BDGP Sequence Production Resources |
Search the DGRC for GH03980
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 39 |
Well: | 80 |
Vector: | pOT2 |
Associated Gene/Transcript | Hf-RA |
Protein status: | GH03980.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 905 |
Gene | Date | Evidence |
---|---|---|
CG10658 | 2001-01-01 | Release 2 assignment |
CG10658 | 2002-05-30 | Blastp of sequenced clone |
CG10658 | 2003-01-01 | Sim4 clustering to Release 3 |
Hf | 2008-04-29 | Release 5.5 accounting |
Hf | 2008-08-15 | Release 5.9 accounting |
Hf | 2008-12-18 | 5.12 accounting |
905 bp (905 high quality bases) assembled on 2002-05-30
GenBank Submission: AY118294
> GH03980.complete CAGCGATCAGAGGAGCATGGCGAGATCAGGGCGCAGTTCGAGGTTTCTTA TCGGCGGCAGCACTTGCTGTTCGATGCTTCTGGGTCTTATCTGTCTGGCT CTGGCGGACTCATCCCAAGTGAAAGAACGCAGCCCTACCATCTTGGTGAG AAATACAATTCAAGCGGTGGAGAGGCTCTTCAATCAGGTGCTCTACACGA CCATCGAAGATGCCCGCCAACGACTACCGGGTCTTCCGGCCAACGAAACC ATCGATCGGCAGTACTTCGAGGAGCTCGACCTGGTTGCTGGGAACGAGGA CTATTACAGCACTGCATTCTATATCTTCGCCTGGATAAACAGCGACCTCA TGTACCATAAGACTCCCGATAAGTTGCTCGTCGAGGTTCTTCCCGGCGAG AAGATCGCCATCCGCAGATTCTTCGCCAAGGTCAAGCCGCATCTTACCAA GTATCTGCGACTCAGTCGACAGGACAGGTCGGAATTGGTTTCCAACGTCA CCCAGTTGGCCACCGAAACCAAGGACAGTCTGATCACAACCTTCTTGGAG TTTCCCCAGAACCTGAAGAGCCAACTTCCTGAGCTCCAGCTAATGGACTA CACCAAATTGGCTCAGGCTTTGGTGCAGGGGGTGGCCAGTGGTATATGGA CGAAGGCTTAAGATTAATAGCTAAATATTTAAACAATATCATAGAATTAG AAAGTGTTTGTAATAAAATGAGAAATGTACTTCAAAGAACAATATTCGGA ATCTATTTATACGAGGACTTTATTCCTGAAAAATGCCGTTTAACTTCCGG AAAATTTCCGACTGTCTGATCAACATGTGTAGATATCGAGAACTGATACT TTAAAGCAATAAAGATATTATCGTGACTTGGAAAAAAAAAAAAAAAAAAA AAAAA
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 19965077..19965860 | 98..881 | 99 | <- | Minus |
chr2L | 19965924..19966020 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 1..645 | 17..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 1..645 | 17..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 1..645 | 17..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 1..645 | 17..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 1..645 | 17..661 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 1..878 | 4..881 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 14..894 | 1..881 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 16..896 | 1..881 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 1..878 | 4..881 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Hf-RA | 16..896 | 1..881 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19966727..19967510 | 98..881 | 100 | <- | Minus |
2L | 19967574..19967670 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19966727..19967510 | 98..881 | 100 | <- | Minus |
2L | 19967574..19967670 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19966727..19967510 | 98..881 | 100 | <- | Minus |
2L | 19967574..19967670 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 19966727..19967510 | 98..881 | 100 | <- | Minus |
arm_2L | 19967574..19967670 | 1..97 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 19966727..19967510 | 98..881 | 100 | <- | Minus |
2L | 19967574..19967670 | 1..97 | 100 | Minus |
Translation from 1 to 660
> GH03980.hyp SDQRSMARSGRSSRFLIGGSTCCSMLLGLICLALADSSQVKERSPTILVR NTIQAVERLFNQVLYTTIEDARQRLPGLPANETIDRQYFEELDLVAGNED YYSTAFYIFAWINSDLMYHKTPDKLLVEVLPGEKIAIRRFFAKVKPHLTK YLRLSRQDRSELVSNVTQLATETKDSLITTFLEFPQNLKSQLPELQLMDY TKLAQALVQGVASGIWTKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hf-PA | 214 | CG10658-PA | 1..214 | 6..219 | 1081 | 100 | Plus |
Translation from 16 to 660
> GH03980.pep MARSGRSSRFLIGGSTCCSMLLGLICLALADSSQVKERSPTILVRNTIQA VERLFNQVLYTTIEDARQRLPGLPANETIDRQYFEELDLVAGNEDYYSTA FYIFAWINSDLMYHKTPDKLLVEVLPGEKIAIRRFFAKVKPHLTKYLRLS RQDRSELVSNVTQLATETKDSLITTFLEFPQNLKSQLPELQLMDYTKLAQ ALVQGVASGIWTKA*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF15467-PA | 209 | GF15467-PA | 22..208 | 25..212 | 601 | 60.1 | Plus |
Dana\GF15466-PA | 202 | GF15466-PA | 34..199 | 45..212 | 408 | 45.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG21600-PA | 216 | GG21600-PA | 1..213 | 1..214 | 979 | 86 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH13035-PA | 192 | GH13035-PA | 14..189 | 23..210 | 454 | 47.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Hf-PA | 214 | CG10658-PA | 1..214 | 1..214 | 1081 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI18184-PA | 208 | GI18184-PA | 1..188 | 12..210 | 294 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL26684-PA | 207 | GL26684-PA | 1..204 | 1..211 | 668 | 61.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA10473-PA | 207 | GA10473-PA | 1..204 | 1..211 | 666 | 61.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16974-PA | 214 | GM16974-PA | 1..213 | 1..213 | 1092 | 96.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\Hf-PA | 214 | GD21724-PA | 1..214 | 1..214 | 1094 | 96.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ14654-PA | 204 | GJ14654-PA | 1..198 | 12..210 | 461 | 46.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15207-PA | 207 | GK15207-PA | 14..205 | 22..211 | 609 | 60.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\Hf-PA | 216 | GE12617-PA | 1..213 | 1..214 | 1017 | 89.7 | Plus |