTTTATT GCCACCCACAAGAGCCCTGTGACCATTCAGGTTTTGGTACCCAATTCCGA CAAATCAGAGTGGAAGCTTAATGGACAGATGATAGCCGTGACCATGGCAC TTTCTGAACCCATTGCCAATCTGAAGACGAAGCTGCAGGACGAAACTGGC ATGCCACCGGCCAAGCAGAAGATATTTTATGAGGGAATGTTCTTCAAAGA CAGCAATACCATGGCTTTTTACAATCTGGTAAACGGAACCACGGTGCATT TACAGGTCAAGGAGCGTGGTGGACGCAAAAAGTAGGCGGATCAAAGATTA AAGGCATACCAGACACAATAAGGAGTGGGCCATATATAAAAATTTATTTG TATATGGTTTCGCATAAATTTGTAATAAATCGTCAATCACAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 12824597..12826059 | 1989..527 | 7315 | 100 | Minus |
chr3R | 27901430 | chr3R | 12823872..12824080 | 2540..2332 | 1045 | 100 | Minus |
chr3R | 27901430 | chr3R | 12826637..12826825 | 189..1 | 945 | 100 | Minus |
chr3R | 27901430 | chr3R | 12824135..12824308 | 2334..2161 | 870 | 100 | Minus |
chr3R | 27901430 | chr3R | 12826120..12826293 | 527..354 | 870 | 100 | Minus |
chr3R | 27901430 | chr3R | 12824368..12824540 | 2162..1990 | 865 | 100 | Minus |
chr3R | 27901430 | chr3R | 12826350..12826514 | 354..190 | 825 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 17000111..17001573 | 1989..527 | 7315 | 100 | Minus |
3R | 32079331 | 3R | 16999385..16999594 | 2541..2332 | 1050 | 100 | Minus |
3R | 32079331 | 3R | 17002151..17002339 | 189..1 | 945 | 100 | Minus |
3R | 32079331 | 3R | 16999649..16999822 | 2334..2161 | 870 | 100 | Minus |
3R | 32079331 | 3R | 17001634..17001807 | 527..354 | 870 | 100 | Minus |
3R | 32079331 | 3R | 16999882..17000054 | 2162..1990 | 865 | 100 | Minus |
3R | 32079331 | 3R | 17001864..17002028 | 354..190 | 825 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 16740942..16742404 | 1989..527 | 7315 | 100 | Minus |
3R | 31820162 | 3R | 16740216..16740425 | 2541..2332 | 1050 | 100 | Minus |
3R | 31820162 | 3R | 16742982..16743170 | 189..1 | 945 | 100 | Minus |
3R | 31820162 | 3R | 16742465..16742638 | 527..354 | 870 | 100 | Minus |
3R | 31820162 | 3R | 16740480..16740653 | 2334..2161 | 870 | 100 | Minus |
3R | 31820162 | 3R | 16740713..16740885 | 2162..1990 | 865 | 100 | Minus |
3R | 31820162 | 3R | 16742695..16742859 | 354..190 | 825 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dbuz\BuT2 | 2775 | Dbuz\BuT2 BUT2 2775bp | 111..169 | 2483..2540 | 121 | 71.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 12824368..12824540 | 1990..2162 | 100 | <- | Minus |
chr3R | 12823872..12824078 | 2334..2540 | 100 | <- | Minus |
chr3R | 12824136..12824306 | 2163..2333 | 100 | <- | Minus |
chr3R | 12824597..12826059 | 527..1989 | 100 | <- | Minus |
chr3R | 12826121..12826292 | 355..526 | 100 | <- | Minus |
chr3R | 12826350..12826514 | 190..354 | 100 | <- | Minus |
