BDGP Sequence Production Resources |
Search the DGRC for GH04025
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 40 |
Well: | 25 |
Vector: | pOT2 |
Associated Gene/Transcript | Ptpa-RA |
Protein status: | GH04025.pep: gold |
Preliminary Size: | 1300 |
Sequenced Size: | 1408 |
Gene | Date | Evidence |
---|---|---|
CG3289 | 2001-01-01 | Release 2 assignment |
CG3289 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3289 | 2003-02-17 | Blastp of sequenced clone |
Ptpa | 2008-04-29 | Release 5.5 accounting |
Ptpa | 2008-08-15 | Release 5.9 accounting |
Ptpa | 2008-12-18 | 5.12 accounting |
1408 bp (1408 high quality bases) assembled on 2003-02-17
GenBank Submission: AY060614
> GH04025.complete AAAAAGAGGAAGATGCCCCCAAAATAACAAACAAAACGTAACTCCCGATC AAAATAGCTTTAAATTGAAGTTAAATAACGAAACAACTATAATGGCGAGT GGCATTAACCAAGCAGCAGGTAAACTGCCGGCAATTGCGAAGAAGGTGCA AAATCTCGGCGATATGGGCGTTTGGCAAAAATCCCGCGCCTTCCACGATT TAATTGGATATATAAATGGCACCAGTTCGGCCATTCAGGGCATTAAAACC ACAGACGAGATTTTCGAGTCGGAAATGCTCAAGAAGCTGCTGCGGCTATT CGATGCACTGGAGAAATTGGTAGAGCAAAATCCTCCATTGGAGCAGCCGC AGCGGTTCGGAAACAAAGCCTACAGGGATTGGGCGCAGGCAATGCGGGAA TTGTTGCCCGAACTCCTAGAACAGCTGTTGCCAGACGACAAGAAGCGATA CCAGGTGGAGCTGGGGCAGTATCTCACTGAATCTTTCGGCAATGCCACCA GGATCGACTACGGCACCGGCCACGAGCTGTCCTTCCTCTTCTTCCTGTGC TCCCTGTTCAAGGCGGAGATCCTGCAGGAAAGGGACATCGTGAGTGCTGC GCTGAGACTCTTCAATCGGTACCTTGAGCTCGCCAGGCAGCTGCAGCGAA CATACAACATGGAACCCGCTGGGAGCCAAGGAGTCTGGTCGCTGGACGAT TTCCAGTTCGTGCCCTTCATCTGGGGCAGTGCACAGCTGGCGGTTAAGAG TCCCTTTGATCCCTCGAAGTTCGTGGACGAGGCGATAATCACCGAGTACA AGGATCACTTCATGTTCATCAGTTGCATCGACTACATCTGCAAGGTCAAG ACTGGACACTTTGGCGAGCACTCTAACCAGCTGTGGAGCATCACGGATGT GCCAACATGGGCCAAGATCAACGCGGGACTAGTTAAGATGTACCAAAAGG AGATTCTCTCCAAGTTTCCCGTGATCCAGCACGTCTACTTCGGAGAACTG ATGACATTCGAGCCCGTCTCCTCTGGCACAACTCTGTCCAACGCACGACT GGGTCATGTGGCTCCGCCGCCATCCAAACGCATCTGCATCGGGACTCCAA ACTTGGTGCCACCAGTTCCTGTTGCCACTGCTCCTCCTCCGCCCGCCGAA TCTCTTAGCATCGAACAGAATGTGGGCGACTCGAGCAGTGAGAGCAGCGA CAACAGCGTGGTACTACGTCCATCCACATCGTCGTCTTCTCTGGTGGCGG CCGCCGAGGGATCTGGGGATAAGCCCAGCAAGGAATAGACTACAGAATGG AGGAAAATGGCGATGGTGTAACCTGTGTTAAAAATTCTTATTAATAGCGT TGGCCAATGGTCCAGTAAAAACTGTTTACACAAGTACAAAAAAAAAAAAA AAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ptpa-RA | 1496 | Ptpa-RA | 90..1478 | 1..1389 | 6945 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 3376798..3377429 | 116..747 | 3070 | 99.1 | Plus |
chr2L | 23010047 | chr2L | 3377774..3378210 | 951..1387 | 2170 | 99.8 | Plus |
chr2L | 23010047 | chr2L | 3377481..3377690 | 743..952 | 1050 | 100 | Plus |
chr2L | 23010047 | chr2L | 3376628..3376748 | 1..121 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 3377178..3377809 | 116..747 | 3145 | 99.8 | Plus |
2L | 23513712 | 2L | 3378154..3378592 | 951..1389 | 2195 | 100 | Plus |
2L | 23513712 | 2L | 3377861..3378070 | 743..952 | 1050 | 100 | Plus |
2L | 23513712 | 2L | 3377008..3377128 | 1..121 | 605 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
2L | 23513712 | 2L | 3377178..3377809 | 116..747 | 3145 | 99.8 | Plus |
2L | 23513712 | 2L | 3378154..3378592 | 951..1389 | 2195 | 100 | Plus |
2L | 23513712 | 2L | 3377861..3378070 | 743..952 | 1050 | 100 | Plus |
