BDGP Sequence Production Resources |
Search the DGRC for GH03683
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 36 |
Well: | 83 |
Vector: | pOT2 |
Associated Gene/Transcript | Vha26-RA |
Protein status: | GH03683.pep: gold |
Preliminary Size: | 2679 |
Sequenced Size: | 2232 |
Gene | Date | Evidence |
---|---|---|
CG1088 | 2000-02-14 | Blastp of sequenced clone |
CG1088 | 2001-01-01 | Release 2 assignment |
CG1088 | 2003-01-01 | Sim4 clustering to Release 3 |
Vha26 | 2008-04-29 | Release 5.5 accounting |
Vha26 | 2008-08-15 | Release 5.9 accounting |
Vha26 | 2008-12-18 | 5.12 accounting |
2232 bp (2232 high quality bases) assembled on 2000-02-14
GenBank Submission: AF145618
> GH03683.complete GGCACGAGCAAAAGTAACTTATCGTTTTCCACTTTCCTCGTGTTGGGCCG CCGTTTCCAACTCAGTTCGGCTGTGAATGTATTAGCTTAATTAAATTTCA ATTATTTCCAGGCACGGTTGTTGTACGTGGGCTTCTTTAAAACACTTGAA TTTCCTTTCGGTTTGTGCAGTGAAAAAAATCAGTCAAAATGGCACTGAGC GATGCTGATGTACAAAAGCAGATCAAGCACATGATGGCGTTCATTGAGCA GGAGGCCAATGAGAAAGCCGAGGAGATCGATGCCAAGGCCGAGGAGGAGT TCAACATTGAGAAGGGACGCCTGGTCCAGCAGCAGCGTCTCAAGATCATG GAATACTACGAGAAGAAGGAGAAGCAAGTTGAGCTGCAGAAGAAGATTCA GTCCTCCAACATGCTCAACCAGGCTCGTCTGAAGGTGCTGAAAGTGCGCG AGGACCATGTGAGCAGCGTGCTGGATGATGCCCGCAAGCGTCTCGGCGAG GTCACCAAGAATCAGTCCGAGTACGAGACTGTGCTGACCAAGCTCATCGT CCAGGGCCTGTTCCAGATCATGGAGCCCAAGGTGATCCTGCGCTGCCGCG AGGTGGACGTCCCCCTGGTACGTAACGTCCTGCCTGCCGCTGTGGAGCAA TACAAGGCCCAGATCAATCAGAACGTCGAGCTGTTCATCGACGAGAAAGA CTTCCTCTCTGCTGATACCTGCGGTGGTGTTGAGCTGCTGGCCCTCAACG GACGCATCAAGGTGCCCAATACGCTGGAGTCCAGATTAGACCTCATTTCG CAGCAGCTGGTGCCCGAGATTCGTAACGCACTTTTCGGCCGCAACGTCAA TCGCAAATTCACCGACTAAATTCTATAAGTGCAAAACAAAACATAACTAA CCAGAAAGAGAACCAGCATCAACACCTATTCAGCAGGAACAGTTCAAGTT ATTACAACAGAAGCTCCACCCACTAAATATTGAACCCAAGTAAACTTATC CTTTGGCAGTCAGGAGGCAACAGCTAGGATTATATTTGATTGCAAAATAC TTTTGCCGTTGTCTTTGTAAAGTGAAATTGAAACACTCAAGAACATTTCG GTCCTTGTGTACGCAACAGTTTTAATAGTAACCACACTAAACGCGCATAT ATATTCTCCGATATATATGTCTGTATGCCAATACTTATTATATAGTTTAG AGGACACGATCCTAGGAGCATACGAAAGCATAATACGAGTTTGTTAAAGT TTGTTCGTTTTTTTTTTACATATGCACATATTTCTGAGCAGTAGGTCTAG ATATGTGCTTATATTGTATACATACACTTTAAAATTTTGCATACATTCCT GTCCAAGAATTTTTATTTCAGTTTTCCCCTCGTTTATTGTACATTATTTT CTGTAGTCTTTGTTAACTTTTTATATGTCTATGTCGTTTATGTTCGTAAT TATCAAGTGCAGCGTTCAGGAGGAACAACGGCAGTGGATCGCCCCTTTTA CAGAGCCGCTGGCAGGTTGCGCATGCGACCACACAGCATTGTTGCTCAGC GAAGCACCGAAATGGACCTAAACCCCCGATTTCGCTTCTTCGAGGGCAAC GGACGCTTGTGCAACTGCCACTGGCTCAACGAAAGCCCCGAAAATCATCA ATGTCTGTTGTTGTTGAGATACCGAGAGTAGAGAATACACACTGCTTAGC ACGCGACACTTAATACCCATTCATTACACATGCACCAACGACGATGAAGT TTTGCCAAGTAGCTAAGTTTGTTGACCTGACCATCAAGTGCAGCTTTCAC ACCCTCATATAACTACTTAAAGAAAATATAGAAAAATGGAAATTAGTTTT GCAATTTAGGGGACTGCCGAACTGCCACCGTTTCCACCTGACGCTGCGCC ATCATATCAGGCTCTAAAAATCAACACACCATGTTCAAACACACGACTAG CATACAGGAGCAGGAGCTACAGTAAATTTGAACCTTGTATTCGCATGTTC GCCAATGTTCATAGTGTATTCTTCAAGCTCATTTTCTAACCAAGTTACCA AGTTCAATATGATGAATAACTACAAGATTAGCAAACAAATACAAGTAGCA TATGCGTTATTATATAACATCGAGTACTATATACATTACATGAAATACAA AATGCAAGAAAAATTACTTTTAAACAAAATTTATGTTGAATAAAAAACAG TATTTCCAAAAACTAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3R | 27901430 | chr3R | 1418904..1420358 | 760..2214 | 7275 | 100 | Plus |
