Clone GH03691 Report

Search the DGRC for GH03691

Clone and Library Details

Library:GH
Tissue Source:Drosophila melanogaster head
Created by:Ling Hong
Date Registered:1998-06-02
Comments:Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library.
Original Plate Number:36
Well:91
Vector:pOT2
Associated Gene/TranscriptCyt-b5-r-RA
Protein status:GH03691.pep: gold
Preliminary Size:1582
Sequenced Size:1481

Associated Genes

Associations are from manual ordering of a clone or by a periodic analysis.
Gene Date Evidence
CG13279 2001-01-01 Release 2 assignment
CG13279 2001-09-19 Blastp of sequenced clone
CG13279 2003-01-01 Sim4 clustering to Release 3
Cyt-b5-r 2008-04-29 Release 5.5 accounting
Cyt-b5-r 2008-08-15 Release 5.9 accounting
Cyt-b5-r 2008-12-18 5.12 accounting

Clone Sequence Records

GH03691.complete Sequence

1481 bp (1481 high quality bases) assembled on 2001-09-19

GenBank Submission: AY058287

> GH03691.complete
TTGGAATCCCAGCGGAAAGGTGCTCGGATCGGTAAAGTTTGTGCCACAGA
CGTCAAGGATCAAAAGGACTCGGCAATATGGTAATCGAGGAGTGGAAAAA
GAGTGGCATTGCCACCAAGTTTCCAACATACCGAAATTCGGCCCTAATCA
CCACACACAGCTGGCAAAAGGGTAAACGGCAGGACGATGGAGCCGAAGGA
CTGTGGCGCATCAACGATGGCATCTATGACTTCACCTCGTTCATTGACAA
GCATCCTGGCGGTCCCTTCTGGATTCGTGAGACCAAGGGCACCGACATCA
CCGAAGCCTTTGAGGCACATCATCTGACCACGGCTCCCGAAAAGATGATC
GCCAAATACAAGGTGAGGGATGCGGCTGAACCCAGAATCTACACACTGAC
CTTGGAGGAGGGCGGATTCTACAAGACGCTAAAGGAGCGAGTCCGCGAGC
AACTAAAGACCATAGACAAGCGGCCGAAAAAGAAGAGTGATCTCATTCAC
CTGGGTCTCGTTGTGTCGCTCTACCTGTTGGGCATTGCCAGTGCCAAATA
CAACAGCCTTTTGGCTTTGGTCTTGGCGAGTGTGGCCCTCTGCTGGACGG
TGATCGTGTCCCACAACTACTTTCATCGTCGGGACAACTGGCAGATGTAC
GCCTTTAATCTGGGCATGATGAACTTTGCCGCCTGGCGTGTGTCCCATGC
TCTGTCCCACCACATCTATCCGAATTCGTATTTCGATCTGGAACTCTCGA
TGTTCGAACCCTTGCTGTGCTGGGTGCCCAATCCGCACATCAAGAGCAAG
TTGATGCGTTATGTGTCCTGGGTCACGGAGCCGGTGGCCTATGCCCTCGC
CTTCTTCATACAAATGGGCACTCGTATTTTCTATTCGCTGCGCCACACCA
ACATCCTCTACTGGCACGACCTACTGCCACTGACTATACCCATTGCCATA
TACCTGGGAACCGGGGGATCTTTAGGCATTTGGATCTGCGTGCGCCAGTG
GCTCGCGATGACGTCGATAGCCAGCTTTAGCTTCTGCTTGATTGGTCTGA
ATGCGGCGCATCACGATCCGGAAATCTATCACGAGGGTGATGCCAATCGT
GAGGATCGTGACTGGGGTCTCTTCCAGGTGGACACGATTATCGACCGCGG
TGATCTCAAGTGGTCGCAGTTCCTGGTGCTCACCCACTTTGGTGACCATG
TGCTCCACCATCTCTTCCCGACCCTGGATCATGGCCTCCTGCCCGCCCTC
TATCCGGTGCTTTACCAGACTCTCGATGAGTTCAAGGGTCATCTCCGCGA
GTGCAACCACATCGAGCACATGATTGGCCAGCACAAGCAACTATTGCGCA
TCGAGCCCAATCCCAGGGCTCCTGGGGCGGGAAAGTAGGACTTAATTTGT
ATGGGGCTTAAGTAAAAGTAAATAAATATATCCACAACATCTTATTAGTT
TACAAAAAAAAAAAAAAAAAAAAAAAAAAAA