chr3R | 12826637..12826825 | 1..189 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 1..2355 | 81..2435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 1..2355 | 81..2435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 1..2355 | 81..2435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 1..2355 | 81..2435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 1..2355 | 81..2435 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 17..2556 | 1..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 17..2556 | 1..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 17..2556 | 1..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 17..2556 | 1..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG16941-RA | 17..2556 | 1..2540 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17002151..17002339 | 1..189 | 100 | Minus | |
3R | 17001864..17002028 | 190..354 | 100 | <- | Minus |
3R | 16999386..16999592 | 2334..2540 | 100 | <- | Minus |
3R | 16999650..16999820 | 2163..2333 | 100 | <- | Minus |
3R | 16999882..17000054 | 1990..2162 | 100 | <- | Minus |
3R | 17000111..17001573 | 527..1989 | 100 | <- | Minus |
3R | 17001635..17001806 | 355..526 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17002151..17002339 | 1..189 | 100 | Minus | |
3R | 17001864..17002028 | 190..354 | 100 | <- | Minus |
3R | 16999386..16999592 | 2334..2540 | 100 | <- | Minus |
3R | 16999650..16999820 | 2163..2333 | 100 | <- | Minus |
3R | 16999882..17000054 | 1990..2162 | 100 | <- | Minus |
3R | 17000111..17001573 | 527..1989 | 100 | <- | Minus |
3R | 17001635..17001806 | 355..526 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 17002151..17002339 | 1..189 | 100 | Minus | |
3R | 17001864..17002028 | 190..354 | 100 | <- | Minus |
3R | 16999386..16999592 | 2334..2540 | 100 | <- | Minus |
3R | 16999650..16999820 | 2163..2333 | 100 | <- | Minus |
3R | 16999882..17000054 | 1990..2162 | 100 | <- | Minus |
3R | 17000111..17001573 | 527..1989 | 100 | <- | Minus |
3R | 17001635..17001806 | 355..526 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 12827357..12827528 | 355..526 | 100 | <- | Minus |
arm_3R | 12827586..12827750 | 190..354 | 100 | <- | Minus |
arm_3R | 12827873..12828061 | 1..189 | 100 | Minus | |
arm_3R | 12825108..12825314 | 2334..2540 | 100 | <- | Minus |
arm_3R | 12825372..12825542 | 2163..2333 | 100 | <- | Minus |
arm_3R | 12825604..12825776 | 1990..2162 | 100 | <- | Minus |
arm_3R | 12825833..12827295 | 527..1989 | 100 | <- | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 16742466..16742637 | 355..526 | 100 | <- | Minus |
3R | 16742695..16742859 | 190..354 | 100 | <- | Minus |
3R | 16742982..16743170 | 1..189 | 100 | Minus | |
3R | 16740217..16740423 | 2334..2540 | 100 | <- | Minus |
3R | 16740481..16740651 | 2163..2333 | 100 | <- | Minus |
3R | 16740713..16740885 | 1990..2162 | 100 | <- | Minus |
3R | 16740942..16742404 | 527..1989 | 100 | <- | Minus |
Translation from 80 to 2434
> GH03554.pep MATLDAEANEEQFGNDQPKSMSGPIIGIIYPPPEVRNIVDKTASFVARNG PEFEARIRQNELGNPKFNFLNGGDPYHAYYRHKVNEFREGNDAGITALAS MKQLAVTSAAQQRQQELLKQVVEQQFVPKEPPPEFEFIADPPSISALDLD IVKLTAQFVARNGRQFLTNLMSREQRNFQFDFLRPQHSLFQYFTKLLEQY TKVLIPPKDLLGKLRSESAPGRSSMNQVLEQVKYRANWQRHQEAQRRREE EKIERERVAYAQIDWHDFVVVETVDYQPFESGNFPPPTNPDEVGARVLME ERLMDEEGDTEMQIESDDEGDSQANNLLDSGLKLSQMENRVGIQMKNVSS YGQPTGPKRDNTQVQDMDEASSDEDTPTTKLQPSVAPMLPPTHDKVVVKK YDPKATQPKQAPMPTDEYLISPITGEKIPASKVSEHMRIGLLDPRWVEQR DKHTVEKINQDNVFAAGTAIEASLKQLAERRTDIFGVGDEETVIGKKLGE EETKKDDRVTWDGHTSSVEAATRAARANITLEEQIHQIHKVKGLLPDEEK EKIGPKPVGNKATLSAPPQPSTKSQHSHSSQSQHHQGGGGGHHGHHNPHH HHPPHQQAPPHQSHHHHPPQQPQPVMQLMQLRPTMMQPPFGAGGGGYMNM QPGGIPQQIAPAPPVDIMEEEPPSKKIRSEDNLIPEADFIATHKSPVTIQ VLVPNSDKSEWKLNGQMIAVTMALSEPIANLKTKLQDETGMPPAKQKIFY EGMFFKDSNTMAFYNLVNGTTVHLQVKERGGRKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF17916-PA | 792 | GF17916-PA | 1..792 | 1..784 | 3318 | 88.