chr3R | 27901430 | chr3R | 1418512..1418847 | 429..764 | 1665 | 99.7 | Plus |
chr3R | 27901430 | chr3R | 1418224..1418443 | 219..438 | 1100 | 100 | Plus |
chr3R | 27901430 | chr3R | 1417484..1417697 | 8..221 | 1070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 32079331 | 3R | 5593245..5594702 | 760..2217 | 7290 | 100 | Plus |
3R | 32079331 | 3R | 5592853..5593188 | 429..764 | 1665 | 99.7 | Plus |
3R | 32079331 | 3R | 5592565..5592784 | 219..438 | 1100 | 100 | Plus |
3R | 32079331 | 3R | 5591825..5592038 | 8..221 | 1070 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3R | 31820162 | 3R | 5334076..5335533 | 760..2217 | 7290 | 100 | Plus |
3R | 31820162 | 3R | 5333684..5334019 | 429..764 | 1665 | 99.7 | Plus |
3R | 31820162 | 3R | 5333396..5333615 | 219..438 | 1100 | 100 | Plus |
3R | 31820162 | 3R | 5332656..5332869 | 8..221 | 1070 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3R | 1417476..1417697 | 1..221 | 98 | -> | Plus |
chr3R | 1418227..1418439 | 222..434 | 100 | -> | Plus |
chr3R | 1418518..1418844 | 435..761 | 100 | -> | Plus |
chr3R | 1418906..1420358 | 762..2214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RB | 1..681 | 189..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RB | 1..681 | 189..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RA | 1..681 | 189..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RB | 1..681 | 189..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RA | 1..681 | 189..869 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RA | 54..2268 | 1..2214 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RA | 54..2268 | 1..2214 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RA | 55..2269 | 1..2214 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RA | 54..2268 | 1..2214 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Vha26-RA | 55..2269 | 1..2214 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5591817..5592038 | 1..221 | 98 | -> | Plus |
3R | 5592568..5592780 | 222..434 | 100 | -> | Plus |
3R | 5592859..5593185 | 435..761 | 100 | -> | Plus |
3R | 5593247..5594699 | 762..2214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5591817..5592038 | 1..221 | 98 | -> | Plus |
3R | 5592568..5592780 | 222..434 | 100 | -> | Plus |
3R | 5592859..5593185 | 435..761 | 100 | -> | Plus |
3R | 5593247..5594699 | 762..2214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5591817..5592038 | 1..221 | 98 | -> | Plus |
