BDGP Sequence Production Resources |
Search the DGRC for GH03839
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 38 |
Well: | 39 |
Vector: | pOT2 |
Associated Gene/Transcript | Kaz1-ORFB-RA |
Protein status: | GH03839.pep: gold |
Preliminary Size: | 686 |
Sequenced Size: | 561 |
Gene | Date | Evidence |
---|---|---|
CG33045 | 2001-11-29 | Blastp of sequenced clone |
CG1220 | 2002-01-01 | Sim4 clustering to Release 2 |
CG33045 | 2003-01-01 | Sim4 clustering to Release 3 |
Kaz1-ORFB | 2008-04-29 | Release 5.5 accounting |
Kaz1-ORFB | 2008-08-15 | Release 5.9 accounting |
Kaz1-ORFB | 2008-12-18 | 5.12 accounting |
561 bp (561 high quality bases) assembled on 2001-11-29
GenBank Submission: AY069042
> GH03839.complete CTCAAGCGAAGCGGAACCAACAAACTCCCGAAATGGATTGGATCAAAATA TTTGTTTCAGGTCTTGCCCTGCTATTGATTGGGATGGCGCAGTGCTACCC GCAGTTCGATAGCGAAAACCCCTGGTTGAGGCCTCGGCAACCCACTGAAC CTACGATATCTCCGAATGCGGGGGGCAGTACCCCGGCCAACGCTGCTCCA CCAACCACCCAGTCACCGCGCTATTTCGCCTGTTTCCATTCATGCCCGGC CACCAGCGAGTACAATCCAATCTGCGGCAGTGATAACGTGAACTACTACA ATGAAAACAAGTTCAACTGCGCCTTGAACTGCGGCCTAAACATCCGGAAG GTGCACAAGGGAATTTGTCAGACTTAGTCTAGATCGCTTGAATTCAGTTC ACTTGTGTATGTAAGCATGAACGTATTGCAAATACTCTATTCATCGTCTG ATCGATGACATCAGCGAATATAAATATGTATATATGTACGTACATAAATA AAAACTTAGCGCTGTTACTGGTATATGGACGGTGTATGACCCCAAAAAAA AAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Kaz1-ORFB-RC | 910 | Kaz1-ORFB-RC | 408..903 | 54..549 | 2480 | 100 | Plus |
Kaz1-ORFA-RA | 1938 | Kaz1-ORFA-RA | 1357..1642 | 54..339 | 1430 | 100 | Plus |
Kaz1-ORFB-RG | 1938 | Kaz1-ORFB-RG | 1357..1642 | 54..339 | 1430 | 100 | Plus |
Kaz1-ORFA-RA | 1938 | Kaz1-ORFA-RA | 1722..1931 | 340..549 | 1050 | 100 | Plus |
Kaz1-ORFB-RG | 1938 | Kaz1-ORFB-RG | 1722..1931 | 340..549 | 1050 | 100 | Plus |
Kaz1-ORFB-RC | 910 | Kaz1-ORFB-RC | 307..360 | 1..54 | 270 | 100 | Plus |
Kaz1-ORFA-RA | 1938 | Kaz1-ORFA-RA | 1256..1309 | 1..54 | 270 | 100 | Plus |
Kaz1-ORFB-RG | 1938 | Kaz1-ORFB-RG | 1256..1309 | 1..54 | 270 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 217445..217730 | 54..339 | 1430 | 100 | Plus |
chr3L | 24539361 | chr3L | 217810..218013 | 340..543 | 1020 | 100 | Plus |
chr3L | 24539361 | chr3L | 217344..217397 | 1..54 | 270 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
mdg1 | 7480 | mdg1 DMRTMGD1 7480bp Derived from X59545 (g8507) (Rel. 49, Last updated, Version 4). | 2685..2769 | 471..388 | 107 | 63.2 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 217344..217397 | 1..54 | 100 | -> | Plus |
chr3L | 217446..217730 | 55..339 | 100 | -> | Plus |
chr3L | 217810..218013 | 340..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RF | 1..345 | 33..377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RF | 1..345 | 33..377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RA | 1..345 | 33..377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RF | 1..345 | 33..377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RA | 1..345 | 33..377 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RC | 307..360 | 1..54 | 100 | -> | Plus |
Kaz1-ORFB-RC | 409..897 | 55..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RF | 588..1130 | 1..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RA | 20..562 | 1..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RE | 581..1123 | 1..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Kaz1-ORFB-RA | 20..562 | 1..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 217491..217775 | 55..339 | 100 | -> | Plus |
3L | 217855..218058 | 340..543 | 100 | Plus | |
