BDGP Sequence Production Resources |
Search the DGRC for GH04039
Library: | GH |
Tissue Source: | Drosophila melanogaster head |
Created by: | Ling Hong |
Date Registered: | 1998-06-02 |
Comments: | Sized fractionated cDNAs were directly ligated into pOT2. Plasmid cDNA library. |
Original Plate Number: | 40 |
Well: | 39 |
Vector: | pOT2 |
Associated Gene/Transcript | CG3625-RB |
Protein status: | GH04039.pep: gold |
Preliminary Size: | 1530 |
Sequenced Size: | 1343 |
Gene | Date | Evidence |
---|---|---|
CG3625 | 2001-01-01 | Release 2 assignment |
CG3625 | 2001-10-10 | Blastp of sequenced clone |
CG3625 | 2003-01-01 | Sim4 clustering to Release 3 |
CG3625 | 2008-04-29 | Release 5.5 accounting |
CG3625 | 2008-08-15 | Release 5.9 accounting |
CG3625 | 2008-12-18 | 5.12 accounting |
1343 bp (1343 high quality bases) assembled on 2001-10-10
GenBank Submission: AY060615
> GH04039.complete CGACAGACCAGACCGGTTTGTTTGTGTTTTGGTGCCGTGAAAAATCAATC GAGAGCAGAGCAGCTGCAGCAGGAAAATGGCATCCGTGCGAGGCAACTCC GTGTACCAGGGCGTCTACGGGGCTCTGAGGACCCTGCTCCACCTGACGGC AGTCGTGCAATTTGGCTACGGCATCTATTACGACTACAACTACGTGCAGT TCCCCACCAGCGAGCCAGAGATGAGGATCCATCATCCCTGGGGGGGCAAA TTCAAATACCTAACGTTCCTGGATGCGATAATTCAGGCACTGTACTATAT TGTATCGCTGGTCAACGATTTCGTGGGCACTAATGAGCTGACACCCAAGA AACCTCCGGCGGTTCGCAGGTTCAAGGACTGGCTGATGGCTACATTGGCC TTTCCAGTGGCTATCAATGTGGGCGTGACCTTCTGGACACTGTACGCTAT CGACAGGGAGCTAGTCTTCCCCAAGGTTCTGGACCCCGTGTTCCCCAGCT GGCTCAACCACGTCCTGCACACCAACATAGTGGTTTTCATCATCCTGGAG CTGTTCATCTCGTACAGGTCGTACCCAAAACGAAGCCAAGGACTCGCAGG ACTGGCCATTTTCATGGGCGCCTACCTGGTTTGGATTCACGTGGTGAAGC ACTACTCGGGTGTGTGGGTGTATCCAGTGCTCGAGGTTCTCCAGCTTCCG CAACGCATCCTGTTTTTTGCGGCCGTCGTTGGATTCACGCTGTCACTTTA CCTGCTGGGCGAGTTCCTCAACAATACCGTCTGGGCCAAGGAAGTGAAGT TGGCCAAGCGCAAATCCAACTAGGAGGCTGTGACCCGTTTCTGTTCGATG TAGTTGCGTTAATTAGCCACAAAATACAAATAGTGATTGACAGGTCTCGA TTATACATTTTGCTCATATTGTTCGATCTTCTCAGCCAAAGAAATTTTTC ATAAGTATGTAAAATCGTACTGCAAAGTTAACTGAAGAAGGCGTACAAAA TATGTGAGAAATAATAAACGAAACTTGAAACATCAACTCGATAATATATT TTCCAGTAATATTGAATTCGGAGTCTTTAATCATAATATGGAAACCCGTT TGCTAATGATATTCATTATATTTTTATTACGCATACATTGTAACTGAAAT TATAGCCGTAGTTTCCATTGAGCGCGCGCGTCTTTCGATAAGTTTACTAG ACTAACCAAAATACAAAAATGCCTTCTCGATTAAACTTCTCATATCAAGC ACACTGATTCAACGCCATCTTTGAATACCACTGTTATTCAATTCTAGTAC CATAATAAAGCGATTAAACTCTTAAAAAAAAAAAAAAAAAAAA
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
chr2L | 23010047 | chr2L | 283417..284249 | 1323..496 | 3975 | 99 | Minus |
chr2L | 23010047 | chr2L | 285464..285745 | 282..1 | 1380 | 99.3 | Minus |
chr2L | 23010047 | chr2L | 284784..285005 | 498..277 | 1095 | 99.5 | Minus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
412 | 7567 | 412 412 7567bp | 1684..1814 | 931..1068 | 123 | 60.7 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
chr2L | 284784..285004 | 278..498 | 99 | <- | Minus |
chr2L | 283417..284246 | 499..1323 | 99 | <- | Minus |