GH03691.complete Blast Records

Blast to MB8.fasta performed 2010-07-15 20:24:29
Subject Length Description Subject Range Query Range Score Percent Strand
Cyt-b5-r-RA 1727 Cyt-b5-r-RA 183..1639 1..1457 7285 100 Plus
CG17928.b 2039 CG17928.b 1635..1756 1113..1234 265 81.1 Plus
CG17928.a 2155 CG17928.a 1708..1829 1113..1234 265 81.1 Plus
CG17928.b 2039 CG17928.b 1138..1204 610..676 155 82 Plus
CG17928.a 2155 CG17928.a 1211..1277 610..676 155 82 Plus
Blast to d_melanogaster_OreR.fa performed 2019-03-16 23:43:30
Subject Length Description Subject Range Query Range Score Percent Strand
chr2L 23010047 chr2L 16787571..16788150 1453..874 2870 99.7 Minus
chr2L 23010047 chr2L 16788924..16789414 491..1 2395 99.2 Minus
chr2L 23010047 chr2L 16788222..16788604 874..492 1885 99.5 Minus
chr2L 23010047 chr2L 16791748..16791869 1113..1234 265 81.1 Plus
Blast to dmel-all-all_noncoding-r5.12.fasta performed on 2010-04-22 16:30:05 has no hits.
Blast to na_all.dmel.RELEASE6 performed 2019-03-16 23:43:28
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16788862..16789445 1457..874 2920 100 Minus
2L 23513712 2L 16790219..16790709 491..1 2455 100 Minus
2L 23513712 2L 16789517..16789899 874..492 1915 100 Minus
2L 23513712 2L 16793042..16793163 1113..1234 265 81.1 Plus
Blast to na_arms.dmel.RELEASE6 performed 2011-12-12 21:47:09
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 16788862..16789445 1457..874 2920 100 Minus
2L 23513712 2L 16790219..16790709 491..1 2455 100 Minus
2L 23513712 2L 16789517..16789899 874..492 1915 100 Minus
2L 23513712 2L 16793042..16793163 1113..1234 265 81.1 Plus
2L 23513712 2L 16792488..16792554 610..676 155 82 Plus
Blast to na_te.dros performed on 2019-03-16 23:43:29 has no hits.

GH03691.complete Sim4 Records

Sim4 to d_melanogaster_OreR.fa performed 2019-03-16 23:44:24 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
chr2L 16787571..16788149 875..1453 99 <- Minus
chr2L 16788222..16788604 492..874 99 <- Minus
chr2L 16788924..16789414 1..491 99   Minus
Sim4 to dmel-all-CDS-r5.12.fasta performed 2008-12-08 16:11:19 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 1..1311 78..1388 100   Plus
Sim4 to dmel-all-CDS-r5.32.fasta performed 2011-03-16 20:09:56 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 1..1311 78..1388 100   Plus
Sim4 to dmel-all-CDS-r5.52.fasta performed 2013-08-04 17:48:21 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 1..1311 78..1388 100   Plus
Sim4 to dmel-all-CDS-r5.9.fasta performed 2008-07-21 20:40:48 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 1..1311 78..1388 100   Plus
Sim4 to dmel-all-CDS-r6.02.fasta performed 2014-11-27 16:56:57 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 1..1311 78..1388 100   Plus
Sim4 to dmel-all-transcript-r5.12.fasta performed 2008-11-11 00:00:57 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 10..1462 1..1453 100   Plus
Sim4 to dmel-all-transcript-r5.32.fasta performed 2011-03-16 20:09:56 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 10..1462 1..1453 100   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 17:48:21 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 13..1465 1..1453 100   Plus
Sim4 to dmel-all-transcript-r5.9.fasta performed 2008-07-21 20:40:48 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 10..1462 1..1453 100   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 16:56:57 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
Cyt-b5-r-RA 13..1465 1..1453 100   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:44:24 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16788866..16789444 875..1453 100 <- Minus
2L 16789517..16789899 492..874 100 <- Minus
2L 16790219..16790709 1..491 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:44:24 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16788866..16789444 875..1453 100 <- Minus
2L 16789517..16789899 492..874 100 <- Minus
2L 16790219..16790709 1..491 100   Minus
Sim4 to na_all.dmel.RELEASE6 performed 2019-03-16 23:44:24 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16788866..16789444 875..1453 100 <- Minus
2L 16789517..16789899 492..874 100 <- Minus
2L 16790219..16790709 1..491 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 17:48:21 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 16789517..16789899 492..874 100 <- Minus
arm_2L 16788866..16789444 875..1453 100 <- Minus
arm_2L 16790219..16790709 1..491 100   Minus
Sim4 to na_arms.dmel.RELEASE6 performed 2011-12-09 17:18:22 Download gff for GH03691.complete
Subject Subject Range Query Range Percent Splice Strand
2L 16788866..16789444 875..1453 100 <- Minus
2L 16789517..16789899 492..874 100 <- Minus
2L 16790219..16790709 1..491 100   Minus