2L | 23513712 | 2L | 3377008..3377128 | 1..121 | 605 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 3376628..3376746 | 1..119 | 100 | -> | Plus |
chr2L | 3376802..3377425 | 120..743 | 99 | -> | Plus |
chr2L | 3377482..3377690 | 744..952 | 100 | -> | Plus |
chr2L | 3377776..3378210 | 953..1387 | 99 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 1..1197 | 92..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 1..1197 | 92..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 1..1197 | 92..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 1..1197 | 92..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 1..1197 | 92..1288 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 1..1383 | 1..1383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 1..1383 | 1..1383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 7..1393 | 1..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 1..1383 | 1..1383 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
Ptpa-RA | 7..1393 | 1..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3377008..3377126 | 1..119 | 100 | -> | Plus |
2L | 3377182..3377805 | 120..743 | 100 | -> | Plus |
2L | 3377862..3378070 | 744..952 | 100 | -> | Plus |
2L | 3378156..3378590 | 953..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3377008..3377126 | 1..119 | 100 | -> | Plus |
2L | 3377182..3377805 | 120..743 | 100 | -> | Plus |
2L | 3377862..3378070 | 744..952 | 100 | -> | Plus |
2L | 3378156..3378590 | 953..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3377008..3377126 | 1..119 | 100 | -> | Plus |
2L | 3377182..3377805 | 120..743 | 100 | -> | Plus |
2L | 3377862..3378070 | 744..952 | 100 | -> | Plus |
2L | 3378156..3378590 | 953..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 3377008..3377126 | 1..119 | 100 | -> | Plus |
arm_2L | 3377182..3377805 | 120..743 | 100 | -> | Plus |
arm_2L | 3377862..3378070 | 744..952 | 100 | -> | Plus |
arm_2L | 3378156..3378590 | 953..1387 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 3377182..3377805 | 120..743 | 100 | -> | Plus |
2L | 3377862..3378070 | 744..952 | 100 | -> | Plus |
2L | 3378156..3378590 | 953..1387 | 100 | Plus | |
2L | 3377008..3377126 | 1..119 | 100 | -> | Plus |
Translation from 1 to 1287
> GH04025.hyp KRGRCPQNNKQNVTPDQNSFKLKLNNETTIMASGINQAAGKLPAIAKKVQ NLGDMGVWQKSRAFHDLIGYINGTSSAIQGIKTTDEIFESEMLKKLLRLF DALEKLVEQNPPLEQPQRFGNKAYRDWAQAMRELLPELLEQLLPDDKKRY QVELGQYLTESFGNATRIDYGTGHELSFLFFLCSLFKAEILQERDIVSAA LRLFNRYLELARQLQRTYNMEPAGSQGVWSLDDFQFVPFIWGSAQLAVKS PFDPSKFVDEAIITEYKDHFMFISCIDYICKVKTGHFGEHSNQLWSITDV PTWAKINAGLVKMYQKEILSKFPVIQHVYFGELMTFEPVSSGTTLSNARL GHVAPPPSKRICIGTPNLVPPVPVATAPPPPAESLSIEQNVGDSSSESSD NSVVLRPSTSSSSLVAAAEGSGDKPSKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ptpa-PA | 398 | CG3289-PA | 1..398 | 31..428 | 2063 | 100 | Plus |
CG2104-PB | 424 | CG2104-PB | 26..338 | 48..355 | 689 | 43.8 | Plus |
CG2104-PA | 424 | CG2104-PA | 26..338 | 48..355 | 689 | 43.8 | Plus |
CG8509-PA | 432 | CG8509-PA | 29..338 | 47..351 | 577 | 39.7 | Plus |
Translation from 91 to 1287