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG16800-PA | 792 | GG16800-PA | 1..792 | 1..784 | 4056 | 96 | Plus |
Dere\GG15832-PA | 953 | GG15832-PA | 11..59 | 35..84 | 156 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH18068-PA | 799 | GH18068-PA | 1..580 | 1..578 | 2637 | 90 | Plus |
Dgri\GH15948-PA | 1039 | GH15948-PA | 11..59 | 35..84 | 156 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Sf3a1-PA | 784 | CG16941-PA | 1..784 | 1..784 | 4136 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23747-PA | 788 | GI23747-PA | 1..788 | 1..784 | 3123 | 84.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22994-PA | 492 | GL22994-PA | 1..492 | 299..784 | 2029 | 82.8 | Plus |
Dper\GL22993-PA | 289 | GL22993-PA | 1..284 | 1..286 | 1285 | 94.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14228-PA | 788 | GA14228-PA | 1..788 | 1..784 | 3339 | 87.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM15394-PA | 784 | GM15394-PA | 1..784 | 1..784 | 4158 | 99.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD15098-PA | 363 | GD15098-PA | 4..363 | 2..366 | 1568 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ10593-PA | 780 | GJ10593-PA | 1..780 | 1..784 | 3149 | 83.2 | Plus |
Dvir\GJ12853-PA | 992 | GJ12853-PA | 11..59 | 35..84 | 157 | 58 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK12756-PA | 793 | GK12756-PA | 5..565 | 4..566 | 2521 | 92.3 | Plus |
Dwil\GK20430-PA | 1022 | GK20430-PA | 11..81 | 35..133 | 158 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE26116-PA | 784 | GE26116-PA | 1..784 | 1..784 | 4115 | 97.7 | Plus |
Translation from 80 to 2434
> GH03554.hyp MATLDAEANEEQFGNDQPKSMSGPIIGIIYPPPEVRNIVDKTASFVARNG PEFEARIRQNELGNPKFNFLNGGDPYHAYYRHKVNEFREGNDAGITALAS MKQLAVTSAAQQRQQELLKQVVEQQFVPKEPPPEFEFIADPPSISALDLD IVKLTAQFVARNGRQFLTNLMSREQRNFQFDFLRPQHSLFQYFTKLLEQY TKVLIPPKDLLGKLRSESAPGRSSMNQVLEQVKYRANWQRHQEAQRRREE EKIERERVAYAQIDWHDFVVVETVDYQPFESGNFPPPTNPDEVGARVLME ERLMDEEGDTEMQIESDDEGDSQANNLLDSGLKLSQMENRVGIQMKNVSS YGQPTGPKRDNTQVQDMDEASSDEDTPTTKLQPSVAPMLPPTHDKVVVKK YDPKATQPKQAPMPTDEYLISPITGEKIPASKVSEHMRIGLLDPRWVEQR DKHTVEKINQDNVFAAGTAIEASLKQLAERRTDIFGVGDEETVIGKKLGE EETKKDDRVTWDGHTSSVEAATRAARANITLEEQIHQIHKVKGLLPDEEK EKIGPKPVGNKATLSAPPQPSTKSQHSHSSQSQHHQGGGGGHHGHHNPHH HHPPHQQAPPHQSHHHHPPQQPQPVMQLMQLRPTMMQPPFGAGGGGYMNM QPGGIPQQIAPAPPVDIMEEEPPSKKIRSEDNLIPEADFIATHKSPVTIQ VLVPNSDKSEWKLNGQMIAVTMALSEPIANLKTKLQDETGMPPAKQKIFY EGMFFKDSNTMAFYNLVNGTTVHLQVKERGGRKK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG16941-PA | 784 | CG16941-PA | 1..784 | 1..784 | 4136 | 100 | Plus |