GH03691.pep Sequence

Translation from 77 to 1387

> GH03691.pep
MVIEEWKKSGIATKFPTYRNSALITTHSWQKGKRQDDGAEGLWRINDGIY
DFTSFIDKHPGGPFWIRETKGTDITEAFEAHHLTTAPEKMIAKYKVRDAA
EPRIYTLTLEEGGFYKTLKERVREQLKTIDKRPKKKSDLIHLGLVVSLYL
LGIASAKYNSLLALVLASVALCWTVIVSHNYFHRRDNWQMYAFNLGMMNF
AAWRVSHALSHHIYPNSYFDLELSMFEPLLCWVPNPHIKSKLMRYVSWVT
EPVAYALAFFIQMGTRIFYSLRHTNILYWHDLLPLTIPIAIYLGTGGSLG
IWICVRQWLAMTSIASFSFCLIGLNAAHHDPEIYHEGDANREDRDWGLFQ
VDTIIDRGDLKWSQFLVLTHFGDHVLHHLFPTLDHGLLPALYPVLYQTLD
EFKGHLRECNHIEHMIGQHKQLLRIEPNPRAPGAGK*

GH03691.pep Blast Records

Blast to dana-all-translation-r1.3.fasta performed 2019-03-16 12:33:05
Subject Length Description Subject Range Query Range Score Percent Strand
Dana\GF14544-PA 436 GF14544-PA 1..436 1..436 2190 90.8 Plus
Dana\GF15361-PA 440 GF15361-PA 8..438 4..436 1324 55 Plus
Blast to dere-all-translation-r1.3.fasta performed 2019-03-16 12:33:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dere\GG20107-PA 436 GG20107-PA 1..436 1..436 2298 97 Plus
Dere\GG22772-PA 441 GG22772-PA 11..439 6..436 1275 54.3 Plus
Blast to dgri-all-translation-r1.3.fasta performed 2019-03-16 12:33:06
Subject Length Description Subject Range Query Range Score Percent Strand
Dgri\GH10203-PA 436 GH10203-PA 1..436 1..436 2058 83.7 Plus
Dgri\GH11565-PA 440 GH11565-PA 7..438 3..436 1328 54.6 Plus
Blast to dmel-all-translation-r6.23.fasta performed 2019-03-25 10:31:15
Subject Length Description Subject Range Query Range Score Percent Strand
Cyt-b5-r-PB 436 CG13279-PB 1..436 1..436 2368 100 Plus
Cyt-b5-r-PA 436 CG13279-PA 1..436 1..436 2368 100 Plus
CG17928-PB 441 CG17928-PB 10..439 5..436 1303 55.6 Plus
CG17928-PA 441 CG17928-PA 10..439 5..436 1303 55.6 Plus
Blast to dmoj-all-translation-r1.3.fasta performed 2019-03-16 12:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dmoj\GI14919-PA 436 GI14919-PA 1..436 1..436 2083 85.8 Plus
Dmoj\GI17056-PA 443 GI17056-PA 10..441 3..436 1320 54.4 Plus
Blast to dper-all-translation-r1.3.fasta performed 2019-03-16 12:33:07
Subject Length Description Subject Range Query Range Score Percent Strand
Dper\GL19332-PA 376 GL19332-PA 1..373 64..436 1803 87.9 Plus
Dper\GL18786-PA 440 GL18786-PA 8..438 4..436 1319 54 Plus
Blast to dpse-all-translation-r3.2.fasta performed 2019-03-16 12:33:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dpse\GA12166-PA 439 GA12166-PA 1..436 1..436 2126 88.5 Plus
