BDGP Sequence Production Resources |
Search the DGRC for GH04035
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 40 |
Well: | 35 |
Vector: | pOT2 |
Associated Gene/Transcript | CG7560-RA |
Protein status: | GH04035.pep: gold |
Preliminary Size: | 1082 |
Sequenced Size: | 1125 |
Gene | Date | Evidence |
---|---|---|
CG7560 | 2002-01-01 | Sim4 clustering to Release 2 |
CG7560 | 2002-05-18 | Blastp of sequenced clone |
CG7560 | 2003-01-01 | Sim4 clustering to Release 3 |
CG7560 | 2008-04-29 | Release 5.5 accounting |
CG7560 | 2008-08-15 | Release 5.9 accounting |
CG7560 | 2008-12-18 | 5.12 accounting |
1125 bp (1125 high quality bases) assembled on 2002-05-18
GenBank Submission: AY118732
> GH04035.complete TTGAGCGAGCGTGGTTCCAAATCAATGCATGCGATTCAAGTGCCCGCCGG TGGTTCGTCGCCTGGTGCTGCCTCCTACATTCCCTGCGTGACCTTTGCCC CCGATCAAAATGAATCCGTAGTGACGAAGCAGCGGATAGGAACGCTCGTG GCGGAGCGAACAGCCCAACATCGCCTCTTCTACGGCATCGAGGTGATGGC CAGCGATCCGAGTGGCCGGCCAACCTGCCTGGACTTTAATCACTTCCTGC CGCTCCTGCCCACCTTCGTGAGCTTCGTTTGGCTGAGTCAGCGGTACTGG GACGTGGAGCCAGTGGGTCAGGTGGAGAGCCTTCAGATGGCCCAACACCT GGCCACACGCATTCCCGTGCTGCCCCATGTGTCCGCCTATCGAATGAGTA GGCAGCGACTGGATCAGTTTTTGGCCCTCAACTTTAGCAGTCTTTTGGCC GTTCGAGGGGATCGAGTTCACGAGGATCAGGATTTCTCGATTAGCTACCC CATGGTGGAGCAATCGATACGGCAGAGGGGTGAAACAATATCAGTCTGTG TGGGTGGATATCCAGAGGGATACACTAGTTTAGGCGACATACCACAAAAT TCAGCTAAGAACATGGAGTTTCTAAAGGCAAAGATTGATGCTGGAGCAGA TTGCATTATCACACAGTTATGCTACCGTCCCGAGGTCATAGTGCAATTTG TGAAGGACTGTCGAGCAGCTGGAATCTCGGTACCCATTGTTGTGGGACTG ATGTCGCATGAATCCTTTCGCTCCTACTCAATGATCGAGCAAATAACCGG CGTCCATCTGCCAGATGATTTGCGAGAGCAACTCGATCAGCTGCATAGTG CCCATATGAAGGATATGAAGTCTGACCAAGATCTGATAAGAAGGTTCTTT GTTAGCCTCACCGTCCGAACGATTCGTAATGTTTTGGATGCCGATGTGGG GGTTTGGGGCTTCCACTTCTTCACACTCAACCGCTTTAAGTCCGTCCAGG CTGTGCTGCAAGAACTTCGAGATCTGGATCTGTTAAAGGATTCTGAAAAG GATAAGAAAGGCTACGAAAAGTGATCATATGTCAGAAGCTAATAAAATTA ATTTGATAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr3L | 24539361 | chr3L | 11415937..11416468 | 1..532 | 2525 | 98.3 | Plus |
chr3L | 24539361 | chr3L | 11416698..11417173 | 632..1107 | 2290 | 98.7 | Plus |
chr3L | 24539361 | chr3L | 11416531..11416632 | 532..633 | 480 | 98 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28110227 | 3L | 11425158..11425689 | 1..532 | 2660 | 100 | Plus |
3L | 28110227 | 3L | 11425920..11426398 | 632..1110 | 2395 | 100 | Plus |
3L | 28110227 | 3L | 11425753..11425854 | 532..633 | 510 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
3L | 28103327 | 3L | 11418258..11418789 | 1..532 | 2660 | 100 | Plus |
3L | 28103327 | 3L | 11419020..11419498 | 632..1110 | 2395 | 100 | Plus |
3L | 28103327 | 3L | 11418853..11418954 | 532..633 | 510 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr3L | 11415937..11416468 | 1..532 | 98 | -> | Plus |
chr3L | 11416532..11416632 | 533..633 | 98 | -> | Plus |
chr3L | 11416700..11417173 | 634..1107 | 98 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 1..1050 | 25..1074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 1..1050 | 25..1074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 1..1050 | 25..1074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 1..1050 | 25..1074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 1..1050 | 25..1074 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 9..1115 | 1..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 9..1115 | 1..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 1..1107 | 1..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 9..1115 | 1..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG7560-RA | 1..1107 | 1..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11425158..11425689 | 1..532 | 100 | -> | Plus |
