BDGP Sequence Production Resources |
Search the DGRC for GH03795
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 37 |
Well: | 95 |
Vector: | pOT2 |
Associated Gene/Transcript | CG18178-RA |
Protein status: | GH03795.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1328 |
Gene | Date | Evidence |
---|---|---|
CG18178 | 2001-01-01 | Release 2 assignment |
CG18178 | 2002-07-13 | Blastp of sequenced clone |
CG18178 | 2003-01-01 | Sim4 clustering to Release 3 |
CG18178 | 2008-04-29 | Release 5.5 accounting |
CG18178 | 2008-08-15 | Release 5.9 accounting |
CG18178 | 2008-12-18 | 5.12 accounting |
1328 bp (1328 high quality bases) assembled on 2002-07-13
GenBank Submission: BT001385
> GH03795.complete CTAATATATACACTTTCGGTTAGATTTTGTTTTTTGTTAAGATCTGGTCA CACCGCCGTTTACACGTGCAAGTTGAATTCGAAAAGAAAACATTTTAATT TTCCGGTAAAACATGAAGAAAAAGCAGGTGGAAAGTGCATCCGAGGAGGA GGAAGTGCAGTCCGAAAACTCCGAGGCTTCCGACGAGGAGGAGCTACAGG CAGAGGACTCCGACGAGGACCAGCTGCAGGCGGACGACTCCGAAGACGAA GATTCCGATGGATCCGAACTGGATCTGGACGCCAGTGACACCGAATCCGA TGAAGATGATGGTGAGGAGGAAGATACAATCAAACCGCAGCCCAAAAGCC GTGCCGAGATTATCGACGAGAAGATCCACACCAAGTACGAGCAGTTAAAG GGCACCCGGCTGTATGTCCGGTTTCCCCAAAAACTGCCCCTGGACTTGGA TGAATTCAATGCCAAGGTGAAGGCTCTGCATCCACTGGTTCTGAAGTCCA CAAAGCCTCGCCAGAAGCATGCACGTTTCTGCCTCGTCGATTTCAAGTCG AAGGAAGATCGCGATCAAGCCTTTAAGGATATCAAGGCTTCGATCGAAAA GGATGACAAGCACAAGGGCTTATTCGTATCACTGCCTAAGACGGATTCCG ATGATTTTGTCAACGAGCTGGTGACCCGCAAGCAGACATCCATCGTAAAC AAACGTACCAAGGCCCTGATGAAGCGTGCTACTAAGAAGGTCCTCACCAA GGGTAACTTCACCTCGTCCGTGGTCATTACCAATCTGCCAAAGACCAGTT CGTTGCCCCAGGTGCGCCAGCTGTTCCACGACCAGGCAGTGGACATTCAA ATACGACCGGGCAAGGGTAAATTCCGGGACTACAGCACGGCGACCGTAAC CCTGCCAACGACCCACGATGCACGCAAGGCCATCAAGGAGAAGCTCAGCC TGGCTGGCACGCCACTTATATTGCGCTTCAACACTCAGAACAAGCGGAGC TCTAAAAATAAGCTCAAGCGAAAGGCCGAGAAAGGGAAATCCCCAGAGAA GAATCCACTGAGTACGAAACAAAACGATAAGAAGTCCAAGTCGGAAAAAG GAGAAGCACCTAAAATTAAGAAACCAGAAGTAAATACTAAGCACCAGCCG AAGGAAAACCTTAAGAGAAAGTCGCCCAAGGAGAAAACACCTAATATTAA GACACCCAAGAAGTTAAAGAAACTAACCGCAGAATAGAGTGTAGTTAATG TTTGATAATTTAAATAAAATTCCCCCCTTTTGATTGACCATTAATTAGGT GTAAAAAACCAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18178-RA | 1310 | CG18178-RA | 1..1310 | 1..1310 | 6550 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 9709637..9710922 | 1310..25 | 6415 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 9717784..9719071 | 1312..25 | 6425 | 99.9 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 4696..4779 | 1054..1139 | 119 | 63.2 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 9709637..9710917 | 30..1310 | 100 | <- | Minus |
chr3L | 9710967..9710985 | 11..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1125 | 113..1237 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1125 | 113..1237 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1125 | 113..1237 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1125 | 113..1237 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1125 | 113..1237 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1281 | 30..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1310 | 1..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1310 | 1..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1307 | 4..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG18178-RA | 1..1310 | 1..1310 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9717786..9719066 | 30..1310 | 100 | <- | Minus |