Dpse\GA25795-PA 440 GA25795-PA 8..438 4..436 1324 54 Plus
Blast to dsec-all-translation-r1.3.fasta performed 2019-03-16 12:33:08
Subject Length Description Subject Range Query Range Score Percent Strand
Dsec\GM17157-PA 436 GM17157-PA 1..436 1..436 2314 98.4 Plus
Dsec\GM17205-PA 441 GM17205-PA 10..439 5..436 1295 55.1 Plus
Blast to dsim-all-translation-r1.4.fasta performed 2019-03-16 12:33:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dsim\GD21896-PA 436 GD21896-PA 1..436 1..436 2315 98.4 Plus
Dsim\GD24082-PA 441 GD24082-PA 10..439 5..436 1308 55.6 Plus
Blast to dvir-all-translation-r1.2.fasta performed 2019-03-16 12:33:09
Subject Length Description Subject Range Query Range Score Percent Strand
Dvir\Cyt-b5-r-PA 436 GJ24061-PA 1..436 1..436 2125 87.6 Plus
Dvir\GJ17306-PA 440 GJ17306-PA 7..438 3..436 1313 54.4 Plus
Blast to dwil-all-translation-r1.3.fasta performed 2019-03-16 12:33:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dwil\GK18156-PA 434 GK18156-PA 1..433 1..433 2070 85 Plus
Dwil\GK18233-PA 443 GK18233-PA 11..439 4..434 1263 52.2 Plus
Blast to dyak-all-translation-r1.3.fasta performed 2019-03-16 12:33:10
Subject Length Description Subject Range Query Range Score Percent Strand
Dyak\GE13163-PA 436 GE13163-PA 1..436 1..436 2313 98.2 Plus
Dyak\GE12766-PA 441 GE12766-PA 11..439 6..436 1276 54.8 Plus

GH03691.hyp Sequence

Translation from 77 to 1387

> GH03691.hyp
MVIEEWKKSGIATKFPTYRNSALITTHSWQKGKRQDDGAEGLWRINDGIY
DFTSFIDKHPGGPFWIRETKGTDITEAFEAHHLTTAPEKMIAKYKVRDAA
EPRIYTLTLEEGGFYKTLKERVREQLKTIDKRPKKKSDLIHLGLVVSLYL
LGIASAKYNSLLALVLASVALCWTVIVSHNYFHRRDNWQMYAFNLGMMNF
AAWRVSHALSHHIYPNSYFDLELSMFEPLLCWVPNPHIKSKLMRYVSWVT
EPVAYALAFFIQMGTRIFYSLRHTNILYWHDLLPLTIPIAIYLGTGGSLG
IWICVRQWLAMTSIASFSFCLIGLNAAHHDPEIYHEGDANREDRDWGLFQ
VDTIIDRGDLKWSQFLVLTHFGDHVLHHLFPTLDHGLLPALYPVLYQTLD
EFKGHLRECNHIEHMIGQHKQLLRIEPNPRAPGAGK*

GH03691.hyp Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-27 18:37:59
Subject Length Description Subject Range Query Range Score Percent Strand
Cyt-b5-r-PB 436 CG13279-PB 1..436 1..436 2368 100 Plus
Cyt-b5-r-PA 436 CG13279-PA 1..436 1..436 2368 100 Plus
CG17928-PB 441 CG17928-PB 10..439 5..436 1303 55.6 Plus
CG17928-PA 441 CG17928-PA 10..439 5..436 1303 55.6 Plus