3L | 11425754..11425854 | 533..633 | 100 | -> | Plus |
3L | 11425922..11426395 | 634..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11425158..11425689 | 1..532 | 100 | -> | Plus |
3L | 11425754..11425854 | 533..633 | 100 | -> | Plus |
3L | 11425922..11426395 | 634..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11425158..11425689 | 1..532 | 100 | -> | Plus |
3L | 11425754..11425854 | 533..633 | 100 | -> | Plus |
3L | 11425922..11426395 | 634..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_3L | 11418854..11418954 | 533..633 | 100 | -> | Plus |
arm_3L | 11418258..11418789 | 1..532 | 100 | -> | Plus |
arm_3L | 11419022..11419495 | 634..1107 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
3L | 11418258..11418789 | 1..532 | 100 | -> | Plus |
3L | 11418854..11418954 | 533..633 | 100 | -> | Plus |
3L | 11419022..11419495 | 634..1107 | 100 | Plus |
Translation from 1 to 1073
> GH04035.hyp LSERGSKSMHAIQVPAGGSSPGAASYIPCVTFAPDQNESVVTKQRIGTLV AERTAQHRLFYGIEVMASDPSGRPTCLDFNHFLPLLPTFVSFVWLSQRYW DVEPVGQVESLQMAQHLATRIPVLPHVSAYRMSRQRLDQFLALNFSSLLA VRGDRVHEDQDFSISYPMVEQSIRQRGETISVCVGGYPEGYTSLGDIPQN SAKNMEFLKAKIDAGADCIITQLCYRPEVIVQFVKDCRAAGISVPIVVGL MSHESFRSYSMIEQITGVHLPDDLREQLDQLHSAHMKDMKSDQDLIRRFF VSLTVRTIRNVLDADVGVWGFHFFTLNRFKSVQAVLQELRDLDLLKDSEK DKKGYEK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7560-PA | 349 | CG7560-PA | 1..349 | 9..357 | 1809 | 100 | Plus |
Translation from 24 to 1073
> GH04035.pep MHAIQVPAGGSSPGAASYIPCVTFAPDQNESVVTKQRIGTLVAERTAQHR LFYGIEVMASDPSGRPTCLDFNHFLPLLPTFVSFVWLSQRYWDVEPVGQV ESLQMAQHLATRIPVLPHVSAYRMSRQRLDQFLALNFSSLLAVRGDRVHE DQDFSISYPMVEQSIRQRGETISVCVGGYPEGYTSLGDIPQNSAKNMEFL KAKIDAGADCIITQLCYRPEVIVQFVKDCRAAGISVPIVVGLMSHESFRS YSMIEQITGVHLPDDLREQLDQLHSAHMKDMKSDQDLIRRFFVSLTVRTI RNVLDADVGVWGFHFFTLNRFKSVQAVLQELRDLDLLKDSEKDKKGYEK*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF25261-PA | 320 | GF25261-PA | 1..320 | 1..337 | 901 | 51 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG15499-PA | 349 | GG15499-PA | 1..349 | 1..349 | 1600 | 86.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH16646-PA | 387 | GH16646-PA | 48..381 | 1..343 | 715 | 40.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG7560-PA | 349 | CG7560-PA | 1..349 | 1..349 | 1809 | 100 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI11604-PA | 384 | GI11604-PA | 44..379 | 1..343 | 739 | 41.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL22784-PA | 371 | GL22784-PA | 270..367 | 234..339 | 269 | 50 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA20440-PA | 433 | GA20440-PA | 102..429 | 1..339 | 944 | 53.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM25270-PA | 349 | GM25270-PA | 1..349 | 1..349 | 1755 | 93.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD14304-PA | 349 | GD14304-PA | 1..349 | 1..349 | 1745 | 92.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ11283-PA | 390 | GJ11283-PA | 67..388 | 13..346 | 823 | 48.1 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK17165-PA | 318 | GK17165-PA | 3..318 | 7..338 | 768 | 44.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE21809-PA | 345 | GE21809-PA | 1..345 | 1..343 | 1599 | 86.7 | Plus |