3R | 5592568..5592780 | 222..434 | 100 | -> | Plus |
3R | 5592859..5593185 | 435..761 | 100 | -> | Plus |
3R | 5593247..5594699 | 762..2214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3R | 1417539..1417760 | 1..221 | 98 | -> | Plus |
arm_3R | 1418290..1418502 | 222..434 | 100 | -> | Plus |
arm_3R | 1418581..1418907 | 435..761 | 100 | -> | Plus |
arm_3R | 1418969..1420421 | 762..2214 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3R | 5332648..5332869 | 1..221 | 98 | -> | Plus |
3R | 5333399..5333611 | 222..434 | 100 | -> | Plus |
3R | 5333690..5334016 | 435..761 | 100 | -> | Plus |
3R | 5334078..5335530 | 762..2214 | 100 | Plus |
Translation from 188 to 868
> GH03683.hyp MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQR LKIMEYYEKKEKQVELQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARK RLGEVTKNQSEYETVLTKLIVQGLFQIMEPKVILRCREVDVPLVRNVLPA AVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNGRIKVPNTLESRL DLISQQLVPEIRNALFGRNVNRKFTD*
Translation from 188 to 868
> GH03683.pep MALSDADVQKQIKHMMAFIEQEANEKAEEIDAKAEEEFNIEKGRLVQQQR LKIMEYYEKKEKQVELQKKIQSSNMLNQARLKVLKVREDHVSSVLDDARK RLGEVTKNQSEYETVLTKLIVQGLFQIMEPKVILRCREVDVPLVRNVLPA AVEQYKAQINQNVELFIDEKDFLSADTCGGVELLALNGRIKVPNTLESRL DLISQQLVPEIRNALFGRNVNRKFTD*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF20699-PA | 226 | GF20699-PA | 1..226 | 1..226 | 1122 | 95.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG12936-PA | 226 | GG12936-PA | 1..226 | 1..226 | 1122 | 95.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH14669-PA | 226 | GH14669-PA | 1..226 | 1..226 | 1070 | 90.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Vha26-PC | 226 | CG1088-PC | 1..226 | 1..226 | 1117 | 100 | Plus |
Vha26-PA | 226 | CG1088-PA | 1..226 | 1..226 | 1117 | 100 | Plus |
Vha26-PB | 226 | CG1088-PB | 1..226 | 1..226 | 1117 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI23674-PA | 226 | GI23674-PA | 1..226 | 1..226 | 1085 | 91.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL21540-PA | 226 | GL21540-PA | 1..226 | 1..226 | 1079 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10614-PA | 226 | GA10614-PA | 1..226 | 1..226 | 1079 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM10818-PA | 226 | GM10818-PA | 1..226 | 1..226 | 1162 | 99.6 | Plus |
Dsec\GM11995-PA | 103 | GM11995-PA | 1..83 | 1..83 | 411 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD19797-PA | 226 | GD19797-PA | 1..226 | 1..226 | 1162 | 99.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ23234-PA | 226 | GJ23234-PA | 1..226 | 1..226 | 1075 | 89.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK22511-PA | 226 | GK22511-PA | 1..226 | 1..226 | 1095 | 93.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE10141-PA | 226 | GE10141-PA | 1..226 | 1..226 | 1139 | 97.3 | Plus |