3L | 217389..217442 | 1..54 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 217491..217775 | 55..339 | 100 | -> | Plus |
3L | 217855..218058 | 340..543 | 100 | Plus | |
3L | 217389..217442 | 1..54 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 217491..217775 | 55..339 | 100 | -> | Plus |
3L | 217855..218058 | 340..543 | 100 | Plus | |
3L | 217389..217442 | 1..54 | 100 | -> | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 217389..217442 | 1..54 | 100 | -> | Plus |
arm_3L | 217491..217775 | 55..339 | 100 | -> | Plus |
arm_3L | 217855..218058 | 340..543 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 217491..217775 | 55..339 | 100 | -> | Plus |
3L | 217855..218058 | 340..543 | 100 | Plus | |
3L | 217389..217442 | 1..54 | 100 | -> | Plus |
Translation from 2 to 376
> GH03839.hyp QAKRNQQTPEMDWIKIFVSGLALLLIGMAQCYPQFDSENPWLRPRQPTEP TISPNAGGSTPANAAPPTTQSPRYFACFHSCPATSEYNPICGSDNVNYYN ENKFNCALNCGLNIRKVHKGICQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Kaz1-ORFB-PF | 114 | CG1220-PF | 1..114 | 11..124 | 642 | 100 | Plus |
Kaz1-ORFB-PE | 114 | CG1220-PE | 1..114 | 11..124 | 642 | 100 | Plus |
Kaz1-ORFB-PA | 114 | CG1220-PA | 1..114 | 11..124 | 642 | 100 | Plus |
Kaz1-ORFB-PH | 115 | CG1220-PH | 1..103 | 11..113 | 577 | 99 | Plus |
CG34454-PA | 133 | CG34454-PA | 3..125 | 11..123 | 194 | 38.9 | Plus |
Translation from 32 to 376
> GH03839.pep MDWIKIFVSGLALLLIGMAQCYPQFDSENPWLRPRQPTEPTISPNAGGST PANAAPPTTQSPRYFACFHSCPATSEYNPICGSDNVNYYNENKFNCALNC GLNIRKVHKGICQT*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24746-PA | 119 | GF24746-PA | 10..119 | 11..112 | 231 | 52.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG14702-PA | 112 | GG14702-PA | 1..112 | 1..112 | 374 | 75 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13148-PA | 166 | GH13148-PA | 29..67 | 63..101 | 174 | 76.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Kaz1-ORFB-PF | 114 | CG1220-PF | 1..114 | 1..114 | 642 | 100 | Plus |
Kaz1-ORFB-PE | 114 | CG1220-PE | 1..114 | 1..114 | 642 | 100 | Plus |
Kaz1-ORFB-PA | 114 | CG1220-PA | 1..114 | 1..114 | 642 | 100 | Plus |
Kaz1-ORFB-PH | 115 | CG1220-PH | 1..103 | 1..103 | 577 | 99 | Plus |
CG34454-PA | 133 | CG34454-PA | 3..125 | 1..113 | 194 | 38.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI17786-PA | 108 | GI17786-PA | 1..107 | 1..114 | 257 | 47.9 | Plus |
Dmoj\GI17274-PA | 133 | GI17274-PA | 36..125 | 34..113 | 165 | 44.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL16115-PA | 109 | GL16115-PA | 1..107 | 1..113 | 250 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17247-PA | 109 | GA17247-PA | 1..107 | 1..113 | 250 | 52.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM14318-PA | 114 | GM14318-PA | 1..114 | 1..114 | 572 | 93.9 | Plus |
Dsec\GM14292-PA | 424 | GM14292-PA | 156..270 | 1..104 | 169 | 42.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD13556-PA | 114 | GD13556-PA | 1..114 | 1..114 | 578 | 94.7 | Plus |
Dsim\GD13530-PA | 426 | GD13530-PA | 156..270 | 1..104 | 159 | 40.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17612-PA | 59 | GJ17612-PA | 1..58 | 57..114 | 234 | 70.7 | Plus |
Dvir\GJ22810-PA | 247 | GJ22810-PA | 58..114 | 44..101 | 139 | 54.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK11275-PA | 280 | GK11275-PA | 191..276 | 24..101 | 143 | 44.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21065-PA | 112 | GE21065-PA | 1..112 | 1..112 | 464 | 78.6 | Plus |
Dyak\GE18022-PA | 121 | GE18022-PA | 9..74 | 7..102 | 157 | 38.5 | Plus |
Dyak\GE21037-PA | 433 | GE21037-PA | 219..274 | 47..104 | 149 | 53.4 | Plus |