BDGP Sequence Production Resources |
Search the DGRC for GH04007
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 40 |
Well: | 7 |
Vector: | pOT2 |
Associated Gene/Transcript | CG8818-RA |
Protein status: | GH04007.pep: gold |
Preliminary Size: | 1705 |
Sequenced Size: | 1559 |
Gene | Date | Evidence |
---|---|---|
CG8818 | 2001-01-01 | Release 2 assignment |
CG8818 | 2001-10-10 | Blastp of sequenced clone |
CG8818 | 2003-01-01 | Sim4 clustering to Release 3 |
CG8818 | 2008-04-29 | Release 5.5 accounting |
CG8818 | 2008-08-15 | Release 5.9 accounting |
CG8818 | 2008-12-18 | 5.12 accounting |
1559 bp (1559 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060613
> GH04007.complete CGGTAACACTGTTGAAAACAAAAAATATACACAACTTATACAATCCGAGA CAAAAACGGGGCAAAGGAGGCGTGTCTAGAAGAGCGGAGGACGCGGAGGT GACCCCAAGTCATGGCCATGCTGACGCGATTGACCAGCAGCGGCACCACC ACGGTGGCCGGAGCACCCGGTTCACCCAAGGGCCTGCAGCGTTTCCAAAA CTACATCTCGGCCTTCTTGTGGCCGGGAACGCAGCGGCAACGTCGGAAGT CCACACATCTCGATCCCATGGACTGTTTCACCAACGACTTGGTGACCAGA AAGACCCAAAAGTGGGAGGAGCTGCGCGATAGCCTGATAAAGAGGCCATC GTCCGGAAATCTGGAGGCGGACGCCAATTGCAATGTGGGAACGCAGCGAA AGGCTGGTAGTACCAGCTTTAGCCAGAACGTGGGTCTTATGTCCAAGGGC ATGATGAGTGATCTGAAGGCGCTGCGCTCCCCCCAACTGGGACTGGATAT CAGATCCCTGTCGCAGGCGCAGCTGGACAACCTGCTGATGGCCACGTTGG AGATCAAGAACAAGCTGGACTTTCTCTACCTGATACGTCAGTGCATCCGC TGCAACCTGTTGCCCTCCAACGAGGTCTTCGTGTCCTGTCTAAAGTATTT GAGCGCGCAGCGCAAGCTCCAGCAGTTGGAGGCACTGGCGGAGACCTGTC GGCAGCTGGAGCACCCGTTCTCACAGACCTACGCGGATCTGGCGCCCTTC CGCGCCATCGCCCTGTGGAACAATGGTAACGCCGACGTGGCCCTGATGAC GCTACATCGCGGTTACGGGGTAAGCATGACTTCGGAGGAGGGCAGGCGGA TGGCGCGCTCCGCATTCCGCACCATTTCCGAGGAGACTCTGGCCCAGAAG AGTGAGGCGGTGCTAGTGTCGCTGCTGGAGGTAGCGCGTGCCATTCACCG CGAGCACAAGGACATCTTTGTGGTGGCCTGTGTGTGGAAGCAATGCTTCG CTAGCGATTGGTTTTGCGATCAAAAATCGGCTTCGGAACTGTTTGAGCAC TACAAGGAGCTGCAAGAGCTAGTGGAGAGGAGAGCCAGTTCTTTGTGCTC TTCATTTCTGGCCCGTAACAATGTTGATGCGGTGCATCGGCTAATCGAGG CGTTCTTGCAGCACCAGCAGCGTTTGGCCTGCTCCAGCTGCCTCAGCTTG CTCTTTAACTATCAATATATGCGCAAGGATCTGCGAGCCTGCGCTGAGAT TGTCAAATCCTGCAGTGAATTAGAGATGCCGCTAAATGAGCTGCAGAACG AACAGTTCCTCAGTCTGTTCCTCGACCAGAGCGATCCTGTGGACTCTTCG GGAATGGCCAGCAAGTACAAGGCACCCAAGTCCTTCCAGTACAAGTTCTA GTCCCCAGTTTCCATCGTTAAGCCGTTGTCATCGTAGTTACAGCACAAGT GTTTGCACCATTGAGCAATATTGCAAGCATCCCCATATTGCAAGCCCCCA CAAGGAATGTAGTGTCTCTTCAATAAATGTTATTTAATATCAAAAAAAAA AAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2R | 21145070 | chr2R | 8405160..8406247 | 1082..1 | 5285 | 99.3 | Minus |
chr2R | 21145070 | chr2R | 8404587..8404911 | 1541..1217 | 1625 | 100 | Minus |
chr2R | 21145070 | chr2R | 8404964..8405099 | 1216..1081 | 665 | 99.3 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25286936 | 2R | 12517837..12518918 | 1082..1 | 5410 | 100 | Minus |
2R | 25286936 | 2R | 12517264..12517588 | 1541..1217 | 1625 | 100 | Minus |
2R | 25286936 | 2R | 12517641..12517776 | 1216..1081 | 680 | 100 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2R | 25260384 | 2R | 12519036..12520117 | 1082..1 | 5410 | 100 | Minus |
2R | 25260384 | 2R | 12518463..12518787 | 1541..1217 | 1625 | 100 | Minus |
2R | 25260384 | 2R | 12518840..12518975 | 1216..1081 | 680 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2R | 8404587..8404911 | 1217..1541 | 100 | <- | Minus |
chr2R | 8404964..8405097 | 1083..1216 | 99 | <- | Minus |
chr2R | 8405160..8406247 | 1..1082 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1290 | 112..1401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1290 | 112..1401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1290 | 112..1401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1290 | 112..1401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1290 | 112..1401 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1541 | 1..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1541 | 1..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1535 | 7..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1541 | 1..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG8818-RA | 1..1535 | 7..1541 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12517264..12517588 | 1217..1541 | 100 | <- | Minus |