3L | 9719116..9719144 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9717786..9719066 | 30..1310 | 100 | <- | Minus |
3L | 9719116..9719144 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9717786..9719066 | 30..1310 | 100 | <- | Minus |
3L | 9719116..9719144 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 9710886..9712166 | 30..1310 | 100 | <- | Minus |
arm_3L | 9712216..9712244 | 1..29 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 9710886..9712166 | 30..1310 | 100 | <- | Minus |
3L | 9712216..9712244 | 1..29 | 100 | Minus |
Translation from 112 to 1236
> GH03795.hyp MKKKQVESASEEEEVQSENSEASDEEELQAEDSDEDQLQADDSEDEDSDG SELDLDASDTESDEDDGEEEDTIKPQPKSRAEIIDEKIHTKYEQLKGTRL YVRFPQKLPLDLDEFNAKVKALHPLVLKSTKPRQKHARFCLVDFKSKEDR DQAFKDIKASIEKDDKHKGLFVSLPKTDSDDFVNELVTRKQTSIVNKRTK ALMKRATKKVLTKGNFTSSVVITNLPKTSSLPQVRQLFHDQAVDIQIRPG KGKFRDYSTATVTLPTTHDARKAIKEKLSLAGTPLILRFNTQNKRSSKNK LKRKAEKGKSPEKNPLSTKQNDKKSKSEKGEAPKIKKPEVNTKHQPKENL KRKSPKEKTPNIKTPKKLKKLTAE*
Translation from 112 to 1236
> GH03795.pep MKKKQVESASEEEEVQSENSEASDEEELQAEDSDEDQLQADDSEDEDSDG SELDLDASDTESDEDDGEEEDTIKPQPKSRAEIIDEKIHTKYEQLKGTRL YVRFPQKLPLDLDEFNAKVKALHPLVLKSTKPRQKHARFCLVDFKSKEDR DQAFKDIKASIEKDDKHKGLFVSLPKTDSDDFVNELVTRKQTSIVNKRTK ALMKRATKKVLTKGNFTSSVVITNLPKTSSLPQVRQLFHDQAVDIQIRPG KGKFRDYSTATVTLPTTHDARKAIKEKLSLAGTPLILRFNTQNKRSSKNK LKRKAEKGKSPEKNPLSTKQNDKKSKSEKGEAPKIKKPEVNTKHQPKENL KRKSPKEKTPNIKTPKKLKKLTAE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25131-PA | 370 | GF25131-PA | 1..370 | 1..374 | 1071 | 64.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14013-PA | 376 | GG14013-PA | 28..376 | 15..374 | 1443 | 84.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH15944-PA | 312 | GH15944-PA | 22..291 | 45..305 | 852 | 65.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG18178-PB | 374 | CG18178-PB | 1..374 | 1..374 | 1895 | 100 | Plus |
CG18178-PA | 374 | CG18178-PA | 1..374 | 1..374 | 1895 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16595-PA | 299 | GI16595-PA | 17..284 | 40..312 | 894 | 65 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL17875-PA | 305 | GL17875-PA | 1..293 | 1..311 | 847 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA14827-PA | 305 | GA14827-PA | 1..293 | 1..311 | 847 | 63.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM24847-PA | 374 | GM24847-PA | 28..362 | 28..362 | 1505 | 91.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD12899-PA | 374 | GD12899-PA | 1..362 | 1..362 | 1583 | 92.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ12847-PA | 306 | GJ12847-PA | 10..291 | 33..311 | 861 | 64.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK13495-PA | 371 | GK13495-PA | 117..334 | 74..289 | 740 | 65.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21215-PA | 385 | GE21215-PA | 1..385 | 1..374 | 1428 | 83.2 | Plus |