chr2L | 285469..285745 | 1..277 | 99 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 1..747 | 77..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 1..747 | 77..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 1..747 | 77..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 1..747 | 77..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 1..747 | 77..823 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 68..1390 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 68..1390 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 18..1340 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 68..1390 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
CG3625-RB | 18..1340 | 1..1323 | 100 | Plus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 283386..284210 | 499..1323 | 100 | <- | Minus |
2L | 284748..284968 | 278..498 | 100 | <- | Minus |
2L | 285433..285709 | 1..277 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 283386..284210 | 499..1323 | 100 | <- | Minus |
2L | 284748..284968 | 278..498 | 100 | <- | Minus |
2L | 285433..285709 | 1..277 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 283386..284210 | 499..1323 | 100 | <- | Minus |
2L | 284748..284968 | 278..498 | 100 | <- | Minus |
2L | 285433..285709 | 1..277 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
arm_2L | 283386..284210 | 499..1323 | 100 | <- | Minus |
arm_2L | 284748..284968 | 278..498 | 100 | <- | Minus |
arm_2L | 285433..285709 | 1..277 | 100 | Minus |
Subject | Subject Range | Query Range | Percent | Splice | Strand |
---|---|---|---|---|---|
2L | 283386..284210 | 499..1323 | 100 | <- | Minus |
2L | 284748..284968 | 278..498 | 100 | <- | Minus |
2L | 285433..285709 | 1..277 | 100 | Minus |
Translation from 76 to 822
> GH04039.hyp MASVRGNSVYQGVYGALRTLLHLTAVVQFGYGIYYDYNYVQFPTSEPEMR IHHPWGGKFKYLTFLDAIIQALYYIVSLVNDFVGTNELTPKKPPAVRRFK DWLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTN IVVFIILELFISYRSYPKRSQGLAGLAIFMGAYLVWIHVVKHYSGVWVYP VLEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3625-PB | 248 | CG3625-PB | 1..248 | 1..248 | 1308 | 100 | Plus |
CG3625-PA | 245 | CG3625-PA | 8..245 | 3..248 | 1049 | 84.1 | Plus |
CG3625-PE | 247 | CG3625-PE | 14..247 | 19..248 | 998 | 84.2 | Plus |
CG3625-PC | 247 | CG3625-PC | 14..247 | 19..248 | 998 | 84.2 | Plus |
CG11601-PC | 275 | CG11601-PC | 29..270 | 7..246 | 638 | 48.4 | Plus |
Translation from 76 to 822
> GH04039.pep MASVRGNSVYQGVYGALRTLLHLTAVVQFGYGIYYDYNYVQFPTSEPEMR IHHPWGGKFKYLTFLDAIIQALYYIVSLVNDFVGTNELTPKKPPAVRRFK DWLMATLAFPVAINVGVTFWTLYAIDRELVFPKVLDPVFPSWLNHVLHTN IVVFIILELFISYRSYPKRSQGLAGLAIFMGAYLVWIHVVKHYSGVWVYP VLEVLQLPQRILFFAAVVGFTLSLYLLGEFLNNTVWAKEVKLAKRKSN*
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dana\GF24926-PA | 250 | GF24926-PA | 1..250 | 1..248 | 1200 | 92 | Plus |
Dana\GF24937-PA | 275 | GF24937-PA | 29..271 | 7..247 | 640 | 49 | Plus |
Dana\GF24553-PA | 310 | GF24553-PA | 14..227 | 18..239 | 536 | 45 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dere\GG24663-PA | 248 | GG24663-PA | 1..248 | 1..248 | 1274 | 97.6 | Plus |
Dere\GG24665-PA | 275 | GG24665-PA | 29..271 | 7..247 | 623 | 48.2 | Plus |
Dere\GG13922-PA | 236 | GG13922-PA | 11..233 | 18..248 | 512 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dgri\GH10220-PA | 252 | GH10220-PA | 9..252 | 7..248 | 1033 | 77.5 | Plus |