2R | 12517641..12517774 | 1083..1216 | 100 | <- | Minus |
2R | 12517837..12518918 | 1..1082 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12517264..12517588 | 1217..1541 | 100 | <- | Minus |
2R | 12517641..12517774 | 1083..1216 | 100 | <- | Minus |
2R | 12517837..12518918 | 1..1082 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12517264..12517588 | 1217..1541 | 100 | <- | Minus |
2R | 12517641..12517774 | 1083..1216 | 100 | <- | Minus |
2R | 12517837..12518918 | 1..1082 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2R | 8404769..8405093 | 1217..1541 | 100 | <- | Minus |
arm_2R | 8405146..8405279 | 1083..1216 | 100 | <- | Minus |
arm_2R | 8405342..8406423 | 1..1082 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2R | 12518463..12518787 | 1217..1541 | 100 | <- | Minus |
2R | 12518840..12518973 | 1083..1216 | 100 | <- | Minus |
2R | 12519036..12520117 | 1..1082 | 100 | Minus |
Translation from 111 to 1400
> GH04007.hyp MAMLTRLTSSGTTTVAGAPGSPKGLQRFQNYISAFLWPGTQRQRRKSTHL DPMDCFTNDLVTRKTQKWEELRDSLIKRPSSGNLEADANCNVGTQRKAGS TSFSQNVGLMSKGMMSDLKALRSPQLGLDIRSLSQAQLDNLLMATLEIKN KLDFLYLIRQCIRCNLLPSNEVFVSCLKYLSAQRKLQQLEALAETCRQLE HPFSQTYADLAPFRAIALWNNGNADVALMTLHRGYGVSMTSEEGRRMARS AFRTISEETLAQKSEAVLVSLLEVARAIHREHKDIFVVACVWKQCFASDW FCDQKSASELFEHYKELQELVERRASSLCSSFLARNNVDAVHRLIEAFLQ HQQRLACSSCLSLLFNYQYMRKDLRACAEIVKSCSELEMPLNELQNEQFL SLFLDQSDPVDSSGMASKYKAPKSFQYKF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8818-PA | 429 | CG8818-PA | 1..429 | 1..429 | 2204 | 100 | Plus |
Translation from 111 to 1400
> GH04007.pep MAMLTRLTSSGTTTVAGAPGSPKGLQRFQNYISAFLWPGTQRQRRKSTHL DPMDCFTNDLVTRKTQKWEELRDSLIKRPSSGNLEADANCNVGTQRKAGS TSFSQNVGLMSKGMMSDLKALRSPQLGLDIRSLSQAQLDNLLMATLEIKN KLDFLYLIRQCIRCNLLPSNEVFVSCLKYLSAQRKLQQLEALAETCRQLE HPFSQTYADLAPFRAIALWNNGNADVALMTLHRGYGVSMTSEEGRRMARS AFRTISEETLAQKSEAVLVSLLEVARAIHREHKDIFVVACVWKQCFASDW FCDQKSASELFEHYKELQELVERRASSLCSSFLARNNVDAVHRLIEAFLQ HQQRLACSSCLSLLFNYQYMRKDLRACAEIVKSCSELEMPLNELQNEQFL SLFLDQSDPVDSSGMASKYKAPKSFQYKF*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF12446-PA | 432 | GF12446-PA | 1..432 | 1..429 | 2046 | 89.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG22572-PA | 431 | GG22572-PA | 1..431 | 1..429 | 2227 | 96.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH20568-PA | 426 | GH20568-PA | 1..426 | 1..429 | 1739 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG8818-PA | 429 | CG8818-PA | 1..429 | 1..429 | 2204 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI19762-PA | 419 | GI19762-PA | 1..419 | 1..429 | 1763 | 78.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL10212-PA | 440 | GL10212-PA | 1..440 | 1..429 | 2013 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA21344-PA | 440 | GA21344-PA | 1..440 | 1..429 | 2017 | 85.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM20353-PA | 431 | GM20353-PA | 1..431 | 1..429 | 2243 | 97.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD25832-PA | 183 | GD25832-PA | 1..183 | 247..429 | 957 | 98.9 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ18206-PA | 417 | GJ18206-PA | 1..417 | 1..429 | 1734 | 76.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK19480-PA | 428 | GK19480-PA | 1..428 | 1..429 | 1847 | 79.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE13441-PA | 431 | GE13441-PA | 1..431 | 1..429 | 2234 | 97 | Plus |