> GH04025.pep MASGINQAAGKLPAIAKKVQNLGDMGVWQKSRAFHDLIGYINGTSSAIQG IKTTDEIFESEMLKKLLRLFDALEKLVEQNPPLEQPQRFGNKAYRDWAQA MRELLPELLEQLLPDDKKRYQVELGQYLTESFGNATRIDYGTGHELSFLF FLCSLFKAEILQERDIVSAALRLFNRYLELARQLQRTYNMEPAGSQGVWS LDDFQFVPFIWGSAQLAVKSPFDPSKFVDEAIITEYKDHFMFISCIDYIC KVKTGHFGEHSNQLWSITDVPTWAKINAGLVKMYQKEILSKFPVIQHVYF GELMTFEPVSSGTTLSNARLGHVAPPPSKRICIGTPNLVPPVPVATAPPP PAESLSIEQNVGDSSSESSDNSVVLRPSTSSSSLVAAAEGSGDKPSKE*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF14182-PA | 408 | GF14182-PA | 1..394 | 1..397 | 1679 | 80.9 | Plus |
Dana\GF18653-PA | 408 | GF18653-PA | 28..342 | 18..325 | 681 | 43 | Plus |
Dana\GF19862-PA | 441 | GF19862-PA | 28..337 | 16..320 | 558 | 38.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24936-PA | 398 | GG24936-PA | 1..398 | 1..398 | 1790 | 93.7 | Plus |
Dere\GG10885-PA | 533 | GG10885-PA | 26..338 | 18..325 | 737 | 44.1 | Plus |
Dere\GG17918-PA | 434 | GG17918-PA | 28..338 | 16..321 | 561 | 38.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10556-PA | 404 | GH10556-PA | 1..393 | 1..398 | 1440 | 73.4 | Plus |
Dgri\GH12521-PA | 456 | GH12521-PA | 25..340 | 17..305 | 409 | 32.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Ptpa-PA | 398 | CG3289-PA | 1..398 | 1..398 | 2063 | 100 | Plus |
CG2104-PB | 424 | CG2104-PB | 26..338 | 18..325 | 689 | 43.8 | Plus |
CG2104-PA | 424 | CG2104-PA | 26..338 | 18..325 | 689 | 43.8 | Plus |
CG8509-PA | 432 | CG8509-PA | 29..338 | 17..321 | 577 | 39.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI16785-PA | 408 | GI16785-PA | 11..394 | 11..396 | 1456 | 77 | Plus |
Dmoj\GI14874-PA | 499 | GI14874-PA | 27..340 | 15..306 | 510 | 36 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL18611-PA | 406 | GL18611-PA | 1..394 | 1..393 | 1558 | 77.5 | Plus |
Dper\GL23018-PA | 414 | GL23018-PA | 38..400 | 24..376 | 808 | 43.1 | Plus |
Dper\GL15320-PA | 448 | GL15320-PA | 32..342 | 17..322 | 571 | 37.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17193-PA | 385 | GA17193-PA | 1..373 | 1..393 | 1413 | 72.4 | Plus |
Dpse\GA15244-PA | 424 | GA15244-PA | 38..353 | 24..331 | 800 | 45.3 | Plus |
Dpse\GA28794-PA | 451 | GA28794-PA | 32..342 | 17..322 | 562 | 37.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM18413-PA | 398 | GM18413-PA | 1..398 | 1..398 | 1845 | 96 | Plus |
Dsec\GM10599-PA | 460 | GM10599-PA | 26..338 | 18..325 | 709 | 42.8 | Plus |
Dsec\GM22587-PA | 343 | GM22587-PA | 28..335 | 16..318 | 584 | 39.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD23225-PA | 398 | GD23225-PA | 1..398 | 1..398 | 1829 | 95.2 | Plus |
Dsim\GD19589-PA | 426 | GD19589-PA | 26..338 | 18..325 | 708 | 43.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17193-PA | 424 | GJ17193-PA | 1..389 | 1..386 | 1515 | 77.9 | Plus |
Dvir\GJ19538-PA | 505 | GJ19538-PA | 14..339 | 2..306 | 522 | 35.7 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK15526-PA | 411 | GK15526-PA | 6..395 | 9..396 | 1478 | 77.2 | Plus |
Dwil\GK14079-PA | 462 | GK14079-PA | 25..345 | 18..329 | 813 | 46.6 | Plus |
Dwil\GK25681-PA | 536 | GK25681-PA | 27..343 | 17..321 | 593 | 37.3 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE18228-PA | 398 | GE18228-PA | 1..398 | 1..398 | 1833 | 92 | Plus |
Dyak\GE24145-PA | 425 | GE24145-PA | 26..338 | 18..325 | 735 | 45.3 | Plus |
Dyak\GE17226-PA | 436 | GE17226-PA | 28..338 | 16..321 | 594 | 38.7 | Plus |