Dgri\GH11507-PA | 277 | GH11507-PA | 29..273 | 7..247 | 571 | 48.6 | Plus |
Dgri\GH23361-PA | 129 | GH23361-PA | 9..129 | 18..149 | 270 | 36.4 | Plus |
Dgri\GH14847-PA | 129 | GH14847-PA | 9..129 | 18..149 | 265 | 36.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
CG3625-PB | 248 | CG3625-PB | 1..248 | 1..248 | 1308 | 100 | Plus |
CG3625-PA | 245 | CG3625-PA | 8..245 | 3..248 | 1049 | 84.1 | Plus |
CG3625-PE | 247 | CG3625-PE | 14..247 | 19..248 | 998 | 84.2 | Plus |
CG3625-PC | 247 | CG3625-PC | 14..247 | 19..248 | 998 | 84.2 | Plus |
CG11601-PC | 275 | CG11601-PC | 29..270 | 7..246 | 638 | 48.4 | Plus |
CG11601-PB | 275 | CG11601-PB | 29..270 | 7..246 | 638 | 48.4 | Plus |
CG11601-PA | 275 | CG11601-PA | 29..270 | 7..246 | 638 | 48.4 | Plus |
CG6149-PB | 234 | CG6149-PB | 11..223 | 18..238 | 527 | 43.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dmoj\GI15038-PA | 252 | GI15038-PA | 4..252 | 2..248 | 1050 | 77.5 | Plus |
Dmoj\GI17003-PA | 275 | GI17003-PA | 29..270 | 7..246 | 627 | 47.1 | Plus |
Dmoj\GI13700-PA | 223 | GI13700-PA | 7..218 | 20..239 | 358 | 38.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dper\GL25826-PA | 249 | GL25826-PA | 3..249 | 2..248 | 1177 | 87.9 | Plus |
Dper\GL25827-PA | 114 | GL25827-PA | 3..99 | 141..237 | 276 | 50.5 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dpse\GA17568-PA | 249 | GA17568-PA | 3..249 | 2..248 | 1183 | 88.7 | Plus |
Dpse\GA11092-PA | 277 | GA11092-PA | 29..260 | 7..237 | 611 | 47.4 | Plus |
Dpse\GA19393-PA | 239 | GA19393-PA | 3..234 | 5..246 | 522 | 43.8 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsec\GM16682-PA | 245 | GM16682-PA | 17..245 | 12..248 | 1028 | 85.7 | Plus |
Dsec\GM13272-PA | 141 | GM13272-PA | 1..140 | 1..140 | 738 | 99.3 | Plus |
Dsec\GM16683-PA | 275 | GM16683-PA | 29..271 | 7..247 | 624 | 48.2 | Plus |
Dsec\GM24755-PA | 296 | GM24755-PA | 71..293 | 18..248 | 483 | 42 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dsim\GD22970-PA | 245 | GD22970-PA | 17..245 | 12..248 | 1028 | 85.7 | Plus |
Dsim\GD22971-PA | 275 | GD22971-PA | 29..271 | 7..247 | 624 | 48.2 | Plus |
Dsim\GD12806-PA | 296 | GD12806-PA | 71..293 | 18..248 | 516 | 42.4 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dvir\GJ17242-PA | 251 | GJ17242-PA | 1..251 | 1..248 | 1065 | 78.5 | Plus |
Dvir\GJ24281-PA | 275 | GJ24281-PA | 29..271 | 7..247 | 646 | 49 | Plus |
Dvir\GJ14040-PA | 228 | GJ14040-PA | 13..224 | 17..236 | 529 | 43.6 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dwil\GK14825-PA | 257 | GK14825-PA | 7..257 | 2..248 | 1110 | 82.5 | Plus |
Dwil\GK14826-PA | 275 | GK14826-PA | 29..271 | 7..247 | 629 | 49.2 | Plus |
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
---|---|---|---|---|---|---|---|
Dyak\GE16272-PA | 248 | GE16272-PA | 1..248 | 1..248 | 1277 | 97.6 | Plus |
Dyak\GE16283-PA | 275 | GE16283-PA | 29..271 | 7..247 | 618 | 47.8 | Plus |
Dyak\GE20218-PA | 229 | GE20218-PA | 11..217 | 18..232 | 468 | 43.7 | Plus |